Strain Fitness in Escherichia coli ECRC101 around MCAODC_26710

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
2,055,200	+				-2.5
2,055,200	+				-1.1
2,055,240	+				+0.3
2,055,241	-				-0.1
2,055,241	-				-0.4
2,055,254	-				-0.2
2,055,265	+				+0.5
2,055,279	+				-0.1
2,055,293	+				+0.6
2,055,302	+				+0.2
2,055,306	+				-0.2
2,055,307	-				+0.1
2,055,307	-				+0.6
2,055,374	-				+0.1
2,055,374	-				-0.3
2,055,388	+				+0.9
2,055,389	-				+1.6
2,055,389	-				-1.2
2,055,427	+				+0.3
2,055,433	+				-0.8
2,055,433	+				+0.1
2,055,434	-				-0.2
2,055,487	-				+0.1
2,055,487	-				-0.5
2,055,487	-				-0.4
2,055,544	+	rnk	MCAODC_26700	0.18	+0.4
2,055,726	+	rnk	MCAODC_26700	0.62	+0.0
2,055,752	+	rnk	MCAODC_26700	0.68	-0.4
2,055,847	+				+0.2
2,055,871	+				-0.3
2,055,893	-				+0.2
2,055,893	-				+0.6
2,055,893	-				+1.1
2,055,901	+				-1.9
2,055,901	+				+0.7
2,056,036	-	yldA	MCAODC_26705	0.18	+0.6
2,056,036	-	yldA	MCAODC_26705	0.18	-0.4
2,056,058	+	yldA	MCAODC_26705	0.42	+1.4
2,056,116	+				-2.3
2,056,117	-				-1.5
2,056,117	-				-0.4
2,056,117	-				-1.3
2,056,206	-				+0.6
2,056,269	-	ybdR	MCAODC_26710	0.13	+0.3
2,056,269	-	ybdR	MCAODC_26710	0.13	+0.6
2,056,270	+	ybdR	MCAODC_26710	0.13	+0.7
2,056,270	+	ybdR	MCAODC_26710	0.13	-0.3
2,056,270	+	ybdR	MCAODC_26710	0.13	-0.8
2,056,271	-	ybdR	MCAODC_26710	0.13	+0.1
2,056,271	-	ybdR	MCAODC_26710	0.13	+1.0
2,056,271	-	ybdR	MCAODC_26710	0.13	+1.2
2,056,271	-	ybdR	MCAODC_26710	0.13	+1.8
2,056,271	-	ybdR	MCAODC_26710	0.13	-0.7
2,056,271	-	ybdR	MCAODC_26710	0.13	+0.2
2,056,271	-	ybdR	MCAODC_26710	0.13	-0.3
2,056,271	-	ybdR	MCAODC_26710	0.13	-0.9
2,056,271	-	ybdR	MCAODC_26710	0.13	-2.4
2,056,315	-	ybdR	MCAODC_26710	0.16	+0.3
2,056,324	-	ybdR	MCAODC_26710	0.17	+0.4
2,056,324	-	ybdR	MCAODC_26710	0.17	-1.1
2,056,412	+	ybdR	MCAODC_26710	0.24	+0.5
2,056,469	+	ybdR	MCAODC_26710	0.29	-0.1
2,056,469	+	ybdR	MCAODC_26710	0.29	-0.9
2,056,469	+	ybdR	MCAODC_26710	0.29	+1.6
2,056,566	+	ybdR	MCAODC_26710	0.37	+0.3
2,056,566	+	ybdR	MCAODC_26710	0.37	+1.5
2,056,569	+	ybdR	MCAODC_26710	0.37	-0.2
2,056,569	+	ybdR	MCAODC_26710	0.37	-1.4
2,056,842	-	ybdR	MCAODC_26710	0.59	+0.1
2,056,925	-	ybdR	MCAODC_26710	0.66	+0.1
2,056,925	-	ybdR	MCAODC_26710	0.66	-0.1
2,056,954	+	ybdR	MCAODC_26710	0.68	+2.2
2,057,004	-	ybdR	MCAODC_26710	0.72	+0.7
2,057,004	-	ybdR	MCAODC_26710	0.72	-0.2
2,057,050	+	ybdR	MCAODC_26710	0.76	+0.1
2,057,050	+	ybdR	MCAODC_26710	0.76	-1.5
2,057,050	+	ybdR	MCAODC_26710	0.76	+0.2
2,057,051	-	ybdR	MCAODC_26710	0.76	+1.4
2,057,051	-	ybdR	MCAODC_26710	0.76	+1.2
2,057,051	-	ybdR	MCAODC_26710	0.76	-1.0
2,057,154	+	ybdR	MCAODC_26710	0.84	-0.1
2,057,259	-				-0.2
2,057,267	+				+0.4
2,057,268	-				-1.9
2,057,270	+				-1.3
2,057,270	+				+0.2
2,057,270	+				-0.3
2,057,271	-				-1.8
2,057,310	+				+0.0
2,057,336	-				+0.6
2,057,389	+				+0.3
2,057,395	+				+2.4
2,057,395	+				+0.0
2,057,395	+				+1.1
2,057,396	-				+1.8
2,057,400	-				+0.5
2,057,400	-				+0.5
2,057,463	-				+1.1
2,057,464	+				-1.7
2,057,464	+				-0.4
2,057,465	-				+0.1
2,057,521	+				+0.4
2,057,524	+				+0.7
2,057,526	+				-1.4
2,057,527	-				+1.2
2,057,554	+				+0.3
2,057,554	+				-0.1
2,057,571	+				+1.5
2,057,571	+				+0.8
2,057,571	+				-0.4
2,057,575	+				-2.6
2,057,575	+				+0.7
2,057,575	+				+0.5
2,057,575	+				-0.6
2,057,575	+				+1.9
2,057,575	+				-0.8
2,057,575	+				+0.6
2,057,577	+				+0.1
2,057,577	+				-0.3
2,057,577	+				-0.0
2,057,577	+				-0.5
2,057,589	+				-0.1
2,057,671	-	uspG	MCAODC_26715	0.23	-0.4
2,057,687	+	uspG	MCAODC_26715	0.27	+1.6
2,057,687	+	uspG	MCAODC_26715	0.27	+0.7
2,057,688	-	uspG	MCAODC_26715	0.27	+0.1
2,057,871	-	uspG	MCAODC_26715	0.70	+1.3
2,057,897	+	uspG	MCAODC_26715	0.76	-0.3
2,057,897	+	uspG	MCAODC_26715	0.76	-0.3
2,057,940	-	uspG	MCAODC_26715	0.86	-2.2
2,057,947	-	uspG	MCAODC_26715	0.87	+0.1
2,057,985	-				-1.8
2,058,005	+				-0.7
2,058,005	+				+0.2
2,058,011	+				-1.1
2,058,015	+				-0.2
2,058,016	-				-0.2
2,058,113	-				+0.1
2,058,219	+				+1.4
2,058,219	+				+0.4
2,058,220	-				+0.3
2,058,294	+		MCAODC_26720	0.11	+1.5