Strain Fitness in Escherichia coli ECRC101 around MCAODC_14305

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
2,810,456	-		MCAODC_14285	0.36	+1.6
2,810,532	+		MCAODC_14285	0.82	+0.5
2,810,577	+				-0.2
2,810,577	+				+0.1
2,810,578	-				+0.1
2,810,580	+				+0.3
2,810,581	-				+0.0
2,810,606	-				+0.2
2,810,612	+				-0.3
2,810,622	-		MCAODC_14290	0.21	-0.9
2,810,698	+				+0.1
2,810,801	+	napF	MCAODC_14295	0.26	+1.0
2,811,014	+	napF	MCAODC_14295	0.69	+0.3
2,811,015	-	napF	MCAODC_14295	0.70	-2.4
2,811,036	-	napF	MCAODC_14295	0.74	+0.9
2,811,063	+	napF	MCAODC_14295	0.79	+1.1
2,811,064	-	napF	MCAODC_14295	0.80	+0.6
2,811,077	+	napF	MCAODC_14295	0.82	+0.7
2,811,077	+	napF	MCAODC_14295	0.82	-0.0
2,811,077	+	napF	MCAODC_14295	0.82	+0.1
2,811,077	+	napF	MCAODC_14295	0.82	+0.2
2,811,077	+	napF	MCAODC_14295	0.82	-0.0
2,811,080	+	napF	MCAODC_14295	0.83	-0.5
2,811,127	+				-0.2
2,811,136	+				+0.8
2,811,136	+				-0.0
2,811,163	-				-0.2
2,811,163	-				-1.1
2,811,350	+	napD	MCAODC_14300	0.74	-2.3
2,811,351	-	napD	MCAODC_14300	0.75	+0.3
2,811,380	-	napD	MCAODC_14300	0.86	+0.9
2,811,380	-	napD	MCAODC_14300	0.86	-0.3
2,811,380	-	napD	MCAODC_14300	0.86	-1.7
2,811,437	+				-0.6
2,811,660	-				-0.0
2,811,660	-				-0.0
2,811,688	-	napA	MCAODC_14305	0.11	-0.2
2,811,688	-	napA	MCAODC_14305	0.11	+0.2
2,811,735	-	napA	MCAODC_14305	0.13	-0.1
2,811,735	-	napA	MCAODC_14305	0.13	+0.1
2,811,738	+	napA	MCAODC_14305	0.13	+0.9
2,811,739	-	napA	MCAODC_14305	0.13	-2.0
2,811,739	-	napA	MCAODC_14305	0.13	-1.6
2,811,739	-	napA	MCAODC_14305	0.13	+0.3
2,811,845	+	napA	MCAODC_14305	0.17	+1.0
2,811,846	-	napA	MCAODC_14305	0.17	+0.4
2,811,846	-	napA	MCAODC_14305	0.17	-0.9
2,811,869	+	napA	MCAODC_14305	0.18	+1.1
2,811,870	-	napA	MCAODC_14305	0.18	-0.8
2,811,902	+	napA	MCAODC_14305	0.20	+0.3
2,811,950	+	napA	MCAODC_14305	0.22	+0.7
2,811,951	-	napA	MCAODC_14305	0.22	-0.5
2,811,975	-	napA	MCAODC_14305	0.23	-0.8
2,812,011	+	napA	MCAODC_14305	0.24	+0.3
2,812,012	-	napA	MCAODC_14305	0.24	+0.9
2,812,098	-	napA	MCAODC_14305	0.28	-0.8
2,812,157	+	napA	MCAODC_14305	0.30	-0.9
2,812,158	-	napA	MCAODC_14305	0.30	-0.1
2,812,190	+	napA	MCAODC_14305	0.31	-0.0
2,812,191	-	napA	MCAODC_14305	0.31	-0.1
2,812,221	+	napA	MCAODC_14305	0.32	+1.5
2,812,233	+	napA	MCAODC_14305	0.33	+0.5
2,812,234	-	napA	MCAODC_14305	0.33	+1.7
2,812,234	-	napA	MCAODC_14305	0.33	+0.4
2,812,236	-	napA	MCAODC_14305	0.33	-2.3
2,812,256	-	napA	MCAODC_14305	0.34	+1.3
2,812,322	-	napA	MCAODC_14305	0.37	+0.7
2,812,399	-	napA	MCAODC_14305	0.40	-0.0
2,812,399	-	napA	MCAODC_14305	0.40	-1.5
2,812,419	+	napA	MCAODC_14305	0.40	+0.4
2,812,420	-	napA	MCAODC_14305	0.40	+0.1
2,812,420	-	napA	MCAODC_14305	0.40	-0.6
2,812,420	-	napA	MCAODC_14305	0.40	+0.7
