Experiment: WM_RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mlaC and mlaC overlap by 1 nucleotides mlaC and ibaG are separated by 144 nucleotides ibaG and murA are separated by 54 nucleotides
MCAODC_08510: mlaC - phospholipid-binding protein MlaC, at 1,705,951 to 1,706,586
mlaC
MCAODC_08515: mlaC - phospholipid-binding protein MlaC, at 1,706,586 to 1,706,879
mlaC
MCAODC_08520: ibaG - BolA family iron metabolism protein IbaG, at 1,707,024 to 1,707,293
ibaG
MCAODC_08525: murA - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,707,348 to 1,708,607
murA
Position (kb)
1707
1708 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1706.032 kb on + strand, within mlaC at 1706.033 kb on - strand, within mlaC at 1706.034 kb on + strand, within mlaC at 1706.034 kb on + strand, within mlaC at 1706.035 kb on - strand, within mlaC at 1706.035 kb on - strand, within mlaC at 1706.121 kb on + strand, within mlaC at 1706.122 kb on - strand, within mlaC at 1706.149 kb on + strand, within mlaC at 1706.150 kb on - strand, within mlaC at 1706.153 kb on + strand, within mlaC at 1706.153 kb on + strand, within mlaC at 1706.153 kb on + strand, within mlaC at 1706.154 kb on - strand, within mlaC at 1706.154 kb on - strand, within mlaC at 1706.154 kb on - strand, within mlaC at 1706.154 kb on - strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.194 kb on + strand, within mlaC at 1706.195 kb on - strand, within mlaC at 1706.195 kb on - strand, within mlaC at 1706.195 kb on - strand, within mlaC at 1706.227 kb on + strand, within mlaC at 1706.227 kb on + strand, within mlaC at 1706.227 kb on + strand, within mlaC at 1706.227 kb on + strand, within mlaC at 1706.228 kb on - strand, within mlaC at 1706.228 kb on - strand, within mlaC at 1706.228 kb on - strand, within mlaC at 1706.248 kb on + strand, within mlaC at 1706.248 kb on + strand, within mlaC at 1706.264 kb on - strand, within mlaC at 1706.264 kb on - strand, within mlaC at 1706.285 kb on - strand, within mlaC at 1706.300 kb on - strand, within mlaC at 1706.331 kb on + strand, within mlaC at 1706.332 kb on - strand, within mlaC at 1706.440 kb on + strand, within mlaC at 1706.466 kb on + strand, within mlaC at 1706.467 kb on - strand, within mlaC at 1706.504 kb on + strand, within mlaC at 1706.504 kb on + strand, within mlaC at 1706.508 kb on + strand, within mlaC at 1706.508 kb on + strand, within mlaC at 1706.508 kb on + strand, within mlaC at 1706.509 kb on - strand, within mlaC at 1706.518 kb on - strand, within mlaC at 1706.702 kb on + strand, within mlaC at 1706.702 kb on + strand, within mlaC at 1706.703 kb on - strand, within mlaC at 1706.703 kb on - strand, within mlaC at 1706.703 kb on - strand, within mlaC at 1706.717 kb on + strand, within mlaC at 1706.718 kb on - strand, within mlaC at 1706.738 kb on + strand, within mlaC at 1706.738 kb on + strand, within mlaC at 1706.816 kb on - strand, within mlaC at 1706.829 kb on + strand, within mlaC at 1706.829 kb on + strand, within mlaC at 1706.829 kb on + strand, within mlaC at 1706.829 kb on + strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.830 kb on - strand, within mlaC at 1706.831 kb on + strand, within mlaC at 1706.847 kb on + strand, within mlaC at 1706.847 kb on + strand, within mlaC at 1706.849 kb on + strand, within mlaC at 1706.952 kb on + strand at 1706.972 kb on + strand at 1706.973 kb on - strand at 1706.976 kb on + strand at 1706.997 kb on + strand at 1707.018 kb on + strand at 1707.018 kb on + strand at 1707.018 kb on + strand at 1707.047 kb on + strand at 1707.204 kb on + strand, within ibaG at 1707.204 kb on + strand, within ibaG at 1707.204 kb on + strand, within ibaG at 1707.204 kb on + strand, within ibaG at 1707.204 kb on + strand, within ibaG at 1707.206 kb on + strand, within ibaG at 1707.246 kb on + strand, within ibaG at 1707.246 kb on + strand, within ibaG at 1707.246 