Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15780

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,066,723	-				-1.7
4,066,733	+				+0.9
4,066,734	-				+2.3
4,066,755	+				-1.4
4,066,926	+		ABI39_RS15775	0.31	-1.4
4,066,946	+		ABI39_RS15775	0.34	-0.1
4,066,970	-		ABI39_RS15775	0.37	-0.7
4,067,045	-		ABI39_RS15775	0.48	+1.5
4,067,557	-				-0.1
4,067,573	-				-0.9
4,067,627	-				-3.2
4,067,702	-				-0.3
4,067,713	-				+0.3
4,067,803	-		ABI39_RS15780	0.46	+0.4
4,067,847	-		ABI39_RS15780	0.69	+0.9
4,067,892	-				-0.0
4,067,892	-				-0.8
4,068,459	-		ABI39_RS23100	0.51	-0.9
4,068,461	-		ABI39_RS23100	0.53	+0.3
4,068,488	-		ABI39_RS23100	0.68	-0.4
4,068,523	+		ABI39_RS23100	0.88	-0.7
4,068,713	-		ABI39_RS15790	0.16	+0.8
4,068,736	+		ABI39_RS15790	0.18	+2.7
4,068,764	+		ABI39_RS15790	0.20	+0.2