Strain Fitness in Escherichia coli ECRC101 around MCAODC_24615

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
1,628,483	+	yccS	MCAODC_24610	0.52	+0.5
1,628,498	+	yccS	MCAODC_24610	0.53	+0.5
1,628,571	+	yccS	MCAODC_24610	0.56	+0.0
1,628,571	+	yccS	MCAODC_24610	0.56	+0.7
1,628,649	+	yccS	MCAODC_24610	0.60	+0.1
1,628,649	+	yccS	MCAODC_24610	0.60	-0.8
1,628,649	+	yccS	MCAODC_24610	0.60	+0.3
1,628,649	+	yccS	MCAODC_24610	0.60	+0.6
1,628,650	-	yccS	MCAODC_24610	0.60	+0.6
1,628,650	-	yccS	MCAODC_24610	0.60	+0.5
1,628,650	-	yccS	MCAODC_24610	0.60	+0.3
1,628,652	-	yccS	MCAODC_24610	0.60	+1.0
1,628,685	-	yccS	MCAODC_24610	0.62	+0.9
1,628,691	-	yccS	MCAODC_24610	0.62	+0.8
1,628,698	+	yccS	MCAODC_24610	0.62	+1.2
1,628,698	+	yccS	MCAODC_24610	0.62	-1.2
1,628,699	-	yccS	MCAODC_24610	0.62	-2.0
1,628,702	+	yccS	MCAODC_24610	0.63	+0.3
1,628,702	+	yccS	MCAODC_24610	0.63	-1.0
1,628,808	+	yccS	MCAODC_24610	0.67	+0.7
1,628,809	-	yccS	MCAODC_24610	0.67	+0.3
1,628,845	+	yccS	MCAODC_24610	0.69	-0.2
1,628,897	-	yccS	MCAODC_24610	0.72	-0.9
1,628,943	+	yccS	MCAODC_24610	0.74	-0.1
1,628,944	-	yccS	MCAODC_24610	0.74	+0.6
1,628,944	-	yccS	MCAODC_24610	0.74	-0.6
1,629,039	+	yccS	MCAODC_24610	0.78	+0.0
1,629,040	-	yccS	MCAODC_24610	0.78	-1.4
1,629,069	+	yccS	MCAODC_24610	0.79	+0.4
1,629,075	-	yccS	MCAODC_24610	0.80	-0.8
1,629,131	+	yccS	MCAODC_24610	0.82	-2.5
1,629,131	+	yccS	MCAODC_24610	0.82	-1.4
1,629,131	+	yccS	MCAODC_24610	0.82	+0.1
1,629,131	+	yccS	MCAODC_24610	0.82	+1.4
1,629,132	-	yccS	MCAODC_24610	0.82	-0.3
1,629,132	-	yccS	MCAODC_24610	0.82	-0.3
1,629,132	-	yccS	MCAODC_24610	0.82	-0.8
1,629,206	+	yccS	MCAODC_24610	0.86	-2.4
1,629,206	+	yccS	MCAODC_24610	0.86	+0.6
1,629,206	+	yccS	MCAODC_24610	0.86	+0.2
1,629,213	+	yccS	MCAODC_24610	0.86	-0.8
1,629,214	-	yccS	MCAODC_24610	0.86	+0.1
1,629,214	-	yccS	MCAODC_24610	0.86	-1.5
1,629,215	+	yccS	MCAODC_24610	0.86	-0.9
1,629,247	+	yccS	MCAODC_24610	0.88	-1.9
1,629,251	+	yccS	MCAODC_24610	0.88	-1.0
1,629,291	+	yccS	MCAODC_24610	0.90	+0.3
1,629,307	+				+1.2
1,629,349	+				+0.7
1,629,350	-				-0.2
1,629,350	-				+0.9
1,629,350	-				-0.9
1,629,430	+				-2.4
1,629,430	+				+0.9
1,629,597	+	sxy	MCAODC_24615	0.19	-0.0
1,629,668	-	sxy	MCAODC_24615	0.31	+0.4
1,629,668	-	sxy	MCAODC_24615	0.31	-1.0
1,629,668	-	sxy	MCAODC_24615	0.31	-0.6
1,629,669	+	sxy	MCAODC_24615	0.31	-0.4
1,629,669	+	sxy	MCAODC_24615	0.31	-0.4