2,812,421	+	napA	MCAODC_14305	0.40	+0.2
2,812,421	+	napA	MCAODC_14305	0.40	-0.0
2,812,422	-	napA	MCAODC_14305	0.41	-0.0
2,812,422	-	napA	MCAODC_14305	0.41	-0.1
2,812,422	-	napA	MCAODC_14305	0.41	-0.3
2,812,489	-	napA	MCAODC_14305	0.43	-1.5
2,812,658	+	napA	MCAODC_14305	0.50	-0.4
2,812,659	-	napA	MCAODC_14305	0.50	+0.6
2,812,712	-	napA	MCAODC_14305	0.52	+1.6
2,812,712	-	napA	MCAODC_14305	0.52	+0.1
2,812,853	+	napA	MCAODC_14305	0.58	+0.4
2,812,883	+	napA	MCAODC_14305	0.59	+0.1
2,812,884	-	napA	MCAODC_14305	0.59	-0.1
2,812,999	+	napA	MCAODC_14305	0.64	+1.5
2,813,016	+	napA	MCAODC_14305	0.64	-0.4
2,813,036	+	napA	MCAODC_14305	0.65	+0.1
2,813,059	+	napA	MCAODC_14305	0.66	+0.8
2,813,060	-	napA	MCAODC_14305	0.66	+1.0
2,813,060	-	napA	MCAODC_14305	0.66	+0.8
2,813,098	+	napA	MCAODC_14305	0.68	+0.3
2,813,134	+	napA	MCAODC_14305	0.69	-0.0
2,813,134	+	napA	MCAODC_14305	0.69	+1.8
2,813,188	-	napA	MCAODC_14305	0.71	-0.1
2,813,199	+	napA	MCAODC_14305	0.72	-0.5
2,813,200	-	napA	MCAODC_14305	0.72	+0.9
2,813,310	+	napA	MCAODC_14305	0.76	-0.5
2,813,311	-	napA	MCAODC_14305	0.76	-0.8
2,813,361	+	napA	MCAODC_14305	0.78	-2.0
2,813,433	-	napA	MCAODC_14305	0.81	+1.5
2,813,464	-	napA	MCAODC_14305	0.82	-0.3
2,813,466	-	napA	MCAODC_14305	0.83	+0.3
2,813,490	-	napA	MCAODC_14305	0.83	+1.3
2,813,490	-	napA	MCAODC_14305	0.83	+0.3
2,813,600	+	napA	MCAODC_14305	0.88	+0.1
2,813,655	-				+0.5
2,813,784	+				+1.9
2,813,784	+				-0.7
2,813,785	-				+0.0
2,813,785	-				-0.9
2,813,785	-				+0.1
2,813,785	-				+0.1
2,813,785	-				-0.8
2,813,898	+				+0.6
2,813,898	+				-0.1
2,813,899	-				-0.2
2,813,899	-				-0.7
2,813,906	+				+0.4
2,813,906	+				-0.3
2,813,906	+				+0.2
2,813,906	+				+0.7
2,813,906	+				+0.6
2,813,907	-				+0.9
2,813,907	-				-1.4
2,814,134	-	napG	MCAODC_14310	0.33	-0.4
2,814,178	-	napG	MCAODC_14310	0.39	+0.2
2,814,302	-	napG	MCAODC_14310	0.57	+0.5
2,814,464	+	napG	MCAODC_14310	0.80	-1.2
2,814,465	-	napG	MCAODC_14310	0.80	-1.9
2,814,550	+				-1.3
2,814,550	+				+0.1
2,814,551	-				+0.8
2,814,600	+				+0.7
2,814,748	+	napH	MCAODC_14315	0.18	-0.8
2,814,748	+	napH	MCAODC_14315	0.18	+0.6
2,814,748	+	napH	MCAODC_14315	0.18	+0.2
2,814,748	+	napH	MCAODC_14315	0.18	-0.7
2,814,748	+	napH	MCAODC_14315	0.18	+0.7
2,814,748	+	napH	MCAODC_14315	0.18	+0.3
2,814,748	+	napH	MCAODC_14315	0.18	+0.4
2,814,748	+	napH	MCAODC_14315	0.18	+0.0
2,814,748	+	napH	MCAODC_14315	0.18	+0.3
2,814,749	-	napH	MCAODC_14315	0.19	+0.6
2,814,749	-	napH	MCAODC_14315	0.19	-0.9
2,814,751	-	napH	MCAODC_14315	0.19	-2.5
2,814,764	+	napH	MCAODC_14315	0.20	-0.2
2,814,764	+	napH	MCAODC_14315	0.20	-0.7
2,814,862	-	napH	MCAODC_14315	0.32	-0.4
2,814,875	-	napH	MCAODC_14315	0.33	+1.8
2,814,875	-	napH	MCAODC_14315	0.33	+0.5
2,814,896	+	napH	MCAODC_14315	0.36	-2.4