Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12555

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,295,775	+		ABI39_RS12545	0.76	+0.8
3,295,775	+		ABI39_RS12545	0.76	+1.7
3,295,776	-		ABI39_RS12545	0.76	+0.4
3,295,781	+		ABI39_RS12545	0.77	+2.1
3,295,860	+		ABI39_RS12545	0.86	+0.8
3,296,009	-				-1.6
3,296,120	-		ABI39_RS12550	0.17	-0.6
3,296,176	+		ABI39_RS12550	0.25	-0.0
3,296,178	+		ABI39_RS12550	0.25	+1.0
3,296,208	+		ABI39_RS12550	0.30	-1.0
3,296,385	-		ABI39_RS12550	0.56	+1.0
3,296,583	-		ABI39_RS12550	0.85	+0.1
3,296,583	-		ABI39_RS12550	0.85	+0.3
3,296,588	-		ABI39_RS12550	0.86	-0.6
3,296,612	+		ABI39_RS12550	0.90	-0.5
3,296,614	+				+1.3
3,296,614	+				-1.0
3,296,678	+				-1.8
3,296,690	+				+0.3
3,296,741	-				+1.5
3,296,830	+		ABI39_RS12555	0.11	+0.5
3,296,831	-		ABI39_RS12555	0.11	+0.7
3,296,833	-		ABI39_RS12555	0.12	+1.0
3,296,867	+		ABI39_RS12555	0.15	-0.2
3,296,868	-		ABI39_RS12555	0.15	+0.1
3,296,894	-		ABI39_RS12555	0.18	+1.0
3,296,916	+		ABI39_RS12555	0.20	+1.7
3,297,184	-		ABI39_RS12555	0.46	+0.6
3,297,268	+		ABI39_RS12555	0.54	+0.6
3,297,288	+		ABI39_RS12555	0.56	+1.2
3,297,457	+		ABI39_RS12555	0.72	+0.7
3,297,464	+		ABI39_RS12555	0.73	-0.3
3,297,588	-		ABI39_RS12555	0.85	-0.2
3,297,603	+		ABI39_RS12555	0.86	-1.2
3,297,614	-		ABI39_RS12555	0.88	+1.2
3,297,619	+		ABI39_RS12555	0.88	-0.1
3,297,620	-		ABI39_RS12555	0.88	-0.3
3,297,633	+		ABI39_RS12555	0.89	-1.2
3,297,780	-				+0.5
3,297,783	-				-0.0
3,297,811	-				+0.6
3,297,845	-				+0.2
3,297,875	+				-0.7
3,297,877	+				-2.4
3,297,878	-				-1.3
3,297,880	-				+0.7
3,298,074	-				-0.1
3,298,077	+				+0.1
3,298,117	+				+1.8
3,298,176	+				+0.2
3,298,198	+				-1.7
3,298,230	+				-0.6
3,298,265	+				+1.8
3,298,288	+				+0.6
3,298,308	+				-1.4
3,298,312	-				-1.2
3,298,312	-				-1.2
3,298,354	+				-1.2
3,298,519	+		ABI39_RS12560	0.21	-0.0
3,298,587	+		ABI39_RS12560	0.27	-0.4
3,298,588	-		ABI39_RS12560	0.27	-0.6
3,298,588	-		ABI39_RS12560	0.27	-1.1
3,298,652	+		ABI39_RS12560	0.34	-0.9
3,298,672	+		ABI39_RS12560	0.36	-0.2
3,298,673	-		ABI39_RS12560	0.36	-1.6
3,298,677	-		ABI39_RS12560	0.36	-0.4