Strain Fitness in Escherichia coli ECRC101 around MCAODC_03050
Experiment: WM_TP9
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | WM_TP9 |
---|---|---|---|---|---|
remove | |||||
615,378 | - | melB | MCAODC_03045 | 0.39 | -1.2 |
615,378 | - | melB | MCAODC_03045 | 0.39 | -0.2 |
615,381 | + | melB | MCAODC_03045 | 0.39 | +0.8 |
615,382 | - | melB | MCAODC_03045 | 0.39 | -1.6 |
615,382 | - | melB | MCAODC_03045 | 0.39 | +0.5 |
615,382 | - | melB | MCAODC_03045 | 0.39 | +0.0 |
615,397 | - | melB | MCAODC_03045 | 0.40 | +0.1 |
615,436 | + | melB | MCAODC_03045 | 0.43 | +0.1 |
615,439 | + | melB | MCAODC_03045 | 0.43 | +0.6 |
615,439 | + | melB | MCAODC_03045 | 0.43 | +0.1 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +0.9 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +0.2 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +1.4 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +0.3 |
615,469 | + | melB | MCAODC_03045 | 0.46 | -0.0 |
615,469 | + | melB | MCAODC_03045 | 0.46 | -0.6 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +0.5 |
615,469 | + | melB | MCAODC_03045 | 0.46 | -0.9 |
615,469 | + | melB | MCAODC_03045 | 0.46 | +0.3 |
615,470 | - | melB | MCAODC_03045 | 0.46 | -0.1 |
615,470 | - | melB | MCAODC_03045 | 0.46 | +0.4 |
615,470 | - | melB | MCAODC_03045 | 0.46 | -0.2 |
615,470 | - | melB | MCAODC_03045 | 0.46 | +1.7 |
615,478 | + | melB | MCAODC_03045 | 0.46 | +0.2 |
615,479 | - | melB | MCAODC_03045 | 0.46 | -0.5 |
615,479 | - | melB | MCAODC_03045 | 0.46 | -0.2 |
615,481 | + | melB | MCAODC_03045 | 0.46 | +0.6 |
615,481 | + | melB | MCAODC_03045 | 0.46 | -1.7 |
615,481 | + | melB | MCAODC_03045 | 0.46 | -0.2 |
615,481 | + | melB | MCAODC_03045 | 0.46 | -0.6 |
615,482 | - | melB | MCAODC_03045 | 0.47 | +0.6 |
615,482 | - | melB | MCAODC_03045 | 0.47 | -0.3 |
615,485 | + | melB | MCAODC_03045 | 0.47 | -0.3 |
615,485 | + | melB | MCAODC_03045 | 0.47 | -0.4 |
615,500 | + | melB | MCAODC_03045 | 0.48 | +0.0 |
615,500 | + | melB | MCAODC_03045 | 0.48 | -0.4 |
615,514 | - | melB | MCAODC_03045 | 0.49 | -1.3 |
615,518 | + | melB | MCAODC_03045 | 0.49 | +0.4 |
615,519 | - | melB | MCAODC_03045 | 0.49 | +0.6 |
615,519 | - | melB | MCAODC_03045 | 0.49 | +2.0 |
615,519 | - | melB | MCAODC_03045 | 0.49 | -0.0 |
615,520 | + | melB | MCAODC_03045 | 0.49 | -0.1 |
615,520 | + | melB | MCAODC_03045 | 0.49 | +0.1 |
615,521 | - | melB | MCAODC_03045 | 0.49 | -0.4 |
