Strain Fitness in Escherichia coli ECRC101 around MCAODC_27755

Experiment: WM_RB68

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmalZ and proY are separated by 155 nucleotidesproY and brnQ are separated by 75 nucleotides MCAODC_27750: malZ - maltodextrin glucosidase, at 2,294,170 to 2,295,987 malZ MCAODC_27755: proY - proline-specific permease ProY, at 2,296,143 to 2,297,516 proY MCAODC_27760: brnQ - branched-chain amino acid transporter carrier protein BrnQ, at 2,297,592 to 2,298,911 brnQ Position (kb) 2296 2297 2298Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2295.290 kb on - strand, within malZat 2295.338 kb on + strand, within malZat 2295.353 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.358 kb on - strand, within malZat 2295.361 kb on + strand, within malZat 2295.361 kb on + strand, within malZat 2295.361 kb on + strand, within malZat 2295.362 kb on - strand, within malZat 2295.362 kb on - strand, within malZat 2295.461 kb on + strand, within malZat 2295.462 kb on - strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.579 kb on + strand, within malZat 2295.579 kb on + strand, within malZat 2295.579 kb on + strand, within malZat 2295.708 kb on + strand, within malZat 2295.709 kb on - strand, within malZat 2295.749 kb on + strand, within malZat 2295.749 kb on + strand, within malZat 2295.750 kb on - strand, within malZat 2295.831 kb on + strandat 2295.831 kb on + strandat 2295.870 kb on + strandat 2295.879 kb on + strandat 2295.879 kb on + strandat 2295.880 kb on - strandat 2295.880 kb on - strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.979 kb on + strandat 2295.979 kb on + strandat 2295.980 kb on - strandat 2295.980 kb on - strandat 2295.987 kb on + strandat 2295.988 kb on - strandat 2295.988 kb on - strandat 2296.023 kb on + strandat 2296.023 kb on + strandat 2296.024 kb on - strandat 2296.028 kb on + strandat 2296.028 kb on + strandat 2296.029 kb on - strandat 2296.029 kb on - strandat 2296.141 kb on + strandat 2296.141 kb on + strandat 2296.142 kb on - strandat 2296.144 kb on + strandat 2296.182 kb on - strandat 2296.228 kb on + strandat 2296.228 kb on + strandat 2296.229 kb on - strandat 2296.238 kb on + strandat 2296.275 kb on - strandat 2296.275 kb on - strandat 2296.329 kb on - strand, within proYat 2296.344 kb on - strand, within proYat 2296.397 kb on + strand, within proYat 2296.398 kb on - strand, within proYat 2296.468 kb on + strand, within proYat 2296.468 kb on + strand, within proYat 2296.469 kb on - strand, within proYat 2296.477 kb on + strand, within proYat 2296.478 kb on - strand, within proYat 2296.500 kb on - strand, within proYat 2296.584 kb on - strand, within proYat 2296.611 kb on + strand, within proYat 2296.612 kb on - strand, within proYat 2296.612 kb on - strand, within proYat 2296.612 kb on - strand, within proYat 2296.622 kb on + strand, within proYat 2296.622 kb on + strand, within proYat 2296.622 kb on + strand, within proYat 2296.623 kb on - strand, within