Strain Fitness in Escherichia coli ECRC101 around MCAODC_24020

Experiment: WM_RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_RB68
1,530,307	+	rutC	MCAODC_24010	0.62	+1.5
1,530,360	-	rutC	MCAODC_24010	0.80	-0.6
1,530,411	-				+0.4
1,530,451	-				+0.1
1,530,497	+				+0.3
1,530,514	-				-0.6
1,530,650	+	rutD	MCAODC_24015	0.22	+1.2
1,530,656	-	rutD	MCAODC_24015	0.23	+2.3
1,530,819	+	rutD	MCAODC_24015	0.44	-0.1
1,530,820	-	rutD	MCAODC_24015	0.44	+0.9
1,530,862	-	rutD	MCAODC_24015	0.49	+0.4
1,530,866	+	rutD	MCAODC_24015	0.49	-1.2
1,531,003	-	rutD	MCAODC_24015	0.67	+0.7
1,531,016	-	rutD	MCAODC_24015	0.68	+0.1
1,531,211	-				-0.3
1,531,245	+				+0.2
1,531,245	+				-1.2
1,531,246	-				+1.0
1,531,246	-				+0.1
1,531,246	-				+1.1
1,531,246	-				-0.2
1,531,279	+				-0.1
1,531,280	-				-0.4
1,531,280	-				-0.2
1,531,421	-	rutE	MCAODC_24020	0.24	+0.5
1,531,421	-	rutE	MCAODC_24020	0.24	+0.3
1,531,421	-	rutE	MCAODC_24020	0.24	-1.8
1,531,421	-	rutE	MCAODC_24020	0.24	-0.2
1,531,421	-	rutE	MCAODC_24020	0.24	-0.8
1,531,438	+	rutE	MCAODC_24020	0.27	-0.8
1,531,438	+	rutE	MCAODC_24020	0.27	+1.1
1,531,740	+	rutE	MCAODC_24020	0.78	+0.4
1,531,741	-	rutE	MCAODC_24020	0.78	-0.0
1,531,789	+	rutE	MCAODC_24020	0.86	+0.5
1,531,789	+	rutE	MCAODC_24020	0.86	+3.0
1,531,792	+	rutE	MCAODC_24020	0.87	+0.2
1,531,868	+				+0.6
1,531,869	-				-2.8
1,531,881	-				+0.5
1,531,881	-				+0.8
1,531,881	-				-0.5
1,531,881	-				+1.8
1,532,092	+	rutF	MCAODC_24025	0.43	+1.2
1,532,093	-	rutF	MCAODC_24025	0.43	-0.5
1,532,096	+	rutF	MCAODC_24025	0.43	+1.0
1,532,096	+	rutF	MCAODC_24025	0.43	-0.5
1,532,346	+				+0.0
1,532,427	+				+1.3
1,532,497	-				-0.0
1,532,542	-	rutG	MCAODC_24030	0.11	+0.9
1,532,583	+	rutG	MCAODC_24030	0.14	-0.1
1,532,584	-	rutG	MCAODC_24030	0.14	-0.1
1,532,584	-	rutG	MCAODC_24030	0.14	+0.2
1,532,605	-	rutG	MCAODC_24030	0.16	+0.3
1,532,643	-	rutG	MCAODC_24030	0.19	+0.2
1,532,643	-	rutG	MCAODC_24030	0.19	+1.3
1,532,762	+	rutG	MCAODC_24030	0.28	-0.2
1,532,763	-	rutG	MCAODC_24030	0.28	-1.6
1,532,764	+	rutG	MCAODC_24030	0.28	+0.9