Strain Fitness in Escherichia coli ECRC101 around MCAODC_10460

Experiment: WM_RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_RB68
2,080,813	+	araE	MCAODC_10455	0.42	+0.4
2,080,814	-	araE	MCAODC_10455	0.42	+0.0
2,080,846	+	araE	MCAODC_10455	0.45	-1.3
2,080,847	-	araE	MCAODC_10455	0.45	+0.1
2,080,870	+	araE	MCAODC_10455	0.46	-0.7
2,080,871	-	araE	MCAODC_10455	0.46	+0.2
2,080,871	-	araE	MCAODC_10455	0.46	+0.3
2,080,871	-	araE	MCAODC_10455	0.46	-0.2
2,080,882	+	araE	MCAODC_10455	0.47	+0.4
2,080,882	+	araE	MCAODC_10455	0.47	-3.4
2,080,883	-	araE	MCAODC_10455	0.47	-0.4
2,080,960	+	araE	MCAODC_10455	0.53	-0.5
2,081,000	-	araE	MCAODC_10455	0.55	+0.8
2,081,048	+	araE	MCAODC_10455	0.59	-0.8
2,081,048	+	araE	MCAODC_10455	0.59	+0.2
2,081,048	+	araE	MCAODC_10455	0.59	+0.3
2,081,048	+	araE	MCAODC_10455	0.59	+0.4
2,081,048	+	araE	MCAODC_10455	0.59	-1.3
2,081,049	-	araE	MCAODC_10455	0.59	-0.6
2,081,049	-	araE	MCAODC_10455	0.59	+0.7
2,081,049	-	araE	MCAODC_10455	0.59	-0.4
2,081,049	-	araE	MCAODC_10455	0.59	+0.7
2,081,051	+	araE	MCAODC_10455	0.59	+2.8
2,081,051	+	araE	MCAODC_10455	0.59	-0.6
2,081,052	-	araE	MCAODC_10455	0.59	+1.1
2,081,052	-	araE	MCAODC_10455	0.59	-0.2
2,081,062	+	araE	MCAODC_10455	0.60	-0.9
2,081,134	+	araE	MCAODC_10455	0.65	+0.4
2,081,135	-	araE	MCAODC_10455	0.65	-0.4
2,081,162	-	araE	MCAODC_10455	0.67	+0.6
2,081,170	+	araE	MCAODC_10455	0.67	+0.2
2,081,170	+	araE	MCAODC_10455	0.67	+0.3
2,081,170	+	araE	MCAODC_10455	0.67	+0.8
2,081,170	+	araE	MCAODC_10455	0.67	-0.6
2,081,171	-	araE	MCAODC_10455	0.67	-0.7
2,081,171	-	araE	MCAODC_10455	0.67	+3.5
2,081,241	-	araE	MCAODC_10455	0.72	-0.4
2,081,317	+	araE	MCAODC_10455	0.78	+0.5
2,081,317	+	araE	MCAODC_10455	0.78	+0.2
2,081,318	-	araE	MCAODC_10455	0.78	+0.2
2,081,318	-	araE	MCAODC_10455	0.78	+1.0
2,081,328	-	araE	MCAODC_10455	0.79	-0.4
2,081,402	-	araE	MCAODC_10455	0.84	-1.7
2,081,404	+	araE	MCAODC_10455	0.84	-0.8
2,081,404	+	araE	MCAODC_10455	0.84	+0.2
2,081,404	+	araE	MCAODC_10455	0.84	+0.5
2,081,405	-	araE	MCAODC_10455	0.84	-0.4
2,081,437	+	araE	MCAODC_10455	0.86	+0.3
2,081,438	-	araE	MCAODC_10455	0.86	+0.4
2,081,474	-	araE	MCAODC_10455	0.89	-0.1
2,081,504	+				+1.2
2,081,581	+				+0.3
2,081,654	+				-1.1
2,081,655	-				-0.4
2,081,655	-				+0.8
2,081,655	-				+0.5
2,081,679	-				-1.2
2,081,722	-				+0.1
2,081,812	+				+1.7
2,081,879	+	ygeA	MCAODC_10460	0.17	-1.1
2,081,884	-	ygeA	MCAODC_10460	0.18	+0.5
2,081,884	-	ygeA	MCAODC_10460	0.18	+0.4
2,081,884	-	ygeA	MCAODC_10460	0.18	-0.8
2,081,884	-	ygeA	MCAODC_10460	0.18	-0.0
2,081,903	+	ygeA	MCAODC_10460	0.20	+1.0
2,081,904	-	ygeA	MCAODC_10460	0.21	+0.8
2,081,904	-	ygeA	MCAODC_10460	0.21	+1.1
2,081,994	+	ygeA	MCAODC_10460	0.34	+0.6
2,081,995	-	ygeA	MCAODC_10460	0.34	+0.2
2,081,995	-	ygeA	MCAODC_10460	0.34	-0.3
