Experiment: WM_RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhiN and MCAODC_06965 are separated by 135 nucleotides MCAODC_06965 and yhiM are separated by 26 nucleotides yhiM and MCAODC_06975 are separated by 383 nucleotides
MCAODC_06960: yhiN - Uncharacterized protein YhiN, at 1,414,303 to 1,415,505
yhiN
MCAODC_06965: MCAODC_06965 - hypothetical protein, at 1,415,641 to 1,415,796
_06965
MCAODC_06970: yhiM - Inner membrane protein YhiM, at 1,415,823 to 1,416,875
yhiM
MCAODC_06975: MCAODC_06975 - DUF4049 domain-containing protein, at 1,417,259 to 1,418,869
_06975
Position (kb) 1415
1416
1417 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1414.824 kb on + strand, within yhiN at 1414.824 kb on + strand, within yhiN at 1414.824 kb on + strand, within yhiN at 1414.824 kb on + strand, within yhiN at 1414.824 kb on + strand, within yhiN at 1414.824 kb on + strand, within yhiN at 1414.825 kb on - strand, within yhiN at 1414.825 kb on - strand, within yhiN at 1414.893 kb on + strand, within yhiN at 1414.894 kb on - strand, within yhiN at 1414.894 kb on - strand, within yhiN at 1414.913 kb on + strand, within yhiN at 1414.913 kb on + strand, within yhiN at 1414.950 kb on + strand, within yhiN at 1414.985 kb on + strand, within yhiN at 1414.985 kb on + strand, within yhiN at 1414.986 kb on - strand, within yhiN at 1414.986 kb on - strand, within yhiN at 1414.986 kb on - strand, within yhiN at 1414.986 kb on - strand, within yhiN at 1415.038 kb on + strand, within yhiN at 1415.038 kb on + strand, within yhiN at 1415.039 kb on - strand, within yhiN at 1415.064 kb on + strand, within yhiN at 1415.065 kb on - strand, within yhiN at 1415.076 kb on - strand, within yhiN at 1415.163 kb on - strand, within yhiN at 1415.219 kb on + strand, within yhiN at 1415.256 kb on + strand, within yhiN at 1415.257 kb on - strand, within yhiN at 1415.257 kb on - strand, within yhiN at 1415.279 kb on + strand, within yhiN at 1415.279 kb on + strand, within yhiN at 1415.279 kb on + strand, within yhiN at 1415.394 kb on + strand at 1415.435 kb on - strand at 1415.436 kb on + strand at 1415.436 kb on + strand at 1415.436 kb on + strand at 1415.437 kb on - strand at 1415.437 kb on - strand at 1415.534 kb on - strand at 1415.582 kb on + strand at 1415.582 kb on + strand at 1415.621 kb on - strand at 1415.623 kb on + strand at 1415.624 kb on - strand at 1415.624 kb on - strand at 1415.625 kb on + strand at 1415.625 kb on + strand at 1415.625 kb on + strand at 1415.626 kb on - strand at 1415.626 kb on - strand at 1415.626 kb on - strand at 1415.626 kb on - strand at 1415.727 kb on + strand, within MCAODC_06965 at 1415.727 kb on + strand, within MCAODC_06965 at 1415.728 kb on - strand, within MCAODC_06965 at 1415.762 kb on + strand, within MCAODC_06965 at 1415.762 kb on + strand, within MCAODC_06965 at 1415.767 kb on - strand, within MCAODC_06965 at 1415.848 kb on - strand at 1415.851 kb on - strand at 1415.874 kb on - strand at 1415.915 kb on + strand at 1416.003 kb on + strand, within yhiM at 1416.027 kb on - strand, within yhiM at 1416.066 kb on + strand, within yhiM at 1416.066 kb on + strand, within yhiM at 1416.074 kb on - strand, within yhiM at 1416.074 kb on - strand, within yhiM at 1416.074 kb on - strand, within yhiM at 1416.101 kb on + strand, within yhiM at 1416.105 kb on - strand, within yhiM at 1416.142 kb on - strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.148 kb on + strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.149 kb on - strand, within yhiM at 1416.150 kb on + strand, within yhiM at 1416.150 kb on + strand, within yhiM at 1416.150 kb on + strand, within yhiM at 1416.150 kb on + strand, within yhiM at 1416.151 kb on - strand, within yhiM at 1416.151 kb on - strand, within yhiM at 1416.151 kb on - strand, within yhiM at 1416.186 kb on - strand, within yhiM at 1416.227 kb on + strand, within yhiM at 1416.231 kb on - strand, within yhiM at 1416.231 kb on - strand, within yhiM at 1416.231 kb on - strand, within yhiM at 1416.267 kb on + strand, within yhiM at 1416.267 kb on + strand, within yhiM at 1416.268 kb on - strand, within yhiM at 1416.300 kb on + strand, within yhiM at 1416.300 kb on + strand, within yhiM at 1416.301 kb on - strand, within yhiM at 1416.316 kb on + strand, within yhiM at 1416.327 kb on + strand, within yhiM at 1416.327 kb on + strand, within yhiM at 1416.327 kb on + strand, within yhiM at 1416.328 kb on - strand, within yhiM at 1416.338 kb on + strand, within yhiM at 1416.338 kb on + strand, within yhiM at 1416.338 kb on + strand, within yhiM at 1416.342 kb on + strand, within yhiM at 1416.342 kb on + strand, within yhiM at 1416.343 kb on - strand, within yhiM at 1416.350 kb on + strand, within yhiM at 1416.351 kb on - strand, within yhiM at 1416.351 kb on - strand, within yhiM at 1416.353 kb on + strand, within yhiM at 1416.353 kb on + strand, within yhiM at 1416.381 kb on + strand, within yhiM at 1416.408 kb on - strand, within yhiM at 1416.414 kb on + strand, within yhiM at 1416.424 kb on + strand, within yhiM at 1416.424 kb on + strand, within yhiM at 1416.425 kb on - strand, within yhiM at 1416.514 kb on - strand, within yhiM at 1416.514 kb on - strand, within yhiM at 1416.530 kb on + strand, within yhiM at 1416.530 kb on + strand, within yhiM at 1416.531 kb on - strand, within yhiM at 1416.531 kb on - strand, within yhiM at 1416.531 kb on - strand, within yhiM at 1416.620 kb on + strand, within yhiM at 1416.620 kb on + strand, within yhiM at 1416.701 kb on + strand, within yhiM at 1416.710 kb on + strand, within yhiM at 1416.710 kb on + strand, within yhiM at 1416.865 kb on + strand at 1416.866 kb on - strand at 1416.867 kb on + strand at 1416.868 kb on - strand at 1416.868 kb on - strand at 1416.868 kb on - strand at 1416.954 kb on + strand at 1416.974 kb on + strand at 1416.980 kb on - strand at 1416.980 kb on - strand at 1417.088 kb on + strand at 1417.161 kb on + strand at 1417.212 kb on + strand at 1417.282 kb on + strand at 1417.470 kb on + strand, within MCAODC_06975 at 1417.471 kb on - strand, within MCAODC_06975 at 1417.531 kb on + strand, within MCAODC_06975 at 1417.583 kb on - strand, within MCAODC_06975 at 1417.823 kb on + strand, within MCAODC_06975
