Strain Fitness in Escherichia coli ECRC101 around MCAODC_03010

Experiment: WM_RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_RB68
606,266	+				-0.3
606,267	-				-1.2
606,278	+				+0.5
606,296	+				-0.1
606,297	-				-1.6
606,297	-				-0.1
606,346	+				+0.5
606,346	+				-0.6
606,346	+				+0.1
606,347	-				-1.0
606,356	-				+1.2
606,358	+				+0.9
606,367	+				+0.9
606,368	-				-0.5
606,370	+				+0.1
606,371	-				-0.3
606,382	+				+0.7
606,382	+				+0.6
606,413	+				+0.9
606,413	+				+0.2
606,527	-				-0.5
606,527	-				-1.0
606,583	-	ghoT	MCAODC_03000	0.28	+0.5
606,602	+	ghoT	MCAODC_03000	0.39	+0.2
606,603	-	ghoT	MCAODC_03000	0.40	-0.9
606,603	-	ghoT	MCAODC_03000	0.40	+0.8
606,603	-	ghoT	MCAODC_03000	0.40	-0.7
606,615	-	ghoT	MCAODC_03000	0.47	+0.4
606,712	+				+1.1
606,736	+				-2.1
606,758	-				-0.6
606,774	-	ghoS	MCAODC_03005	0.13	+1.9
606,807	+	ghoS	MCAODC_03005	0.24	+0.8
606,816	-	ghoS	MCAODC_03005	0.27	-0.0
606,894	+	ghoS	MCAODC_03005	0.54	-0.6
606,895	-	ghoS	MCAODC_03005	0.54	+0.5
606,918	-	ghoS	MCAODC_03005	0.62	+0.1
606,937	+	ghoS	MCAODC_03005	0.68	+0.0
606,938	-	ghoS	MCAODC_03005	0.68	-0.5
607,003	+				+0.6
607,004	-				-0.2
607,004	-				+3.9
607,004	-				-1.9
607,006	-				-0.3
607,008	-				-0.8
607,101	+				-0.4
607,101	+				+1.6
607,104	-				-0.1
607,130	-				+4.2
607,278	-				+1.8
607,278	-				-0.6
607,278	-				-0.7
607,420	-	yjdJ	MCAODC_03010	0.59	+0.6
607,495	-	yjdJ	MCAODC_03010	0.87	+1.2
607,533	+				+0.4
607,555	+				-1.4
607,580	+	yjdI	MCAODC_03015	0.16	+0.3
607,649	+	yjdI	MCAODC_03015	0.46	+0.6
607,650	-	yjdI	MCAODC_03015	0.47	+0.0
607,653	+	yjdI	MCAODC_03015	0.48	-0.4
607,671	+	yjdI	MCAODC_03015	0.56	-1.0
607,671	+	yjdI	MCAODC_03015	0.56	+0.6
607,672	-	yjdI	MCAODC_03015	0.56	+0.3
607,696	-	yjdI	MCAODC_03015	0.67	-1.4
607,696	-	yjdI	MCAODC_03015	0.67	-0.4
607,696	-	yjdI	MCAODC_03015	0.67	-1.7
607,735	+	yjdI	MCAODC_03015	0.84	+0.3
607,735	+	yjdI	MCAODC_03015	0.84	+0.6
607,736	-	yjdI	MCAODC_03015	0.84	+0.3
607,794	-				+0.6
607,805	+				-1.0
607,805	+				-0.4
607,805	+				-0.8
607,805	+				+0.0
607,807	+				-1.1
607,807	+				-0.3
607,807	+				+0.1
607,807	+				+0.2
607,808	-				+0.1
607,808	-				+0.9
607,808	-				+0.5
607,831	-				+1.5
607,869	+				-0.9
607,870	-				+0.0
607,870	-				-0.3
607,871	+				-0.9
607,871	+				-0.1
607,871	+				+0.6
607,871	+				+0.3
607,872	-				+0.7
607,872	-				-0.1
607,872	-				-0.9
607,873	+				+1.4
607,873	+				+0.5
607,873	+				-0.0
607,874	-				-2.2
607,874	-				+0.0
607,887	+				-1.8
607,887	+				-0.1
607,888	-				-0.1
607,919	+				+0.0
607,919	+				+1.7
607,981	+				-0.8
607,981	+				+0.2
608,020	+				-1.2
608,020	+				-0.1
608,020	+				-0.2
608,021	-				+0.6
608,021	-				-1.7
608,021	-				-0.5
608,071	-				+0.3
608,090	+				-0.0
608,091	-				-0.9
608,243	+	dcuS	MCAODC_03020	0.18	-0.4
608,243	+	dcuS	MCAODC_03020	0.18	+0.2
608,275	-	dcuS	MCAODC_03020	0.20	-0.2
608,298	-	dcuS	MCAODC_03020	0.21	-0.0
608,313	-	dcuS	MCAODC_03020	0.22	-0.0
608,331	-	dcuS	MCAODC_03020	0.23	-0.4
608,395	+	dcuS	MCAODC_03020	0.27	+0.1
608,395	+	dcuS	MCAODC_03020	0.27	+0.0
608,396	-	dcuS	MCAODC_03020	0.27	+1.0
608,409	+	dcuS	MCAODC_03020	0.28	+0.2
608,409	+	dcuS	MCAODC_03020	0.28	-0.3
608,410	-	dcuS	MCAODC_03020	0.28	+0.0
608,458	+	dcuS	MCAODC_03020	0.31	-0.7
608,501	+	dcuS	MCAODC_03020	0.34	+0.3
608,501	+	dcuS	MCAODC_03020	0.34	-0.3
608,501	+	dcuS	MCAODC_03020	0.34	-0.6
608,502	-	dcuS	MCAODC_03020	0.34	-0.9
608,515	+	dcuS	MCAODC_03020	0.34	+0.5
608,515	+	dcuS	MCAODC_03020	0.34	+0.1
608,516	-	dcuS	MCAODC_03020	0.34	+1.3
608,516	-	dcuS	MCAODC_03020	0.34	+1.8