Experiment: WM_RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pstS and MCAODC_07450 overlap by 1 nucleotides MCAODC_07450 and glpD are separated by 214 nucleotides
MCAODC_07445: pstS - ABC transporter ATP-binding protein, at 1,507,920 to 1,508,912
pstS
MCAODC_07450: MCAODC_07450 - Ybl142, at 1,508,912 to 1,509,514
_07450
MCAODC_07455: glpD - glycerol-3-phosphate dehydrogenase, at 1,509,729 to 1,511,234
glpD
Position (kb)
1508
1509
1510 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1507.942 kb on + strand at 1507.943 kb on - strand at 1507.945 kb on + strand at 1507.945 kb on + strand at 1507.946 kb on - strand at 1507.946 kb on - strand at 1507.949 kb on - strand at 1507.990 kb on - strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.992 kb on + strand at 1507.993 kb on - strand at 1507.993 kb on - strand at 1507.993 kb on - strand at 1507.994 kb on + strand at 1507.995 kb on - strand at 1508.053 kb on + strand, within pstS at 1508.091 kb on + strand, within pstS at 1508.107 kb on + strand, within pstS at 1508.108 kb on - strand, within pstS at 1508.108 kb on - strand, within pstS at 1508.108 kb on - strand, within pstS at 1508.108 kb on - strand, within pstS at 1508.109 kb on + strand, within pstS at 1508.110 kb on - strand, within pstS at 1508.118 kb on + strand, within pstS at 1508.119 kb on - strand, within pstS at 1508.119 kb on - strand, within pstS at 1508.130 kb on + strand, within pstS at 1508.131 kb on - strand, within pstS at 1508.135 kb on + strand, within pstS at 1508.136 kb on - strand, within pstS at 1508.136 kb on - strand, within pstS at 1508.140 kb on + strand, within pstS at 1508.191 kb on - strand, within pstS at 1508.223 kb on + strand, within pstS at 1508.224 kb on - strand, within pstS at 1508.228 kb on + strand, within pstS at 1508.237 kb on + strand, within pstS at 1508.237 kb on + strand, within pstS at 1508.238 kb on - strand, within pstS at 1508.312 kb on + strand, within pstS at 1508.323 kb on - strand, within pstS at 1508.323 kb on - strand, within pstS at 1508.366 kb on + strand, within pstS at 1508.367 kb on - strand, within pstS at 1508.438 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.443 kb on + strand, within pstS at 1508.444 kb on - strand, within pstS at 1508.444 kb on - strand, within pstS at 1508.462 kb on + strand, within pstS at 1508.463 kb on - strand, within pstS at 1508.464 kb on + strand, within pstS at 1508.464 kb on + strand, within pstS at 1508.464 kb on + strand, within pstS at 1508.465 kb on - strand, within pstS at 1508.465 kb on - strand, within pstS at 1508.507 kb on + strand, within pstS at 1508.508 kb on - strand, within pstS at 1508.584 kb on + strand, within pstS at 1508.646 kb on + strand, within pstS at 1508.646 kb on + strand, within pstS at 1508.647 kb on - strand, within pstS at 1508.647 kb on - strand, within pstS at 1508.647 kb on - strand, within pstS at 1508.647 kb on - strand, within pstS at 1508.669 kb on + strand, within pstS at 1508.669 kb on + strand, within pstS at 1508.670 kb on - strand, within pstS at 1508.708 kb on - strand, within pstS at 1508.708 kb on - strand, within