proYat 2296.658 kb on + strand, within proYat 2296.679 kb on + strand, within proYat 2296.679 kb on + strand, within proYat 2296.688 kb on + strand, within proYat 2296.744 kb on + strand, within proYat 2296.745 kb on - strand, within proYat 2296.748 kb on + strand, within proYat 2296.749 kb on - strand, within proYat 2296.754 kb on + strand, within proYat 2296.754 kb on + strand, within proYat 2296.754 kb on + strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.777 kb on + strand, within proYat 2296.777 kb on + strand, within proYat 2296.777 kb on + strand, within proYat 2296.778 kb on - strand, within proYat 2296.809 kb on - strand, within proYat 2296.857 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.961 kb on + strand, within proYat 2297.175 kb on + strand, within proYat 2297.177 kb on + strand, within proYat 2297.177 kb on + strand, within proYat 2297.178 kb on - strand, within proYat 2297.178 kb on - strand, within proYat 2297.178 kb on - strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.179 kb on + strand, within proYat 2297.180 kb on + strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.180 kb on - strand, within proYat 2297.183 kb on + strand, within proYat 2297.216 kb on + strand, within proYat 2297.216 kb on + strand, within proYat 2297.234 kb on - strand, within proYat 2297.251 kb on + strand, within proYat 2297.251 kb on + strand, within proYat 2297.252 kb on - strand, within proYat 2297.312 kb on + strand, within proYat 2297.313 kb on - strand, within proYat 2297.348 kb on + strand, within proYat 2297.349 kb on - strand, within proYat 2297.349 kb on - strand, within proYat 2297.349 kb on - strand, within proYat 2297.349 kb on - strand, within proYat 2297.350 kb on + strand, within proYat 2297.350 kb on + strand, within proYat 2297.350 kb on + strand, within proYat 2297.351 kb on - strand, within proYat 2297.351 kb on - strand, within proYat 2297.372 kb on + strand, within proYat 2297.372 kb on + strand, within proYat 2297.373 kb on - strand, within proYat 2297.373 kb on - strand, within proYat 2297.373 kb on - strand, within proYat 2297.375 kb on - strand, within proYat 2297.426 kb on - strandat 2297.462 kb on + strandat 2297.463 kb on - strandat 2297.470 kb on - strandat 2297.470 kb on - strandat 2297.470 kb on - strandat 2297.480 kb on + strandat 2297.484 kb on + strandat 2297.497 kb on - strandat 2297.541 kb on - strandat 2297.593 kb on + strandat 2297.594 kb on - strandat 2297.594 kb on - strandat 2297.639 kb on + strandat 2297.639 kb on + strandat 2297.783 kb on + strand, within brnQat 2297.783 kb on + strand, within brnQat 2297.817 kb on - strand, within brnQat 2297.842 kb on - strand, within brnQat 2297.842 kb on - strand, within brnQat 2297.844 kb on + strand, within brnQat 2297.844 kb on + strand, within brnQat 2297.845 kb on - strand, within brnQat 2297.858 kb on + strand, within brnQat 2297.924 kb on + strand, within brnQat 2297.966 kb on + strand, within brnQat 2297.967 