615,565 | + | melB | MCAODC_03045 | 0.52 | +0.2 |
615,565 | + | melB | MCAODC_03045 | 0.52 | -1.0 |
615,570 | - | melB | MCAODC_03045 | 0.53 | -0.2 |
615,587 | + | melB | MCAODC_03045 | 0.54 | -0.5 |
615,588 | - | melB | MCAODC_03045 | 0.54 | -0.7 |
615,678 | - | melB | MCAODC_03045 | 0.60 | +0.6 |
615,742 | + | melB | MCAODC_03045 | 0.65 | -0.2 |
615,742 | + | melB | MCAODC_03045 | 0.65 | +0.2 |
615,743 | - | melB | MCAODC_03045 | 0.65 | -1.1 |
615,743 | - | melB | MCAODC_03045 | 0.65 | -0.6 |
615,743 | - | melB | MCAODC_03045 | 0.65 | +0.9 |
615,743 | - | melB | MCAODC_03045 | 0.65 | -2.0 |
615,743 | - | melB | MCAODC_03045 | 0.65 | +0.1 |
615,747 | - | melB | MCAODC_03045 | 0.65 | -0.3 |
615,875 | + | melB | MCAODC_03045 | 0.74 | +0.1 |
615,876 | - | melB | MCAODC_03045 | 0.74 | +0.4 |
615,889 | + | melB | MCAODC_03045 | 0.75 | +0.2 |
615,889 | + | melB | MCAODC_03045 | 0.75 | +0.4 |
615,890 | - | melB | MCAODC_03045 | 0.75 | -1.1 |
615,910 | + | melB | MCAODC_03045 | 0.77 | +1.3 |
615,910 | + | melB | MCAODC_03045 | 0.77 | -0.9 |
615,910 | + | melB | MCAODC_03045 | 0.77 | -0.5 |
615,911 | - | melB | MCAODC_03045 | 0.77 | +0.8 |
615,911 | - | melB | MCAODC_03045 | 0.77 | -0.1 |
615,911 | - | melB | MCAODC_03045 | 0.77 | +1.0 |
615,911 | - | melB | MCAODC_03045 | 0.77 | -0.6 |
615,911 | - | melB | MCAODC_03045 | 0.77 | -1.1 |
615,938 | + | melB | MCAODC_03045 | 0.79 | -0.1 |
615,939 | - | melB | MCAODC_03045 | 0.79 | +0.2 |
615,941 | + | melB | MCAODC_03045 | 0.79 | +0.3 |
615,942 | - | melB | MCAODC_03045 | 0.79 | -0.7 |
615,942 | - | melB | MCAODC_03045 | 0.79 | -0.2 |
615,963 | - | melB | MCAODC_03045 | 0.81 | -0.3 |
615,975 | + | melB | MCAODC_03045 | 0.81 | -1.7 |
615,975 | + | melB | MCAODC_03045 | 0.81 | -0.0 |
615,975 | + | melB | MCAODC_03045 | 0.81 | -0.0 |
615,976 | - | melB | MCAODC_03045 | 0.82 | -0.4 |
615,976 | - | melB | MCAODC_03045 | 0.82 | +0.2 |
615,976 | - | melB | MCAODC_03045 | 0.82 | -0.3 |
615,998 | + | melB | MCAODC_03045 | 0.83 | +1.3 |
615,998 | + | melB | MCAODC_03045 | 0.83 | +0.6 |
615,999 | - | melB | MCAODC_03045 | 0.83 | -0.3 |
616,050 | + | melB | MCAODC_03045 | 0.87 | +0.1 |
616,050 | + | melB | MCAODC_03045 | 0.87 | -0.5 |
616,050 | + | melB | MCAODC_03045 | 0.87 | -2.3 |
616,050 | + | melB | MCAODC_03045 | 0.87 | +1.4 |
616,051 | - | melB | MCAODC_03045 | 0.87 | -0.1 |
616,051 | - | melB | MCAODC_03045 | 0.87 | -1.0 |
