Strain Fitness in Escherichia coli ECRC101 around MCAODC_06300

Experiment: WM_RB68

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntehaG and MCAODC_06300 are separated by 43 nucleotidesMCAODC_06300 and yibL are separated by 644 nucleotides MCAODC_06295: ehaG - trimeric autotransporter adhesin EhaG, at 1,262,296 to 1,267,062 ehaG MCAODC_06300: MCAODC_06300 - DUF3251 domain-containing protein, at 1,267,106 to 1,267,687 _06300 MCAODC_06305: yibL - YibL family ribosome-associated protein, at 1,268,332 to 1,268,694 yibL Position (kb) 1267 1268Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1266.120 kb on + strand, within ehaGat 1266.120 kb on + strand, within ehaGat 1266.120 kb on + strand, within ehaGat 1266.121 kb on - strand, within ehaGat 1266.163 kb on + strand, within ehaGat 1266.163 kb on + strand, within ehaGat 1266.164 kb on - strand, within ehaGat 1266.164 kb on - strand, within ehaGat 1266.233 kb on - strand, within ehaGat 1266.246 kb on + strand, within ehaGat 1266.246 kb on + strand, within ehaGat 1266.246 kb on + strand, within ehaGat 1266.282 kb on + strand, within ehaGat 1266.282 kb on + strand, within ehaGat 1266.283 kb on - strand, within ehaGat 1266.283 kb on - strand, within ehaGat 1266.283 kb on - strand, within ehaGat 1266.285 kb on + strand, within ehaGat 1266.286 kb on - strand, within ehaGat 1266.286 kb on - strand, within ehaGat 1266.286 kb on - strand, within ehaGat 1266.286 kb on - strand, within ehaGat 1266.286 kb on - strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.327 kb on + strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.328 kb on - strand, within ehaGat 1266.331 kb on - strand, within ehaGat 1266.398 kb on - strand, within ehaGat 1266.398 kb on - strand, within ehaGat 1266.406 kb on - strand, within ehaGat 1266.429 kb on + strand, within ehaGat 1266.430 kb on - strand, within ehaGat 1266.452 kb on + strand, within ehaGat 1266.489 kb on + strand, within ehaGat 1266.490 kb on - strand, within ehaGat 1266.495 kb on + strand, within ehaGat 1266.495 kb on + strand, within ehaGat 1266.495 kb on + strand, within ehaGat 1266.495 kb on + strand, within ehaGat 1266.496 kb on - strand, within ehaGat 1266.510 kb on + strand, within ehaGat 1266.573 kb on + strand, within ehaGat 1266.574 kb on - strand, within ehaGat 1266.582 kb on + strand, within ehaGat 1266.583 kb on - strand, within ehaGat 1266.620 kb on + strandat 1266.656 kb on - strandat 1266.656 kb on - strandat 1266.657 kb on + strandat 1266.657 kb on + strandat 1266.676 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.744 kb on + strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.745 kb on - strandat 1266.746 kb on + strandat 1266.747 kb on - strandat 1266.760 kb on + strandat 1266.760 kb on + strandat 1266.760 kb on + strandat 1266.761 kb on - strandat 1266.761 kb on - strandat 1266.761 kb on - strandat 1266.763 kb on - strandat 1266.771 kb on - strandat 1266.804 kb on + strandat 1266.832 kb on + strandat 1266.833 kb on - strandat 1266.835 kb on - strandat 1266.835 kb on - strandat 1266.869 kb on + strandat 1266.964 kb on - strandat 1267.014 kb on + strandat 1267.016 kb on + strandat 1267.017 kb on - strandat 1267.097 kb on + strandat 1267.324 kb on - strand, within MCAODC_06300at 1267.580 kb on + strand, within MCAODC_06300at 1267.666 kb on + strandat 1267.693 kb on + strandat 1267.693 kb on + strandat 1267.848 kb on + strandat 1268.089 kb on + strandat 1268.196 kb on + strandat 1268.197 kb on - strandat 1268.220 kb on - strandat 1268.220 kb on - strandat 1268.281 kb on + strandat 1268.306 kb on - strandat 1268.591 kb on + strand, within yibLat 1268.591 kb on + strand, within yibL