kb on - strand, within brnQat 2297.972 kb on - strand, within brnQat 2297.972 kb on - strand, within brnQat 2297.982 kb on + strand, within brnQat 2297.986 kb on + strand, within brnQat 2297.987 kb on - strand, within brnQat 2298.103 kb on + strand, within brnQat 2298.103 kb on + strand, within brnQat 2298.104 kb on - strand, within brnQat 2298.104 kb on - strand, within brnQat 2298.116 kb on + strand, within brnQat 2298.116 kb on + strand, within brnQat 2298.116 kb on + strand, within brnQat 2298.117 kb on - strand, within brnQat 2298.185 kb on - strand, within brnQat 2298.185 kb on - strand, within brnQat 2298.231 kb on - strand, within brnQat 2298.233 kb on - strand, within brnQat 2298.287 kb on + strand, within brnQat 2298.287 kb on + strand, within brnQat 2298.331 kb on + strand, within brnQat 2298.332 kb on - strand, within brnQ

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_RB68
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2,295,290 - malZ MCAODC_27750 0.62 -0.1
2,295,338 + malZ MCAODC_27750 0.64 +0.4
2,295,353 + malZ MCAODC_27750 0.65 +0.3
2,295,357 + malZ MCAODC_27750 0.65 +0.6
2,295,357 + malZ MCAODC_27750 0.65 +0.9
2,295,357 + malZ MCAODC_27750 0.65 +1.4
2,295,358 - malZ MCAODC_27750 0.65 -0.4
2,295,361 + malZ MCAODC_27750 0.66 +0.7
2,295,361 + malZ MCAODC_27750 0.66 +2.7
2,295,361 + malZ MCAODC_27750 0.66 +0.6
2,295,362 - malZ MCAODC_27750 0.66 -0.2
2,295,362 - malZ MCAODC_27750 0.66 +0.9
2,295,461 + malZ MCAODC_27750 0.71 -0.8
2,295,462 - malZ MCAODC_27750 0.71 +1.9
2,295,542 + malZ MCAODC_27750 0.75 -0.2
2,295,542 + malZ MCAODC_27750 0.75 +1.1
2,295,542 + malZ MCAODC_27750 0.75 -0.1
2,295,542 + malZ MCAODC_27750 0.75 -0.9
2,295,542 + malZ MCAODC_27750 0.75 -0.4
2,295,545 + malZ MCAODC_27750 0.76 -1.1
2,295,545 + malZ MCAODC_27750 0.76 +1.1
2,295,545 + malZ MCAODC_27750 0.76 -0.4
2,295,545 + malZ MCAODC_27750 0.76 +1.6
2,295,546 - malZ MCAODC_27750 0.76 -2.0
2,295,546 - malZ MCAODC_27750 0.76 -0.1
2,295,546 - malZ MCAODC_27750 0.76 +1.3
2,295,546 - malZ MCAODC_27750 0.76 -0.1
2,295,579 + malZ MCAODC_27750 0.78 -0.7
2,295,579 + malZ MCAODC_27750 0.78 +0.2
2,295,579 + malZ MCAODC_27750 0.78 -0.1
2,295,708 + malZ MCAODC_27750 0.85 +1.0
2,295,709 - malZ MCAODC_27750 0.85 +0.1
2,295,749 + malZ MCAODC_27750 0.87 +0.1
2,295,749 + malZ MCAODC_27750 0.87 +0.6
2,295,750 - malZ MCAODC_27750 0.87 +0.8
2,295,831 + -0.2
2,295,831 + +0.6
2,295,870 + +0.9
2,295,879 + -1.1
2,295,879 + +0.4
2,295,880 - +1.4
2,295,880 - +1.9
2,295,918 + -1.2
2,295,918 + -0.2
2,295,918 + -2.9
2,295,918 + +1.2
2,295,919 - +1.2
2,295,919 - +0.4
2,295,919 - +0.3
2,295,919 - -0.6
2,295,979 + +1.2
2,295,979 + -0.8
2,295,980 - +0.2
2,295,980 - +0.4
2,295,987 + +1.7
2,295,988 - -0.1
2,295,988 - -1.5
2,296,023 + +1.8
2,296,023 + +0.0
2,296,024 - +0.5
2,296,028 + -0.3
2,296,028 + +1.3
2,296,029 - +0.9
2,296,029 - +0.1
2,296,141 + +1.0
2,296,141 + -0.4
2,296,142 - +0.3
2,296,144 + +1.3
2,296,182 - +0.3
2,296,228 + -0.3
2,296,228 + +0.2