616,064 | + | melB | MCAODC_03045 | 0.88 | +1.0 |
616,079 | + | melB | MCAODC_03045 | 0.89 | -0.8 |
616,079 | + | melB | MCAODC_03045 | 0.89 | -0.4 |
616,079 | + | melB | MCAODC_03045 | 0.89 | +1.0 |
616,080 | - | melB | MCAODC_03045 | 0.89 | +0.2 |
616,080 | - | melB | MCAODC_03045 | 0.89 | +0.3 |
616,080 | - | melB | MCAODC_03045 | 0.89 | -0.6 |
616,080 | - | melB | MCAODC_03045 | 0.89 | +0.6 |
616,112 | + | +0.0 | |||
616,151 | - | +0.8 | |||
616,153 | + | -0.1 | |||
616,154 | - | +0.8 | |||
616,154 | - | +0.1 | |||
616,156 | + | +0.9 | |||
616,156 | + | +0.3 | |||
616,156 | + | +0.5 | |||
616,156 | + | -0.6 | |||
616,156 | + | -0.6 | |||
616,156 | + | -0.5 | |||
616,156 | + | +1.9 | |||
616,156 | + | +0.1 | |||
616,157 | - | -0.1 | |||
616,157 | - | +0.6 | |||
616,157 | - | -0.8 | |||
616,157 | - | +0.6 | |||
616,157 | - | -0.3 | |||
616,165 | + | +0.0 | |||
616,165 | + | +0.2 | |||
616,166 | - | +0.4 | |||
616,166 | - | -0.3 | |||
616,166 | - | +0.1 | |||
616,169 | + | +0.2 | |||
616,169 | + | -0.3 | |||
616,169 | + | -1.3 | |||
616,169 | + | -0.7 | |||
616,169 | + | +0.6 | |||
616,169 | + | +0.6 | |||
616,169 | + | +0.0 | |||
616,169 | + | +1.8 | |||
616,169 | + | +0.3 | |||
616,169 | + | +0.4 | |||
616,169 | + | +0.1 | |||
616,169 | + | +1.1 | |||
616,169 | + | +0.0 | |||
616,170 | - | +0.5 | |||
616,170 | - | -1.5 | |||
616,170 | - | -0.2 | |||
616,170 | - | +0.8 | |||
616,170 | - | -1.6 | |||
616,170 | - | +0.1 | |||
616,170 | - | -0.4 | |||
616,170 | - | +0.1 | |||
616,170 | - | +0.1 | |||
616,171 | + | -3.0 | |||
616,171 | + | +0.1 | |||
616,171 | + | -1.0 | |||
616,171 | + | -0.9 | |||
616,172 | - | -1.4 | |||
616,172 | - | +1.3 | |||
616,172 | - | +0.4 | |||
616,172 | - | +0.1 | |||
616,172 | - | +0.2 | |||
616,172 | - | +0.6 | |||
616,172 | - | +0.9 | |||
616,172 | - | -0.2 | |||
616,172 | - | +0.2 | |||
616,172 | - | -1.1 | |||
616,172 | - | -0.7 | |||
616,172 | - | -1.6 | |||
616,172 | - | -0.1 | |||
616,216 | + | -0.1 | |||
616,217 | - | -0.6 | |||
616,229 | + | -0.3 | |||
616,229 | + | +0.5 | |||
616,229 | + | +0.3 | |||
616,287 | - | +0.5 | |||
616,292 | + | +0.3 | |||
616,316 | + | -3.7 | |||
616,317 | - | +0.1 | |||
616,340 | + | +1.0 | |||
616,351 | + | -1.2 | |||
616,351 | + | -0.6 | |||
616,415 | - | +0.3 | |||
616,415 | - | +0.1 | |||
616,415 | - | +0.4 | |||
616,416 | + | -2.3 | |||
616,416 | + | +0.2 | |||
616,416 | + | -1.0 | |||
616,416 | + | -0.4 | |||