pstS at 1508.751 kb on + strand, within pstS at 1508.757 kb on + strand, within pstS at 1508.757 kb on + strand, within pstS at 1508.757 kb on + strand, within pstS at 1508.757 kb on + strand, within pstS at 1508.758 kb on - strand, within pstS at 1508.772 kb on + strand, within pstS at 1508.772 kb on + strand, within pstS at 1508.772 kb on + strand, within pstS at 1508.774 kb on + strand, within pstS at 1508.775 kb on - strand, within pstS at 1508.829 kb on - strand at 1508.830 kb on + strand at 1508.854 kb on + strand at 1508.868 kb on + strand at 1508.868 kb on + strand at 1508.869 kb on - strand at 1508.880 kb on + strand at 1508.881 kb on - strand at 1508.910 kb on + strand at 1508.911 kb on - strand at 1508.911 kb on - strand at 1508.920 kb on + strand at 1508.920 kb on + strand at 1508.922 kb on + strand at 1508.922 kb on + strand at 1508.933 kb on + strand at 1508.935 kb on + strand at 1508.940 kb on - strand at 1508.946 kb on + strand at 1508.963 kb on - strand at 1508.963 kb on - strand at 1508.967 kb on + strand at 1508.968 kb on - strand at 1509.039 kb on + strand, within MCAODC_07450 at 1509.040 kb on - strand, within MCAODC_07450 at 1509.040 kb on - strand, within MCAODC_07450 at 1509.040 kb on - strand, within MCAODC_07450 at 1509.040 kb on - strand, within MCAODC_07450 at 1509.070 kb on + strand, within MCAODC_07450 at 1509.070 kb on + strand, within MCAODC_07450 at 1509.070 kb on + strand, within MCAODC_07450 at 1509.070 kb on + strand, within MCAODC_07450 at 1509.070 kb on + strand, within MCAODC_07450 at 1509.088 kb on - strand, within MCAODC_07450 at 1509.093 kb on + strand, within MCAODC_07450 at 1509.093 kb on + strand, within MCAODC_07450 at 1509.094 kb on - strand, within MCAODC_07450 at 1509.094 kb on - strand, within MCAODC_07450 at 1509.094 kb on - strand, within MCAODC_07450 at 1509.094 kb on - strand, within MCAODC_07450 at 1509.094 kb on - strand, within MCAODC_07450 at 1509.204 kb on + strand, within MCAODC_07450 at 1509.204 kb on + strand, within MCAODC_07450 at 1509.286 kb on + strand, within MCAODC_07450 at 1509.376 kb on - strand, within MCAODC_07450 at 1509.405 kb on - strand, within MCAODC_07450 at 1509.407 kb on + strand, within MCAODC_07450 at 1509.407 kb on + strand, within MCAODC_07450 at 1509.407 kb on + strand, within MCAODC_07450 at 1509.408 kb on - strand, within MCAODC_07450 at 1509.430 kb on + strand, within MCAODC_07450 at 1509.471 kb on + strand at 1509.472 kb on - strand at 1509.481 kb on + strand at 1509.481 kb on + strand at 1509.482 kb on - strand at 1509.490 kb on + strand at 1509.533 kb on - strand at 1509.622 kb on + strand at 1509.623 kb on - strand at 1509.720 kb on + strand at 1509.721 kb on - strand at 1509.721 kb on - strand at 1509.721 kb on - strand at 1509.725 kb on + strand at 1509.758 kb on + strand at 1509.758 kb on + strand at 1509.758 kb on + strand at 1509.758 kb on + strand at 1509.758 kb on + strand at 1509.758 kb on + strand at 1509.759 kb on - strand at 1509.759 kb on - strand at 1509.877 kb on + strand at 1509.878 kb on - strand at 1509.878 kb on - strand at 1509.973 kb on + strand, within glpD at 