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_RB68
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1,266,120 + ehaG MCAODC_06295 0.80 -1.2
1,266,120 + ehaG MCAODC_06295 0.80 -0.5
1,266,120 + ehaG MCAODC_06295 0.80 -0.5
1,266,121 - ehaG MCAODC_06295 0.80 +0.1
1,266,163 + ehaG MCAODC_06295 0.81 +0.2
1,266,163 + ehaG MCAODC_06295 0.81 -1.5
1,266,164 - ehaG MCAODC_06295 0.81 -1.7
1,266,164 - ehaG MCAODC_06295 0.81 +0.1
1,266,233 - ehaG MCAODC_06295 0.83 -0.5
1,266,246 + ehaG MCAODC_06295 0.83 +0.2
1,266,246 + ehaG MCAODC_06295 0.83 -1.8
1,266,246 + ehaG MCAODC_06295 0.83 +0.3
1,266,282 + ehaG MCAODC_06295 0.84 -0.6
1,266,282 + ehaG MCAODC_06295 0.84 +0.1
1,266,283 - ehaG MCAODC_06295 0.84 +0.2
1,266,283 - ehaG MCAODC_06295 0.84 +1.1
1,266,283 - ehaG MCAODC_06295 0.84 +0.0
1,266,285 + ehaG MCAODC_06295 0.84 +1.3
1,266,286 - ehaG MCAODC_06295 0.84 -0.0
1,266,286 - ehaG MCAODC_06295 0.84 +0.8
1,266,286 - ehaG MCAODC_06295 0.84 +0.5
1,266,286 - ehaG MCAODC_06295 0.84 -1.8
1,266,286 - ehaG MCAODC_06295 0.84 +1.0
1,266,327 + ehaG MCAODC_06295 0.85 +0.0
1,266,327 + ehaG MCAODC_06295 0.85 -0.1
1,266,327 + ehaG MCAODC_06295 0.85 -0.3
1,266,327 + ehaG MCAODC_06295 0.85 +0.5
1,266,327 + ehaG MCAODC_06295 0.85 -1.2
1,266,327 + ehaG MCAODC_06295 0.85 -1.2
1,266,327 + ehaG MCAODC_06295 0.85 -2.3
1,266,327 + ehaG MCAODC_06295 0.85 +1.1
1,266,328 - ehaG MCAODC_06295 0.85 -0.5
1,266,328 - ehaG MCAODC_06295 0.85 -0.0
1,266,328 - ehaG MCAODC_06295 0.85 -0.2
1,266,328 - ehaG MCAODC_06295 0.85 +0.4
1,266,328 - ehaG MCAODC_06295 0.85 +1.1
1,266,328 - ehaG MCAODC_06295 0.85 -0.0
1,266,328 - ehaG MCAODC_06295 0.85 -0.0
1,266,328 - ehaG MCAODC_06295 0.85 -0.5
1,266,328 - ehaG MCAODC_06295 0.85 -0.3
1,266,328 - ehaG MCAODC_06295 0.85 +0.6
1,266,331 - ehaG MCAODC_06295 0.85 -0.4
1,266,398 - ehaG MCAODC_06295 0.86 +0.2
1,266,398 - ehaG MCAODC_06295 0.86 +0.4
1,266,406 - ehaG MCAODC_06295 0.86 -3.0
1,266,429 + ehaG MCAODC_06295 0.87 +0.0
1,266,430 - ehaG MCAODC_06295 0.87 +0.1
1,266,452 + ehaG MCAODC_06295 0.87 -2.2
1,266,489 + ehaG MCAODC_06295 0.88 -0.1
1,266,490 - ehaG MCAODC_06295 0.88 -0.0
1,266,495 + ehaG MCAODC_06295 0.88 +0.2
1,266,495 + ehaG MCAODC_06295 0.88 +1.8
1,266,495 + ehaG MCAODC_06295 0.88 -1.0
1,266,495 + ehaG MCAODC_06295 0.88 +0.8
1,266,496 - ehaG MCAODC_06295 0.88 +0.3
1,266,510 + ehaG MCAODC_06295 0.88 -1.9
1,266,573 + ehaG MCAODC_06295 0.90 -2.0
1,266,574 - ehaG MCAODC_06295 0.90 +0.3
1,266,582 + ehaG MCAODC_06295 0.90 -0.9
1,266,583 - ehaG MCAODC_06295 0.90 +0.1
1,266,620 + -0.1
1,266,656 - -0.5
1,266,656 - +0.3
1,266,657 + +1.0
1,266,657 + +0.9
1,266,676 + -0.8
1,266,744 + +1.3
1,266,744 + -0.1
1,266,744 + -0.6
1,266,744 + -1.5
1,266,744 + -0.7
1,266,744 + -1.0
1,266,744 + -1.0
1,266,744 + +0.3
1,266,744 + -0.3
1,266,744 + +0.3
1,266,744 + +0.4
1,266,745 - -1.6
1,266,745 - -0.6
1,266,745 - -0.6
1,266,745 - +0.1
1,266,745 - -0.1
1,266,745 - +0.6
1,266,745 - -0.6
1,266,746 + +1.1
1,266,747 - +0.7
1,266,760 + -0.2
1,266,760 + +0.4
1,266,760 + +0.5
1,266,761 - -1.1
1,266,761 - +0.8
1,266,761 - +0.5
1,266,763 - +0.8
1,266,771 - +1.7
1,266,804 + -0.5
1,266,832 + -0.8
1,266,833 - +0.9
1,266,835 - +0.3
1,266,835 - -0.1
1,266,869 + -1.1
1,266,964 - -0.1
1,267,014 + +0.2
1,267,016 + +0.3
1,267,017 - +0.3
1,267,097 + +0.8
1,267,324 - MCAODC_06300 0.37 +0.8
1,267,580 + MCAODC_06300 0.81 -0.0
1,267,666 + +1.2
1,267,693 + -1.3
1,267,693 + -1.2
1,267,848 + -0.1
1,268,089 + +0.5
1,268,196 + -1.0
1,268,197 - -0.8
1,268,220 - +0.1
1,268,220 - +0.1
1,268,281 + -0.0
1,268,306 - -0.8
1,268,591 + yibL MCAODC_06305 0.71 -0.0
1,268,591 + yibL MCAODC_06305 0.71 +0.0

Or see this region's nucleotide sequence