2,296,229 - +0.6
2,296,238 + -1.4
2,296,275 - +0.9
2,296,275 - -0.2
2,296,329 - proY MCAODC_27755 0.14 -0.4
2,296,344 - proY MCAODC_27755 0.15 +1.5
2,296,397 + proY MCAODC_27755 0.18 -0.9
2,296,398 - proY MCAODC_27755 0.19 +1.3
2,296,468 + proY MCAODC_27755 0.24 +0.9
2,296,468 + proY MCAODC_27755 0.24 +0.6
2,296,469 - proY MCAODC_27755 0.24 +0.4
2,296,477 + proY MCAODC_27755 0.24 +0.7
2,296,478 - proY MCAODC_27755 0.24 -0.1
2,296,500 - proY MCAODC_27755 0.26 +0.3
2,296,584 - proY MCAODC_27755 0.32 -1.4
2,296,611 + proY MCAODC_27755 0.34 +2.4
2,296,612 - proY MCAODC_27755 0.34 -0.5
2,296,612 - proY MCAODC_27755 0.34 +1.1
2,296,612 - proY MCAODC_27755 0.34 +0.0
2,296,622 + proY MCAODC_27755 0.35 +0.4
2,296,622 + proY MCAODC_27755 0.35 -1.1
2,296,622 + proY MCAODC_27755 0.35 +0.4
2,296,623 - proY MCAODC_27755 0.35 -0.1
2,296,658 + proY MCAODC_27755 0.37 -2.3
2,296,679 + proY MCAODC_27755 0.39 +0.0
2,296,679 + proY MCAODC_27755 0.39 +0.3
2,296,688 + proY MCAODC_27755 0.40 -0.6
2,296,744 + proY MCAODC_27755 0.44 -0.1
2,296,745 - proY MCAODC_27755 0.44 -0.5
2,296,748 + proY MCAODC_27755 0.44 -2.0
2,296,749 - proY MCAODC_27755 0.44 +1.0
2,296,754 + proY MCAODC_27755 0.44 +0.6
2,296,754 + proY MCAODC_27755 0.44 +0.1
2,296,754 + proY MCAODC_27755 0.44 -0.4
2,296,755 - proY MCAODC_27755 0.45 +2.2
2,296,755 - proY MCAODC_27755 0.45 +0.3
2,296,755 - proY MCAODC_27755 0.45 -0.4
2,296,755 - proY MCAODC_27755 0.45 +0.1
2,296,755 - proY MCAODC_27755 0.45 -1.0
2,296,755 - proY MCAODC_27755 0.45 -0.7
2,296,755 - proY MCAODC_27755 0.45 +0.3
2,296,755 - proY MCAODC_27755 0.45 +0.8
2,296,755 - proY MCAODC_27755 0.45 -0.1
2,296,777 + proY MCAODC_27755 0.46 +0.2
2,296,777 + proY MCAODC_27755 0.46 -0.0
2,296,777 + proY MCAODC_27755 0.46 -0.2
2,296,778 - proY MCAODC_27755 0.46 -0.5
2,296,809 - proY MCAODC_27755 0.48 +0.7
2,296,857 - proY MCAODC_27755 0.52 +0.4
2,296,912 - proY MCAODC_27755 0.56 +1.8
2,296,912 - proY MCAODC_27755 0.56 +0.5
2,296,912 - proY MCAODC_27755 0.56 +0.1
2,296,961 + proY MCAODC_27755 0.60 +1.3
2,297,175 + proY MCAODC_27755 0.75 +0.1
2,297,177 + proY MCAODC_27755 0.75 +0.4
2,297,177 + proY MCAODC_27755 0.75 -0.4
2,297,178 - proY MCAODC_27755 0.75 +0.1
2,297,178 - proY MCAODC_27755 0.75 +0.2
2,297,178 - proY MCAODC_27755 0.75 +0.4
2,297,179 + proY MCAODC_27755 0.75 -0.3
2,297,179 + proY MCAODC_27755 0.75 -0.7
2,297,179 + proY MCAODC_27755 0.75 -0.0
2,297,179 + proY MCAODC_27755 0.75 -0.4
2,297,179 + proY MCAODC_27755 0.75 -0.5
2,297,179 + proY MCAODC_27755 0.75 +0.8
2,297,179 + proY MCAODC_27755 0.75 +0.6
2,297,179 + proY MCAODC_27755 0.75 -1.0
2,297,179 + proY MCAODC_27755 0.75 -0.5
2,297,179 + proY MCAODC_27755 0.75 +0.2
2,297,179 + proY MCAODC_27755 0.75 +0.5
2,297,179 + proY MCAODC_27755 0.75 +1.3
2,297,179 + proY MCAODC_27755 0.75 +0.8
2,297,180 + proY MCAODC_27755 0.75 -0.4
2,297,180 - proY MCAODC_27755 0.75 +0.4
2,297,180 - proY MCAODC_27755 0.75 -0.9
2,297,180 - proY MCAODC_27755 0.75 +0.2
2,297,180 - proY MCAODC_27755 0.75 -0.5