Per-strain Table
Position Strand Gene LocusTag Fraction WM_RB68 remove 1,414,824 + yhiN MCAODC_06960 0.43 -0.4 1,414,824 + yhiN MCAODC_06960 0.43 -1.3 1,414,824 + yhiN MCAODC_06960 0.43 -1.3 1,414,824 + yhiN MCAODC_06960 0.43 +0.0 1,414,824 + yhiN MCAODC_06960 0.43 -0.6 1,414,824 + yhiN MCAODC_06960 0.43 +0.6 1,414,825 - yhiN MCAODC_06960 0.43 -1.5 1,414,825 - yhiN MCAODC_06960 0.43 +0.5 1,414,893 + yhiN MCAODC_06960 0.49 -1.4 1,414,894 - yhiN MCAODC_06960 0.49 +0.6 1,414,894 - yhiN MCAODC_06960 0.49 +0.9 1,414,913 + yhiN MCAODC_06960 0.51 -0.7 1,414,913 + yhiN MCAODC_06960 0.51 +0.5 1,414,950 + yhiN MCAODC_06960 0.54 +0.7 1,414,985 + yhiN MCAODC_06960 0.57 -1.0 1,414,985 + yhiN MCAODC_06960 0.57 +1.5 1,414,986 - yhiN MCAODC_06960 0.57 +1.3 1,414,986 - yhiN MCAODC_06960 0.57 +0.7 1,414,986 - yhiN MCAODC_06960 0.57 -0.1 1,414,986 - yhiN MCAODC_06960 0.57 +0.2 1,415,038 + yhiN MCAODC_06960 0.61 -1.0 1,415,038 + yhiN MCAODC_06960 0.61 -0.1 1,415,039 - yhiN MCAODC_06960 0.61 -0.4 1,415,064 + yhiN MCAODC_06960 0.63 +0.6 1,415,065 - yhiN MCAODC_06960 0.63 +0.1 1,415,076 - yhiN MCAODC_06960 0.64 +0.5 1,415,163 - yhiN MCAODC_06960 0.71 +0.5 1,415,219 + yhiN MCAODC_06960 0.76 +0.1 1,415,256 + yhiN MCAODC_06960 0.79 -0.8 1,415,257 - yhiN MCAODC_06960 0.79 -0.0 1,415,257 - yhiN MCAODC_06960 0.79 +1.8 1,415,279 + yhiN MCAODC_06960 0.81 -0.4 1,415,279 + yhiN MCAODC_06960 0.81 -0.5 1,415,279 + yhiN MCAODC_06960 0.81 -0.5 1,415,394 + +0.1 1,415,435 - -1.2 1,415,436 + +0.2 1,415,436 + +0.4 1,415,436 + -0.7 1,415,437 - +0.2 1,415,437 - -0.3 1,415,534 - +1.1 1,415,582 + -0.3 1,415,582 + +2.2 1,415,621 - -0.5 1,415,623 + -0.4 1,415,624 - +0.6 1,415,624 - -0.1 1,415,625 + -1.3 1,415,625 + -1.6 1,415,625 + +0.0 1,415,626 - -1.4 1,415,626 - +1.2 1,415,626 - +0.1 1,415,626 - -0.2 1,415,727 + MCAODC_06965 0.55 +1.7 1,415,727 + MCAODC_06965 0.55 +0.2 1,415,728 - MCAODC_06965 0.56 -0.8 1,415,762 + MCAODC_06965 0.78 -0.0 1,415,762 + MCAODC_06965 0.78 -0.4 1,415,767 - MCAODC_06965 0.81 +0.8 1,415,848 - -1.4 1,415,851 - +0.4 1,415,874 - -0.3 1,415,915 + +0.1 1,416,003 + yhiM MCAODC_06970 0.17 -0.0 1,416,027 - yhiM MCAODC_06970 0.19 +1.6 1,416,066 + yhiM MCAODC_06970 0.23 +0.3 1,416,066 + yhiM MCAODC_06970 0.23 -0.3 1,416,074 - yhiM MCAODC_06970 0.24 -0.4 1,416,074 - yhiM MCAODC_06970 0.24 +0.6 1,416,074 - yhiM MCAODC_06970 0.24 -0.1 1,416,101 + yhiM MCAODC_06970 0.26 +0.2 1,416,105 - yhiM MCAODC_06970 0.27 +0.5 1,416,142 - yhiM MCAODC_06970 0.30 +0.5 1,416,148 + yhiM MCAODC_06970 0.31 +3.3 1,416,148 + yhiM MCAODC_06970 0.31 -0.0 1,416,148 + yhiM MCAODC_06970 0.31 -0.3 1,416,148 + yhiM MCAODC_06970 0.31 +0.2 1,416,148 + yhiM MCAODC_06970 0.31 -1.5 1,416,148 + yhiM MCAODC_06970 0.31 +1.0 1,416,148 + yhiM MCAODC_06970 0.31 +0.3 1,416,148 + yhiM MCAODC_06970 0.31 +0.3 1,416,148 + yhiM MCAODC_06970 0.31 +0.4 1,416,148 + yhiM MCAODC_06970 0.31 -2.5 1,416,148 + yhiM MCAODC_06970 0.31 -1.6 1,416,149 - yhiM MCAODC_06970 0.31 -0.1 1,416,149 - yhiM MCAODC_06970 0.31 +0.2 1,416,149 - yhiM MCAODC_06970 0.31 +0.7 1,416,149 - yhiM MCAODC_06970 0.31 -0.3 1,416,149 - yhiM MCAODC_06970 0.31 +0.3 1,416,149 - yhiM MCAODC_06970 0.31 -1.0 1,416,149 - yhiM MCAODC_06970 0.31 -0.2 1,416,149 - yhiM MCAODC_06970 0.31 +1.2 1,416,149 - yhiM MCAODC_06970 0.31 +0.5 1,416,149 - yhiM MCAODC_06970 0.31 -0.9 1,416,149 - yhiM MCAODC_06970 0.31 +0.4 1,416,149 - yhiM MCAODC_06970 0.31 -0.3 1,416,149 - yhiM MCAODC_06970 0.31 -0.6 1,416,150 + yhiM MCAODC_06970 0.31 -0.2 1,416,150 + yhiM MCAODC_06970 0.31 -0.9 1,416,150 + yhiM MCAODC_06970 0.31 -0.2 1,416,150 + yhiM MCAODC_06970 0.31 -1.2 1,416,151 - yhiM MCAODC_06970 0.31 +1.6 1,416,151 - yhiM MCAODC_06970 0.31 -1.1 1,416,151 - yhiM MCAODC_06970 0.31 -0.8 1,416,186 - yhiM MCAODC_06970 0.34 -0.9 1,416,227 + yhiM MCAODC_06970 0.38 +0.7 1,416,231 - yhiM MCAODC_06970 0.39 +0.6 1,416,231 - yhiM MCAODC_06970 0.39 -0.8 1,416,231 - yhiM MCAODC_06970 0.39 +0.1 1,416,267 + yhiM MCAODC_06970 0.42 -0.4 1,416,267 + yhiM MCAODC_06970 0.42 +0.8 1,416,268 - yhiM MCAODC_06970 0.42 -1.0 1,416,300 + yhiM MCAODC_06970 0.45 -0.6 1,416,300 + yhiM MCAODC_06970 0.45 +3.7 1,416,301 - yhiM MCAODC_06970 0.45 -1.3 1,416,316 + yhiM MCAODC_06970 0.47 +0.1 1,416,327 + yhiM MCAODC_06970 0.48 -0.3 1,416,327 + yhiM MCAODC_06970 0.48 -0.3 1,416,327 + yhiM MCAODC_06970 0.48 +1.4 1,416,328 - yhiM MCAODC_06970 0.48 -0.0 1,416,338 + yhiM MCAODC_06970 0.49 +1.1 1,416,338 + yhiM MCAODC_06970 0.49 +0.4 1,416,338 + yhiM MCAODC_06970 0.49 +1.0 1,416,342 + yhiM MCAODC_06970 0.49 +1.3 1,416,342 + yhiM MCAODC_06970 0.49 +0.6 1,416,343 - yhiM MCAODC_06970 0.49 +2.1 1,416,350 + yhiM MCAODC_06970 0.50 -0.1 1,416,351 - yhiM MCAODC_06970 0.50 -0.4 1,416,351 - yhiM MCAODC_06970 0.50 +0.2 1,416,353 + yhiM MCAODC_06970 0.50 -0.4 1,416,353 + yhiM MCAODC_06970 0.50 +0.2 1,416,381 + yhiM MCAODC_06970 0.53 +0.4 1,416,408 - yhiM MCAODC_06970 0.56 -0.4 1,416,414 + yhiM MCAODC_06970 0.56 -0.4 1,416,424 + yhiM MCAODC_06970 0.57 -0.2 1,416,424 + yhiM MCAODC_06970 0.57 +0.2 1,416,425 - yhiM MCAODC_06970 0.57 +0.3 1,416,514 - yhiM MCAODC_06970 0.66 +2.2 1,416,514 - yhiM MCAODC_06970 0.66 -0.3 1,416,530 + yhiM MCAODC_06970 0.67 +0.7 1,416,530 + yhiM MCAODC_06970 0.67 +0.4 1,416,531 - yhiM MCAODC_06970 0.67 +0.2 1,416,531 - yhiM MCAODC_06970 0.67 +0.2 1,416,531 - yhiM MCAODC_06970 0.67 -0.2 1,416,620 + yhiM MCAODC_06970 0.76 -0.5 1,416,620 + yhiM MCAODC_06970 0.76 +1.0 1,416,701 + yhiM MCAODC_06970 0.83 +1.0 1,416,710 + yhiM MCAODC_06970 0.84 +0.5 1,416,710 + yhiM MCAODC_06970 0.84 +0.7 1,416,865 + +0.9 1,416,866 - -0.1 1,416,867 + -0.3 1,416,868 - -0.6 1,416,868 - +0.5 1,416,868 - +0.0 1,416,954 + +0.4 1,416,974 + -0.4 1,416,980 - -1.0 1,416,980 - +0.4 1,417,088 + +0.7 1,417,161 + +0.8 1,417,212 + -1.5 1,417,282 + +0.5 1,417,470 + MCAODC_06975 0.13 -1.4 1,417,471 - MCAODC_06975 0.13 -0.1 1,417,531 + MCAODC_06975 0.17 +0.7 1,417,583 - MCAODC_06975 0.20 -0.6 1,417,823 + MCAODC_06975 0.35 -0.1
Or see this region's nucleotide sequence