1509.973 kb on + strand, within glpD at 1509.977 kb on + strand, within glpD at 1510.120 kb on + strand, within glpD at 1510.235 kb on - strand, within glpD at 1510.235 kb on - strand, within glpD at 1510.310 kb on + strand, within glpD at 1510.335 kb on - strand, within glpD at 1510.348 kb on + strand, within glpD at 1510.364 kb on - strand, within glpD at 1510.472 kb on + strand, within glpD at 1510.498 kb on + strand, within glpD at 1510.499 kb on - strand, within glpD at 1510.499 kb on - strand, within glpD at 1510.499 kb on - strand, within glpD
Per-strain Table
Position Strand Gene LocusTag Fraction WM_RB68 remove 1,507,942 + -0.1 1,507,943 - +0.4 1,507,945 + -0.5 1,507,945 + -0.3 1,507,946 - +0.2 1,507,946 - +1.3 1,507,949 - +0.8 1,507,990 - +0.1 1,507,992 + +0.3 1,507,992 + -0.9 1,507,992 + -0.7 1,507,992 + +2.2 1,507,992 + -0.1 1,507,992 + -0.8 1,507,992 + +0.0 1,507,992 + -2.0 1,507,993 - +1.0 1,507,993 - +1.2 1,507,993 - -2.3 1,507,994 + +0.9 1,507,995 - -1.0 1,508,053 + pstS MCAODC_07445 0.13 -0.1 1,508,091 + pstS MCAODC_07445 0.17 +0.6 1,508,107 + pstS MCAODC_07445 0.19 -0.1 1,508,108 - pstS MCAODC_07445 0.19 -0.3 1,508,108 - pstS MCAODC_07445 0.19 +0.0 1,508,108 - pstS MCAODC_07445 0.19 +0.8 1,508,108 - pstS MCAODC_07445 0.19 -0.9 1,508,109 + pstS MCAODC_07445 0.19 +0.7 1,508,110 - pstS MCAODC_07445 0.19 -0.4 1,508,118 + pstS MCAODC_07445 0.20 +1.0 1,508,119 - pstS MCAODC_07445 0.20 +0.6 1,508,119 - pstS MCAODC_07445 0.20 +0.2 1,508,130 + pstS MCAODC_07445 0.21 -1.5 1,508,131 - pstS MCAODC_07445 0.21 -0.5 1,508,135 + pstS MCAODC_07445 0.22 -0.8 1,508,136 - pstS MCAODC_07445 0.22 +0.3 1,508,136 - pstS MCAODC_07445 0.22 -0.2 1,508,140 + pstS MCAODC_07445 0.22 -0.7 1,508,191 - pstS MCAODC_07445 0.27 -0.1 1,508,223 + pstS MCAODC_07445 0.31 -0.0 1,508,224 - pstS MCAODC_07445 0.31 -0.1 1,508,228 + pstS MCAODC_07445 0.31 -1.1 1,508,237 + pstS MCAODC_07445 0.32 -0.5 1,508,237 + pstS MCAODC_07445 0.32 +0.1 1,508,238 - pstS MCAODC_07445 0.32 -1.7 1,508,312 + pstS MCAODC_07445 0.39 +0.0 1,508,323 - pstS MCAODC_07445 0.41 +0.6 1,508,323 - pstS MCAODC_07445 0.41 +0.1 1,508,366 + pstS MCAODC_07445 0.45 +0.9 1,508,367 - pstS MCAODC_07445 0.45 +0.4 1,508,438 + pstS MCAODC_07445 0.52 -1.6 1,508,443 + pstS MCAODC_07445 0.53 +1.4 1,508,443 + pstS MCAODC_07445 0.53 -0.3 1,508,443 + pstS MCAODC_07445 0.53 -0.6 1,508,443 + pstS MCAODC_07445 0.53 +1.3 1,508,443 + pstS MCAODC_07445 0.53 -1.0 1,508,443 + pstS MCAODC_07445 0.53 +0.1 1,508,444 - pstS MCAODC_07445 0.53 -0.7 1,508,444 - pstS MCAODC_07445 0.53 -0.3 1,508,462 + pstS MCAODC_07445 0.55 -0.8 1,508,463 - pstS MCAODC_07445 0.55 +0.7 1,508,464 + pstS MCAODC_07445 0.55 +0.9 1,508,464 + pstS MCAODC_07445 0.55 -1.3 1,508,464 + pstS MCAODC_07445 0.55 -0.2 1,508,465 - pstS MCAODC_07445 0.55 -0.2 1,508,465 - pstS MCAODC_07445 0.55 +0.0 1,508,507 + pstS MCAODC_07445 0.59 +0.3 1,508,508 - pstS MCAODC_07445 0.59 +0.0 1,508,584 + pstS MCAODC_07445 0.67 -0.7 1,508,646 + pstS MCAODC_07445 0.73 -2.8 1,508,646 + pstS MCAODC_07445 0.73 +0.3 1,508,647 - pstS MCAODC_07445 0.73 -1.4 1,508,647 - pstS MCAODC_07445 0.73 -1.2 1,508,647 - pstS MCAODC_07445 