2,297,180 - proY MCAODC_27755 0.75 +0.0
2,297,180 - proY MCAODC_27755 0.75 +0.2
2,297,180 - proY MCAODC_27755 0.75 -2.3
2,297,180 - proY MCAODC_27755 0.75 +1.9
2,297,180 - proY MCAODC_27755 0.75 +1.0
2,297,180 - proY MCAODC_27755 0.75 -0.1
2,297,180 - proY MCAODC_27755 0.75 +0.3
2,297,180 - proY MCAODC_27755 0.75 -0.5
2,297,180 - proY MCAODC_27755 0.75 -0.7
2,297,183 + proY MCAODC_27755 0.76 +0.9
2,297,216 + proY MCAODC_27755 0.78 +1.5
2,297,216 + proY MCAODC_27755 0.78 +0.2
2,297,234 - proY MCAODC_27755 0.79 -0.6
2,297,251 + proY MCAODC_27755 0.81 +0.4
2,297,251 + proY MCAODC_27755 0.81 +0.1
2,297,252 - proY MCAODC_27755 0.81 +0.5
2,297,312 + proY MCAODC_27755 0.85 +0.3
2,297,313 - proY MCAODC_27755 0.85 +1.3
2,297,348 + proY MCAODC_27755 0.88 +0.1
2,297,349 - proY MCAODC_27755 0.88 -1.2
2,297,349 - proY MCAODC_27755 0.88 +0.4
2,297,349 - proY MCAODC_27755 0.88 -0.6
2,297,349 - proY MCAODC_27755 0.88 +0.2
2,297,350 + proY MCAODC_27755 0.88 +0.8
2,297,350 + proY MCAODC_27755 0.88 -0.1
2,297,350 + proY MCAODC_27755 0.88 -0.7
2,297,351 - proY MCAODC_27755 0.88 -2.6
2,297,351 - proY MCAODC_27755 0.88 -1.3
2,297,372 + proY MCAODC_27755 0.89 +1.2
2,297,372 + proY MCAODC_27755 0.89 +0.3
2,297,373 - proY MCAODC_27755 0.90 -1.3
2,297,373 - proY MCAODC_27755 0.90 +0.8
2,297,373 - proY MCAODC_27755 0.90 -0.3
2,297,375 - proY MCAODC_27755 0.90 +0.3
2,297,426 - -2.6
2,297,462 + -1.2
2,297,463 - +0.7
2,297,470 - +0.4
2,297,470 - +0.9
2,297,470 - -0.2
2,297,480 + +0.7
2,297,484 + -1.3
2,297,497 - +0.6
2,297,541 - -0.6
2,297,593 + +2.1
2,297,594 - -0.3
2,297,594 - +0.4
2,297,639 + +0.4
2,297,639 + +0.0
2,297,783 + brnQ MCAODC_27760 0.14 -0.0
2,297,783 + brnQ MCAODC_27760 0.14 -0.4
2,297,817 - brnQ MCAODC_27760 0.17 -0.2
2,297,842 - brnQ MCAODC_27760 0.19 -1.0
2,297,842 - brnQ MCAODC_27760 0.19 +0.5
2,297,844 + brnQ MCAODC_27760 0.19 -1.4
2,297,844 + brnQ MCAODC_27760 0.19 -0.2
2,297,845 - brnQ MCAODC_27760 0.19 -0.1
2,297,858 + brnQ MCAODC_27760 0.20 -1.4
2,297,924 + brnQ MCAODC_27760 0.25 +0.1
2,297,966 + brnQ MCAODC_27760 0.28 +0.2
2,297,967 - brnQ MCAODC_27760 0.28 +1.7
2,297,972 - brnQ MCAODC_27760 0.29 +0.4
2,297,972 - brnQ MCAODC_27760 0.29 -0.8
2,297,982 + brnQ MCAODC_27760 0.30 -1.4
2,297,986 + brnQ MCAODC_27760 0.30 -0.9
2,297,987 - brnQ MCAODC_27760 0.30 -0.5
2,298,103 + brnQ MCAODC_27760 0.39 +0.3
2,298,103 + brnQ MCAODC_27760 0.39 -0.6
2,298,104 - brnQ MCAODC_27760 0.39 +0.8
2,298,104 - brnQ MCAODC_27760 0.39 -0.8
2,298,116 + brnQ MCAODC_27760 0.40 +0.4
2,298,116 + brnQ MCAODC_27760 0.40 +0.8
2,298,116 + brnQ MCAODC_27760 0.40 +0.1
2,298,117 - brnQ MCAODC_27760 0.40 +0.2
2,298,185 - brnQ MCAODC_27760 0.45 +0.1
2,298,185 - brnQ MCAODC_27760 0.45 -1.4
2,298,231 - brnQ MCAODC_27760 0.48 +0.1
2,298,233 - brnQ MCAODC_27760 0.49 -0.3
2,298,287 + brnQ MCAODC_27760 0.53 -0.7
2,298,287 + brnQ MCAODC_27760 0.53 +0.3
2,298,331 + brnQ MCAODC_27760 0.56 -0.4
2,298,332 - brnQ MCAODC_27760 0.56 -0.5

Or see this region's nucleotide sequence