kb on + strand, within ibaG at 1707.246 kb on + strand, within ibaG at 1707.246 kb on + strand, within ibaG at 1707.296 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_RB68 remove 1,706,032 + mlaC MCAODC_08510 0.13 -0.5 1,706,033 - mlaC MCAODC_08510 0.13 -0.6 1,706,034 + mlaC MCAODC_08510 0.13 +0.1 1,706,034 + mlaC MCAODC_08510 0.13 +0.3 1,706,035 - mlaC MCAODC_08510 0.13 +1.7 1,706,035 - mlaC MCAODC_08510 0.13 -0.1 1,706,121 + mlaC MCAODC_08510 0.27 +0.5 1,706,122 - mlaC MCAODC_08510 0.27 -1.0 1,706,149 + mlaC MCAODC_08510 0.31 +0.5 1,706,150 - mlaC MCAODC_08510 0.31 -1.0 1,706,153 + mlaC MCAODC_08510 0.32 -1.0 1,706,153 + mlaC MCAODC_08510 0.32 +0.7 1,706,153 + mlaC MCAODC_08510 0.32 +0.5 1,706,154 - mlaC MCAODC_08510 0.32 -0.5 1,706,154 - mlaC MCAODC_08510 0.32 +0.3 1,706,154 - mlaC MCAODC_08510 0.32 -1.6 1,706,154 - mlaC MCAODC_08510 0.32 +0.5 1,706,194 + mlaC MCAODC_08510 0.38 -0.5 1,706,194 + mlaC MCAODC_08510 0.38 +0.3 1,706,194 + mlaC MCAODC_08510 0.38 -0.5 1,706,194 + mlaC MCAODC_08510 0.38 +0.4 1,706,194 + mlaC MCAODC_08510 0.38 -0.8 1,706,194 + mlaC MCAODC_08510 0.38 -0.7 1,706,194 + mlaC MCAODC_08510 0.38 -0.2 1,706,195 - mlaC MCAODC_08510 0.38 +0.6 1,706,195 - mlaC MCAODC_08510 0.38 +0.4 1,706,195 - mlaC MCAODC_08510 0.38 -0.5 1,706,227 + mlaC MCAODC_08510 0.43 -0.4 1,706,227 + mlaC MCAODC_08510 0.43 +0.6 1,706,227 + mlaC MCAODC_08510 0.43 -0.7 1,706,227 + mlaC MCAODC_08510 0.43 -1.0 1,706,228 - mlaC MCAODC_08510 0.44 -0.1 1,706,228 - mlaC MCAODC_08510 0.44 -1.6 1,706,228 - mlaC MCAODC_08510 0.44 +0.1 1,706,248 + mlaC MCAODC_08510 0.47 -0.4 1,706,248 + mlaC MCAODC_08510 0.47 +0.2 1,706,264 - mlaC MCAODC_08510 0.49 -0.2 1,706,264 - mlaC MCAODC_08510 0.49 -1.0 1,706,285 - mlaC MCAODC_08510 0.53 +0.2 1,706,300 - mlaC MCAODC_08510 0.55 -0.4 1,706,331 + mlaC MCAODC_08510 0.60 +0.2 1,706,332 - mlaC MCAODC_08510 0.60 +0.3 1,706,440 + mlaC MCAODC_08510 0.77 +0.4 1,706,466 + mlaC MCAODC_08510 0.81 +0.3 1,706,467 - mlaC MCAODC_08510 0.81 +0.5 1,706,504 + mlaC MCAODC_08510 0.87 -0.1 1,706,504 + mlaC MCAODC_08510 0.87 -1.0 1,706,508 + mlaC MCAODC_08510 0.88 +0.1 1,706,508 + mlaC MCAODC_08510 0.88 -1.3 1,706,508 + mlaC MCAODC_08510 0.88 +0.3 1,706,509 - mlaC MCAODC_08510 0.88 +0.5 1,706,518 - mlaC MCAODC_08510 0.89 +0.2 1,706,702 + mlaC MCAODC_08515 0.39 -0.5 1,706,702 + mlaC MCAODC_08515 0.39 -0.7 1,706,703 - mlaC MCAODC_08515 0.40 -0.0 1,706,703 - mlaC MCAODC_08515 0.40 -0.6 1,706,703 - mlaC MCAODC_08515 0.40 +1.6 1,706,717 + mlaC MCAODC_08515 0.45 -0.6 1,706,718 - mlaC MCAODC_08515 0.45 -0.1 1,706,738 + mlaC MCAODC_08515 0.52 +0.2 1,706,738 + mlaC MCAODC_08515 0.52 -0.0 1,706,816 - mlaC MCAODC_08515 0.78 -0.7 1,706,829 + mlaC MCAODC_08515 0.83 -1.8 1,706,829 + mlaC MCAODC_08515 0.83 -0.0 1,706,829 + mlaC MCAODC_08515 0.83 +0.3 1,706,829 + mlaC MCAODC_08515 0.83 +0.3 1,706,830 - mlaC MCAODC_08515 0.83 +0.4 1,706,830 - mlaC MCAODC_08515 0.83 +0.8 1,706,830 - mlaC MCAODC_08515 0.83 +0.3 1,706,830 - mlaC MCAODC_08515 0.83 +0.1 1,706,830 - mlaC MCAODC_08515 0.83 +1.2 1,706,830 - mlaC MCAODC_08515 0.83 +1.7 1,706,831 + mlaC MCAODC_08515 0.83 -1.5 1,706,847 + mlaC MCAODC_08515 0.89 +1.0 1,706,847 + mlaC MCAODC_08515 0.89 +1.3 1,706,849 + mlaC MCAODC_08515 0.89 -0.5 1,706,952 + -1.0 1,706,972 + -0.3 1,706,973 - -0.5 1,706,976 + -0.9 1,706,997 + -0.3 1,707,018 + +0.4 1,707,018 + +0.8 1,707,018 + +0.4 1,707,047 + -2.1 1,707,204 + ibaG MCAODC_08520 0.67 +0.2 1,707,204 + ibaG MCAODC_08520 0.67 -0.4 1,707,204 + ibaG MCAODC_08520 0.67 -0.8 1,707,204 + ibaG MCAODC_08520 0.67 +1.0 1,707,204 + ibaG MCAODC_08520 0.67 +0.1 1,707,206 + ibaG MCAODC_08520 0.67 -2.9 1,707,246 + ibaG MCAODC_08520 0.82 +0.8 1,707,246 + ibaG MCAODC_08520 0.82 -0.4 1,707,246 + ibaG MCAODC_08520 0.82 -0.2 1,707,246 + ibaG MCAODC_08520 0.82 -1.5 1,707,246 + ibaG MCAODC_08520 0.82 +0.9 1,707,296 + -1.0
Or see this region's nucleotide sequence