0.73 +0.5 1,508,647 - pstS MCAODC_07445 0.73 -1.3 1,508,669 + pstS MCAODC_07445 0.75 +0.2 1,508,669 + pstS MCAODC_07445 0.75 -0.1 1,508,670 - pstS MCAODC_07445 0.76 +1.1 1,508,708 - pstS MCAODC_07445 0.79 +0.4 1,508,708 - pstS MCAODC_07445 0.79 +0.3 1,508,751 + pstS MCAODC_07445 0.84 +0.2 1,508,757 + pstS MCAODC_07445 0.84 -1.6 1,508,757 + pstS MCAODC_07445 0.84 -0.5 1,508,757 + pstS MCAODC_07445 0.84 +0.8 1,508,757 + pstS MCAODC_07445 0.84 +0.7 1,508,758 - pstS MCAODC_07445 0.84 +0.9 1,508,772 + pstS MCAODC_07445 0.86 -2.9 1,508,772 + pstS MCAODC_07445 0.86 -0.0 1,508,772 + pstS MCAODC_07445 0.86 +0.1 1,508,774 + pstS MCAODC_07445 0.86 +0.3 1,508,775 - pstS MCAODC_07445 0.86 +0.2 1,508,829 - +0.1 1,508,830 + +0.9 1,508,854 + +0.2 1,508,868 + +1.2 1,508,868 + +0.1 1,508,869 - +0.8 1,508,880 + +0.4 1,508,881 - -0.0 1,508,910 + +0.2 1,508,911 - +1.3 1,508,911 - +0.1 1,508,920 + +0.2 1,508,920 + +1.2 1,508,922 + -0.9 1,508,922 + +0.7 1,508,933 + +0.1 1,508,935 + +0.4 1,508,940 - -1.6 1,508,946 + +0.1 1,508,963 - +1.2 1,508,963 - -1.9 1,508,967 + -0.6 1,508,968 - +0.7 1,509,039 + MCAODC_07450 0.21 -1.0 1,509,040 - MCAODC_07450 0.21 +0.1 1,509,040 - MCAODC_07450 0.21 +0.2 1,509,040 - MCAODC_07450 0.21 -0.2 1,509,040 - MCAODC_07450 0.21 +0.1 1,509,070 + MCAODC_07450 0.26 -2.1 1,509,070 + MCAODC_07450 0.26 +0.2 1,509,070 + MCAODC_07450 0.26 +0.2 1,509,070 + MCAODC_07450 0.26 +0.2 1,509,070 + MCAODC_07450 0.26 -0.4 1,509,088 - MCAODC_07450 0.29 -1.4 1,509,093 + MCAODC_07450 0.30 +0.7 1,509,093 + MCAODC_07450 0.30 +0.3 1,509,094 - MCAODC_07450 0.30 -0.5 1,509,094 - MCAODC_07450 0.30 +0.2 1,509,094 - MCAODC_07450 0.30 +1.3 1,509,094 - MCAODC_07450 0.30 -1.0 1,509,094 - MCAODC_07450 0.30 -1.7 1,509,204 + MCAODC_07450 0.48 +0.1 1,509,204 + MCAODC_07450 0.48 -0.3 1,509,286 + MCAODC_07450 0.62 -0.1 1,509,376 - MCAODC_07450 0.77 +0.4 1,509,405 - MCAODC_07450 0.82 -0.9 1,509,407 + MCAODC_07450 0.82 +0.3 1,509,407 + MCAODC_07450 0.82 -0.1 1,509,407 + MCAODC_07450 0.82 -0.8 1,509,408 - MCAODC_07450 0.82 -0.2 1,509,430 + MCAODC_07450 0.86 +1.2 1,509,471 + +1.3 1,509,472 - +0.5 1,509,481 + +0.1 1,509,481 + +0.2 1,509,482 - +0.4 1,509,490 + -1.5 1,509,533 - -1.1 1,509,622 + -0.1 1,509,623 - -0.2 1,509,720 + -0.7 1,509,721 - -0.0 1,509,721 - -1.3 1,509,721 - -0.0 1,509,725 + -2.7 1,509,758 + -0.5 1,509,758 + +0.8 1,509,758 + -0.7 1,509,758 + -0.9 1,509,758 + +0.2 1,509,758 + +0.6 1,509,759 - +0.3 1,509,759 - +0.4 1,509,877 + -0.8 1,509,878 - +0.3 1,509,878 - -0.7 1,509,973 + glpD MCAODC_07455 0.16 -1.5 1,509,973 + glpD MCAODC_07455 0.16 -0.8 1,509,977 + glpD MCAODC_07455 0.16 -1.2 1,510,120 + glpD MCAODC_07455 0.26 -1.0 1,510,235 - glpD MCAODC_07455 0.34 -1.2 1,510,235 - glpD MCAODC_07455 0.34 +0.2 1,510,310 + glpD MCAODC_07455 0.39 +0.2 1,510,335 - glpD MCAODC_07455 0.40 -0.2 1,510,348 + glpD MCAODC_07455 0.41 +1.2 1,510,364 - glpD MCAODC_07455 0.42 -1.6 1,510,472 + glpD MCAODC_07455 0.49 +2.8 1,510,498 + glpD MCAODC_07455 0.51 +0.3 1,510,499 - glpD MCAODC_07455 0.51 +0.8 1,510,499 - glpD MCAODC_07455 0.51 -0.7 1,510,499 - glpD MCAODC_07455 0.51 -0.2
Or see this region's nucleotide sequence