616,416 | + | -0.9 | |||
616,417 | - | +0.4 | |||
616,417 | - | -0.0 | |||
616,417 | - | +1.0 | |||
616,417 | - | -0.4 | |||
616,417 | - | +0.2 | |||
616,417 | - | +0.1 | |||
616,417 | - | -0.8 | |||
616,417 | - | -0.3 | |||
616,445 | + | -0.3 | |||
616,445 | + | -0.8 | |||
616,471 | + | -0.4 | |||
616,494 | - | melA | MCAODC_03050 | 0.11 | +0.6 |
616,499 | + | melA | MCAODC_03050 | 0.11 | +0.1 |
616,499 | + | melA | MCAODC_03050 | 0.11 | -0.2 |
616,500 | - | melA | MCAODC_03050 | 0.11 | +0.7 |
616,521 | + | melA | MCAODC_03050 | 0.13 | +0.6 |
616,521 | + | melA | MCAODC_03050 | 0.13 | +0.3 |
616,521 | + | melA | MCAODC_03050 | 0.13 | -0.3 |
616,521 | + | melA | MCAODC_03050 | 0.13 | +0.8 |
616,522 | - | melA | MCAODC_03050 | 0.13 | -0.2 |
616,522 | - | melA | MCAODC_03050 | 0.13 | -1.4 |
616,522 | - | melA | MCAODC_03050 | 0.13 | +0.2 |
616,522 | - | melA | MCAODC_03050 | 0.13 | -2.1 |
616,563 | + | melA | MCAODC_03050 | 0.16 | +0.1 |
616,563 | + | melA | MCAODC_03050 | 0.16 | +0.3 |
616,563 | + | melA | MCAODC_03050 | 0.16 | +0.0 |
616,564 | - | melA | MCAODC_03050 | 0.16 | +0.3 |
616,595 | + | melA | MCAODC_03050 | 0.18 | +0.2 |
616,595 | + | melA | MCAODC_03050 | 0.18 | +0.1 |
616,596 | - | melA | MCAODC_03050 | 0.18 | +0.5 |
616,676 | - | melA | MCAODC_03050 | 0.24 | -1.5 |
616,703 | + | melA | MCAODC_03050 | 0.26 | +1.5 |
616,703 | + | melA | MCAODC_03050 | 0.26 | +0.4 |
616,742 | + | melA | MCAODC_03050 | 0.29 | +0.5 |
616,742 | + | melA | MCAODC_03050 | 0.29 | +0.1 |
616,745 | + | melA | MCAODC_03050 | 0.29 | +0.0 |
616,746 | - | melA | MCAODC_03050 | 0.29 | -1.4 |
616,746 | - | melA | MCAODC_03050 | 0.29 | +0.1 |
616,767 | - | melA | MCAODC_03050 | 0.31 | -0.6 |
616,767 | - | melA | MCAODC_03050 | 0.31 | -0.9 |
616,767 | - | melA | MCAODC_03050 | 0.31 | +0.8 |
616,784 | + | melA | MCAODC_03050 | 0.32 | -0.1 |
616,785 | - | melA | MCAODC_03050 | 0.32 | -0.1 |
616,785 | - | melA | MCAODC_03050 | 0.32 | +0.0 |
616,785 | - | melA | MCAODC_03050 | 0.32 | -0.3 |
616,837 | - | melA | MCAODC_03050 | 0.36 | -0.3 |
616,837 | - | melA | MCAODC_03050 | 0.36 | +0.9 |
616,841 | + | melA | MCAODC_03050 | 0.36 | -0.4 |
616,842 | - | melA | MCAODC_03050 | 0.36 | +1.0 |
616,842 | - | melA | MCAODC_03050 | 0.36 | -0.8 |
616,842 | - | melA | MCAODC_03050 | 0.36 | +0.3 |
616,877 | + | melA | MCAODC_03050 | 0.39 | +0.7 |
616,891 | + | melA | MCAODC_03050 | 0.40 | +2.0 |
616,892 | - | melA | MCAODC_03050 | 0.40 | +0.2 |
