Strain Fitness in Escherichia coli ECRC101 around MCAODC_21200

Experiment: WM_RB68

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMCAODC_21185 and zorO are separated by 109 nucleotideszorO and zorP are separated by 519 nucleotideszorP and yehL are separated by 432 nucleotides MCAODC_21185: MCAODC_21185 - Protein, at 1,042,580 to 1,042,897 _21185 MCAODC_21190: zorO - Small toxic protein ZorO, at 1,043,007 to 1,043,096 zorO MCAODC_21200: zorP - Small toxic protein ZorP, at 1,043,616 to 1,043,705 zorP MCAODC_21210: yehL - Uncharacterized protein YehL, at 1,044,138 to 1,045,226 yehL Position (kb) 1043 1044Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1042.666 kb on + strand, within MCAODC_21185at 1042.681 kb on - strand, within MCAODC_21185at 1042.786 kb on + strand, within MCAODC_21185at 1042.788 kb on + strand, within MCAODC_21185at 1042.949 kb on + strandat 1042.986 kb on - strandat 1043.074 kb on - strand, within zorOat 1043.324 kb on - strandat 1043.536 kb on - strandat 1043.652 kb on + strand, within zorPat 1043.664 kb on + strand, within zorPat 1043.665 kb on - strand, within zorPat 1043.771 kb on + strandat 1043.771 kb on + strandat 1043.775 kb on + strandat 1043.775 kb on + strandat 1043.853 kb on - strandat 1043.853 kb on - strandat 1043.890 kb on - strandat 1043.907 kb on - strandat 1043.935 kb on - strandat 1044.135 kb on + strandat 1044.136 kb on - strandat 1044.185 kb on - strandat 1044.250 kb on + strand, within yehLat 1044.275 kb on + strand, within yehLat 1044.309 kb on - strand, within yehLat 1044.321 kb on - strand, within yehLat 1044.341 kb on + strand, within yehLat 1044.421 kb on + strand, within yehLat 1044.434 kb on + strand, within yehLat 1044.476 kb on + strand, within yehLat 1044.480 kb on - strand, within yehLat 1044.510 kb on + strand, within yehLat 1044.511 kb on - strand, within yehLat 1044.511 kb on - strand, within yehLat 1044.646 kb on + strand, within yehLat 1044.647 kb on - strand, within yehLat 1044.651 kb on - strand, within yehL

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_RB68
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1,042,666 + MCAODC_21185 0.27 +1.9
1,042,681 - MCAODC_21185 0.32 +0.1
1,042,786 + MCAODC_21185 0.65 +0.4
1,042,788 + MCAODC_21185 0.65 +0.5
1,042,949 + +1.0
1,042,986 - -0.1
1,043,074 - zorO MCAODC_21190 0.74 -0.2
1,043,324 - +0.5
1,043,536 - -0.5
1,043,652 + zorP MCAODC_21200 0.40 +1.7
1,043,664 + zorP MCAODC_21200 0.53 -0.5
1,043,665 - zorP MCAODC_21200 0.54 -1.6
1,043,771 + -1.5
1,043,771 + +0.8
1,043,775 + -0.5
1,043,775 + -3.0
1,043,853 - +0.8
1,043,853 - -0.4
1,043,890 - +0.1
1,043,907 - -0.9
1,043,935 - -1.6
1,044,135 + +0.1
1,044,136 - +1.0
1,044,185 - +1.8
1,044,250 + yehL MCAODC_21210 0.10 +0.2
1,044,275 + yehL MCAODC_21210 0.13 -0.4
1,044,309 - yehL MCAODC_21210 0.16 -1.0
1,044,321 - yehL MCAODC_21210 0.17 +0.7
1,044,341 + yehL MCAODC_21210 0.19 -0.8
1,044,421 + yehL MCAODC_21210 0.26 -0.6
1,044,434 + yehL MCAODC_21210 0.27 -0.1
1,044,476 + yehL MCAODC_21210 0.31 +0.9
1,044,480 - yehL MCAODC_21210 0.31 -1.0
1,044,510 + yehL MCAODC_21210 0.34 +1.2
1,044,511 - yehL MCAODC_21210 0.34 +0.1
1,044,511 - yehL MCAODC_21210 0.34 +0.3
1,044,646 + yehL MCAODC_21210 0.47 +0.4
1,044,647 - yehL MCAODC_21210 0.47 -1.6
1,044,651 - yehL MCAODC_21210 0.47 +0.6

Or see this region's nucleotide sequence