2,082,002	+	ygeA	MCAODC_10460	0.35	-0.9
2,082,003	-	ygeA	MCAODC_10460	0.35	+0.4
2,082,003	-	ygeA	MCAODC_10460	0.35	-0.9
2,082,003	-	ygeA	MCAODC_10460	0.35	+0.5
2,082,003	-	ygeA	MCAODC_10460	0.35	-0.2
2,082,006	+	ygeA	MCAODC_10460	0.35	+0.5
2,082,006	+	ygeA	MCAODC_10460	0.35	+1.6
2,082,012	+	ygeA	MCAODC_10460	0.36	+1.2
2,082,021	+	ygeA	MCAODC_10460	0.38	-2.0
2,082,065	+	ygeA	MCAODC_10460	0.44	+0.6
2,082,065	+	ygeA	MCAODC_10460	0.44	-0.2
2,082,065	+	ygeA	MCAODC_10460	0.44	+1.0
2,082,132	+	ygeA	MCAODC_10460	0.54	-2.9
2,082,139	+	ygeA	MCAODC_10460	0.55	-0.3
2,082,139	+	ygeA	MCAODC_10460	0.55	-0.5
2,082,140	-	ygeA	MCAODC_10460	0.55	+0.4
2,082,201	+	ygeA	MCAODC_10460	0.63	+0.5
2,082,289	+	ygeA	MCAODC_10460	0.76	-1.6
2,082,290	-	ygeA	MCAODC_10460	0.76	+1.4
2,082,290	-	ygeA	MCAODC_10460	0.76	+0.7
2,082,292	+	ygeA	MCAODC_10460	0.77	+1.7
2,082,293	-	ygeA	MCAODC_10460	0.77	-0.1
2,082,365	+	ygeA	MCAODC_10460	0.87	-0.2
2,082,366	-	ygeA	MCAODC_10460	0.87	+0.9
2,082,441	+				+3.5
2,082,442	-				-1.1
2,082,442	-				-0.0
2,082,442	-				-0.7
2,082,466	+				+0.2
2,082,662	+	lysR	MCAODC_10465	0.24	+0.5
2,082,662	+	lysR	MCAODC_10465	0.24	+0.4
2,082,675	-	lysR	MCAODC_10465	0.25	-1.7
2,082,675	-	lysR	MCAODC_10465	0.25	+0.3
2,082,742	+	lysR	MCAODC_10465	0.32	-0.9
2,082,746	+	lysR	MCAODC_10465	0.33	+0.4
2,082,746	+	lysR	MCAODC_10465	0.33	+0.4
2,082,747	-	lysR	MCAODC_10465	0.33	+0.7
2,082,747	-	lysR	MCAODC_10465	0.33	+0.4
2,082,769	-	lysR	MCAODC_10465	0.35	-0.6
2,082,769	-	lysR	MCAODC_10465	0.35	-1.6
2,082,795	+	lysR	MCAODC_10465	0.38	-1.5
2,082,796	-	lysR	MCAODC_10465	0.38	+0.2
2,082,828	-	lysR	MCAODC_10465	0.41	-0.3
2,082,828	-	lysR	MCAODC_10465	0.41	+0.5
2,082,861	-	lysR	MCAODC_10465	0.45	+0.0
2,082,878	+	lysR	MCAODC_10465	0.47	-3.2
2,082,878	+	lysR	MCAODC_10465	0.47	+0.3
2,082,879	-	lysR	MCAODC_10465	0.47	+0.6
2,082,879	-	lysR	MCAODC_10465	0.47	-0.2
2,082,916	+	lysR	MCAODC_10465	0.51	-0.7
2,082,938	+	lysR	MCAODC_10465	0.53	+0.6
2,082,997	+	lysR	MCAODC_10465	0.60	+1.0
2,082,997	+	lysR	MCAODC_10465	0.60	-1.2
2,082,997	+	lysR	MCAODC_10465	0.60	-0.3
2,082,998	-	lysR	MCAODC_10465	0.60	+0.2
2,083,002	-	lysR	MCAODC_10465	0.60	-0.4
2,083,002	-	lysR	MCAODC_10465	0.60	+0.6
2,083,002	-	lysR	MCAODC_10465	0.60	+2.6
2,083,049	+	lysR	MCAODC_10465	0.65	-0.4
2,083,085	-	lysR	MCAODC_10465	0.69	+0.8
2,083,085	-	lysR	MCAODC_10465	0.69	-0.2
2,083,085	-	lysR	MCAODC_10465	0.69	+0.1
2,083,085	-	lysR	MCAODC_10465	0.69	+1.2
2,083,196	-	lysR	MCAODC_10465	0.81	-0.3
2,083,196	-	lysR	MCAODC_10465	0.81	+0.4
2,083,202	+	lysR	MCAODC_10465	0.81	-0.2
2,083,203	-	lysR	MCAODC_10465	0.82	-0.3
2,083,203	-	lysR	MCAODC_10465	0.82	+0.7
2,083,293	-				+0.3
2,083,358	+				+0.1
2,083,358	+				-0.8
2,083,358	+				-0.9
2,083,358	+				+0.1
2,083,359	-				+1.1
2,083,363	+				+1.0
2,083,363	+				+0.5
2,083,452	+				-1.8