616,928 | - | melA | MCAODC_03050 | 0.43 | -0.3 |
616,928 | - | melA | MCAODC_03050 | 0.43 | -0.1 |
616,962 | - | melA | MCAODC_03050 | 0.45 | -0.5 |
616,962 | - | melA | MCAODC_03050 | 0.45 | +0.7 |
616,962 | - | melA | MCAODC_03050 | 0.45 | -0.5 |
617,017 | + | melA | MCAODC_03050 | 0.49 | -0.0 |
617,018 | - | melA | MCAODC_03050 | 0.49 | +0.6 |
617,018 | - | melA | MCAODC_03050 | 0.49 | +0.2 |
617,050 | + | melA | MCAODC_03050 | 0.52 | -2.0 |
617,050 | + | melA | MCAODC_03050 | 0.52 | +1.4 |
617,097 | - | melA | MCAODC_03050 | 0.55 | +0.2 |
617,105 | + | melA | MCAODC_03050 | 0.56 | +0.4 |
617,208 | - | melA | MCAODC_03050 | 0.63 | -0.4 |
617,224 | + | melA | MCAODC_03050 | 0.64 | +0.5 |
617,224 | + | melA | MCAODC_03050 | 0.64 | +0.5 |
617,224 | + | melA | MCAODC_03050 | 0.64 | -0.7 |
617,224 | + | melA | MCAODC_03050 | 0.64 | +0.3 |
617,224 | + | melA | MCAODC_03050 | 0.64 | -1.0 |
617,225 | - | melA | MCAODC_03050 | 0.65 | +0.6 |
617,225 | - | melA | MCAODC_03050 | 0.65 | -1.0 |
617,225 | - | melA | MCAODC_03050 | 0.65 | -1.0 |
617,225 | - | melA | MCAODC_03050 | 0.65 | -0.3 |
617,237 | + | melA | MCAODC_03050 | 0.65 | +0.4 |
617,238 | - | melA | MCAODC_03050 | 0.65 | +0.6 |
617,260 | + | melA | MCAODC_03050 | 0.67 | +1.2 |
617,260 | + | melA | MCAODC_03050 | 0.67 | -0.1 |
617,260 | + | melA | MCAODC_03050 | 0.67 | +0.1 |
617,260 | + | melA | MCAODC_03050 | 0.67 | -0.8 |
617,261 | - | melA | MCAODC_03050 | 0.67 | +0.5 |
617,261 | - | melA | MCAODC_03050 | 0.67 | +0.8 |
617,261 | - | melA | MCAODC_03050 | 0.67 | +0.5 |
617,261 | - | melA | MCAODC_03050 | 0.67 | -0.1 |
617,261 | - | melA | MCAODC_03050 | 0.67 | -0.0 |
617,261 | - | melA | MCAODC_03050 | 0.67 | +0.2 |
617,261 | - | melA | MCAODC_03050 | 0.67 | -0.7 |
617,330 | + | melA | MCAODC_03050 | 0.72 | -1.1 |
617,330 | + | melA | MCAODC_03050 | 0.72 | -0.1 |
617,331 | - | melA | MCAODC_03050 | 0.72 | +0.4 |
617,334 | + | melA | MCAODC_03050 | 0.73 | +0.5 |
617,335 | - | melA | MCAODC_03050 | 0.73 | -0.0 |
617,345 | + | melA | MCAODC_03050 | 0.73 | +0.1 |
617,345 | + | melA | MCAODC_03050 | 0.73 | -0.8 |
617,345 | + | melA | MCAODC_03050 | 0.73 | +0.1 |
617,345 | + | melA | MCAODC_03050 | 0.73 | +0.3 |
617,346 | - | melA | MCAODC_03050 | 0.73 | -1.5 |
617,346 | - | melA | MCAODC_03050 | 0.73 | -0.3 |
617,346 | - | melA | MCAODC_03050 | 0.73 | -0.2 |
617,349 | - | melA | MCAODC_03050 | 0.74 | +0.4 |