1,629,669	+	sxy	MCAODC_24615	0.31	+1.9
1,629,669	+	sxy	MCAODC_24615	0.31	-0.2
1,629,670	-	sxy	MCAODC_24615	0.31	+0.4
1,629,670	-	sxy	MCAODC_24615	0.31	-0.0
1,629,674	-	sxy	MCAODC_24615	0.32	+0.4
1,629,674	-	sxy	MCAODC_24615	0.32	+0.1
1,629,683	-	sxy	MCAODC_24615	0.33	+0.1
1,629,690	+	sxy	MCAODC_24615	0.34	+0.6
1,629,732	+	sxy	MCAODC_24615	0.41	+0.6
1,629,733	-	sxy	MCAODC_24615	0.41	-0.5
1,629,733	-	sxy	MCAODC_24615	0.41	+0.1
1,629,842	-	sxy	MCAODC_24615	0.58	+0.0
1,629,860	+	sxy	MCAODC_24615	0.61	+0.6
1,629,861	-	sxy	MCAODC_24615	0.61	+2.2
1,629,863	+	sxy	MCAODC_24615	0.62	-0.4
1,629,864	-	sxy	MCAODC_24615	0.62	+1.6
1,629,895	-	sxy	MCAODC_24615	0.67	-0.3
1,629,895	-	sxy	MCAODC_24615	0.67	+0.9
1,629,895	-	sxy	MCAODC_24615	0.67	-0.6
1,629,895	-	sxy	MCAODC_24615	0.67	-1.1
1,629,896	+	sxy	MCAODC_24615	0.67	-1.6
1,629,897	-	sxy	MCAODC_24615	0.67	-0.3
1,629,929	+	sxy	MCAODC_24615	0.72	+0.4
1,629,929	+	sxy	MCAODC_24615	0.72	+1.2
1,629,929	+	sxy	MCAODC_24615	0.72	-0.2
1,630,061	+				+1.1
1,630,062	-				+0.7
1,630,062	-				-0.7
1,630,062	-				-0.8
1,630,075	-				-0.6
1,630,076	+				-0.4
1,630,088	+				-1.4
1,630,181	-				-0.6
1,630,187	-				+0.2
1,630,205	-				-0.3
1,630,254	-				-0.4
1,630,287	-				-0.6
1,630,322	+				+0.9
1,630,322	+				+1.1
1,630,322	+				+0.9
1,630,322	+				-0.8
1,630,323	-				-0.1
1,630,323	-				-0.4
1,630,323	-				+0.5
1,630,323	-				+0.7
1,630,323	-				-0.7
1,630,323	-				-0.8
1,630,323	-				+1.9
1,630,326	+				+0.8
1,630,338	+				+1.4
1,630,468	+	sulA	MCAODC_24620	0.28	+0.5
1,630,484	-	sulA	MCAODC_24620	0.32	+0.3
1,630,523	-	sulA	MCAODC_24620	0.39	+0.4
1,630,585	+	sulA	MCAODC_24620	0.51	+0.4
1,630,656	+	sulA	MCAODC_24620	0.65	+0.4
1,630,657	-	sulA	MCAODC_24620	0.65	-0.2
1,630,657	-	sulA	MCAODC_24620	0.65	+1.6
1,630,751	+	sulA	MCAODC_24620	0.84	+0.1
1,630,752	-	sulA	MCAODC_24620	0.84	+0.2
1,630,752	-	sulA	MCAODC_24620	0.84	-0.1
1,630,755	-	sulA	MCAODC_24620	0.85	-0.1
1,630,755	-	sulA	MCAODC_24620	0.85	-0.8
1,630,804	+				-0.4
1,630,969	+				-0.2
1,630,976	-				-0.1
1,630,976	-				+0.4
1,630,980	+				-0.6
1,630,980	+				+0.5
1,630,980	+				-1.0
1,630,980	+				-0.8
1,630,982	+				+0.7
1,630,982	+				+0.8
1,630,982	+				+1.0
1,630,982	+				+0.3
1,631,036	+				-0.9
1,631,050	+				+1.2
1,631,050	+				+0.8
1,631,050	+				-0.5
1,631,051	-				-1.1
1,631,073	+				-0.1
1,631,096	+				-1.0
1,631,096	+				+0.7