Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08490

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,263,307	+		ABI39_RS08475	0.12	+0.4
2,263,308	-		ABI39_RS08475	0.13	-0.7
2,263,321	+		ABI39_RS08475	0.16	-0.3
2,263,363	+		ABI39_RS08475	0.26	+1.2
2,263,363	+		ABI39_RS08475	0.26	-0.6
2,263,427	+		ABI39_RS08475	0.42	+0.1
2,263,438	+		ABI39_RS08475	0.45	+1.0
2,263,439	-		ABI39_RS08475	0.45	+0.5
2,263,504	-		ABI39_RS08475	0.61	+1.2
2,263,504	-		ABI39_RS08475	0.61	-0.2
2,263,591	+		ABI39_RS08475	0.83	-0.5
2,263,604	+		ABI39_RS08475	0.86	-0.7
2,263,620	+				+0.6
2,263,621	-				+0.9
2,263,717	+		ABI39_RS08480	0.32	-0.9
2,263,950	-		ABI39_RS08485	0.13	+0.5
2,264,059	-		ABI39_RS08485	0.40	+0.9
2,264,086	-		ABI39_RS08485	0.47	+0.1
2,264,201	+		ABI39_RS08485	0.75	+0.1
2,264,260	+		ABI39_RS08485	0.90	-0.0
2,264,260	+		ABI39_RS08485	0.90	-1.2
2,264,299	+				+0.2
2,264,355	-				-0.6
2,264,384	-				-1.0
2,264,487	+		ABI39_RS08490	0.15	-0.3
2,264,505	+		ABI39_RS08490	0.17	-0.6
2,264,507	+		ABI39_RS08490	0.17	+1.0
2,264,536	-		ABI39_RS08490	0.19	-0.4
2,264,563	-		ABI39_RS08490	0.21	-1.1
2,264,697	-		ABI39_RS08490	0.32	+1.3
2,264,742	+		ABI39_RS08490	0.36	+0.8
2,264,783	+		ABI39_RS08490	0.39	-0.1
2,264,802	+		ABI39_RS08490	0.41	-0.8
2,264,951	-		ABI39_RS08490	0.53	+2.5
2,264,970	+		ABI39_RS08490	0.54	-0.9
2,264,971	-		ABI39_RS08490	0.55	-0.2
2,265,107	+		ABI39_RS08490	0.66	-0.3
2,265,154	+		ABI39_RS08490	0.69	+0.4
2,265,215	+		ABI39_RS08490	0.74	-0.7
2,265,232	+		ABI39_RS08490	0.76	-2.1
2,265,240	+		ABI39_RS08490	0.76	+1.0
2,265,241	-		ABI39_RS08490	0.77	-1.0
2,265,262	+		ABI39_RS08490	0.78	-0.7
2,265,327	+		ABI39_RS08490	0.84	-0.1
2,265,418	+				-0.1
2,265,419	-				-1.0
2,265,419	-				+0.9
2,265,431	-				+0.9
2,265,507	+				+1.4
2,265,508	-				-0.6
2,265,512	+				-1.1
2,265,528	+				+2.0
2,265,910	+		ABI39_RS08495	0.15	-0.9
2,265,911	-		ABI39_RS08495	0.15	-0.4
2,265,915	+		ABI39_RS08495	0.15	-1.6
2,265,924	-		ABI39_RS08495	0.16	+0.5
2,265,949	+		ABI39_RS08495	0.18	+1.1
2,266,024	-		ABI39_RS08495	0.23	+0.3
2,266,024	-		ABI39_RS08495	0.23	+0.4
2,266,086	+		ABI39_RS08495	0.27	+0.6
2,266,140	-		ABI39_RS08495	0.31	-1.4
2,266,141	+		ABI39_RS08495	0.31	+0.7
2,266,142	-		ABI39_RS08495	0.31	+0.5
2,266,147	+		ABI39_RS08495	0.31	-3.0
2,266,148	-		ABI39_RS08495	0.32	+0.9
2,266,149	+		ABI39_RS08495	0.32	+0.5
2,266,151	+		ABI39_RS08495	0.32	+0.4
2,266,152	-		ABI39_RS08495	0.32	+1.2
2,266,152	-		ABI39_RS08495	0.32	+1.8
2,266,152	-		ABI39_RS08495	0.32	-0.7
2,266,205	-		ABI39_RS08495	0.36	+0.7
2,266,205	-		ABI39_RS08495	0.36	+1.0
2,266,227	+		ABI39_RS08495	0.37	-0.1
2,266,308	+		ABI39_RS08495	0.43	-0.4
2,266,313	-		ABI39_RS08495	0.43	+0.3
2,266,316	-		ABI39_RS08495	0.43	+1.3
2,266,362	+		ABI39_RS08495	0.47	+0.3
2,266,398	+		ABI39_RS08495	0.49	+1.0
2,266,439	+		ABI39_RS08495	0.52	+0.5
2,266,440	-		ABI39_RS08495	0.52	-1.5
2,266,444	-		ABI39_RS08495	0.52	+1.6
2,266,444	-		ABI39_RS08495	0.52	+0.5
2,266,511	-		ABI39_RS08495	0.57	+0.4