617,349 | - | melA | MCAODC_03050 | 0.74 | +0.7 |
617,366 | + | melA | MCAODC_03050 | 0.75 | -1.1 |
617,366 | + | melA | MCAODC_03050 | 0.75 | -0.5 |
617,399 | + | melA | MCAODC_03050 | 0.77 | +0.4 |
617,478 | + | melA | MCAODC_03050 | 0.83 | -1.0 |
617,543 | + | melA | MCAODC_03050 | 0.88 | +0.9 |
617,543 | + | melA | MCAODC_03050 | 0.88 | -1.7 |
617,543 | + | melA | MCAODC_03050 | 0.88 | +0.5 |
617,555 | + | melA | MCAODC_03050 | 0.89 | -0.0 |
617,555 | + | melA | MCAODC_03050 | 0.89 | +0.5 |
617,556 | - | melA | MCAODC_03050 | 0.89 | +0.2 |
617,685 | - | +0.2 | |||
617,685 | - | -0.2 | |||
617,730 | - | +0.7 | |||
617,957 | - | -0.5 | |||
617,957 | - | +0.3 | |||
617,957 | - | +1.5 | |||
617,993 | + | -0.2 | |||
617,993 | + | +0.3 | |||
617,993 | + | +1.0 | |||
617,993 | + | -1.6 | |||
617,994 | - | -0.2 | |||
617,994 | - | +0.4 | |||
617,994 | - | -1.6 | |||
617,994 | - | +0.1 | |||
617,999 | + | -0.4 | |||
617,999 | + | -1.0 | |||
617,999 | + | +0.4 | |||
617,999 | + | +0.2 | |||
618,000 | - | -0.1 | |||
618,000 | - | +0.9 | |||
618,000 | - | -0.6 | |||
618,000 | - | +0.2 | |||
618,000 | - | +0.4 | |||
618,005 | + | -0.2 | |||
618,005 | + | -1.2 | |||
618,005 | + | -0.5 | |||
618,005 | + | -0.3 | |||
618,005 | + | +0.1 | |||
618,006 | - | -1.6 | |||
618,006 | - | +0.1 | |||
618,006 | - | -0.2 | |||
618,006 | - | -0.3 | |||
618,006 | - | +0.4 | |||
618,095 | + | melR | MCAODC_03055 | 0.12 | +1.0 |
618,096 | - | melR | MCAODC_03055 | 0.12 | -0.3 |
618,224 | + | melR | MCAODC_03055 | 0.26 | +0.4 |
618,225 | - | melR | MCAODC_03055 | 0.26 | +0.5 |
618,365 | + | melR | MCAODC_03055 | 0.41 | +0.4 |
618,365 | + | melR | MCAODC_03055 | 0.41 | +0.7 |
618,412 | + | melR | MCAODC_03055 | 0.47 | +0.4 |
618,413 | - | melR | MCAODC_03055 | 0.47 | -0.5 |
618,479 | + | melR | MCAODC_03055 | 0.54 | +0.9 |
618,561 | + | melR | MCAODC_03055 | 0.63 | +0.3 |
618,562 | - | melR | MCAODC_03055 | 0.63 | +0.3 |
618,562 | - | melR | MCAODC_03055 | 0.63 | +1.2 |
618,562 | - | melR | MCAODC_03055 | 0.63 | +0.2 |
618,597 | + | melR | MCAODC_03055 | 0.67 | +0.1 |
618,644 | + | melR | MCAODC_03055 | 0.72 | -0.2 |
618,702 | + | melR | MCAODC_03055 | 0.79 | -0.2 |
618,702 | + | melR | MCAODC_03055 | 0.79 | +0.5 |
618,702 | + | melR | MCAODC_03055 | 0.79 | +0.5 |
618,703 | - | melR | MCAODC_03055 | 0.79 | -0.1 |
618,703 | - | melR | MCAODC_03055 | 0.79 | +1.6 |
Or see this region's nucleotide sequence