Experiment: WM_TP9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MCAODC_27745 and malZ are separated by 187 nucleotides malZ and proY are separated by 155 nucleotides
MCAODC_27745: MCAODC_27745 - hypothetical protein, at 2,292,537 to 2,293,982
_27745
MCAODC_27750: malZ - maltodextrin glucosidase, at 2,294,170 to 2,295,987
malZ
MCAODC_27755: proY - proline-specific permease ProY, at 2,296,143 to 2,297,516
proY
Position (kb)
2294
2295
2296 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2293.229 kb on - strand, within MCAODC_27745 at 2293.254 kb on + strand, within MCAODC_27745 at 2293.284 kb on - strand, within MCAODC_27745 at 2293.317 kb on + strand, within MCAODC_27745 at 2293.344 kb on - strand, within MCAODC_27745 at 2293.513 kb on + strand, within MCAODC_27745 at 2293.523 kb on + strand, within MCAODC_27745 at 2293.526 kb on + strand, within MCAODC_27745 at 2293.607 kb on + strand, within MCAODC_27745 at 2293.622 kb on + strand, within MCAODC_27745 at 2293.638 kb on - strand, within MCAODC_27745 at 2293.652 kb on - strand, within MCAODC_27745 at 2293.830 kb on + strand, within MCAODC_27745 at 2294.021 kb on + strand at 2294.021 kb on + strand at 2294.025 kb on + strand at 2294.025 kb on + strand at 2294.045 kb on - strand at 2294.151 kb on - strand at 2294.171 kb on + strand at 2294.171 kb on + strand at 2294.356 kb on + strand, within malZ at 2294.357 kb on - strand, within malZ at 2294.368 kb on - strand, within malZ at 2294.445 kb on - strand, within malZ at 2294.557 kb on + strand, within malZ at 2294.557 kb on + strand, within malZ at 2294.640 kb on + strand, within malZ at 2294.641 kb on - strand, within malZ at 2294.661 kb on + strand, within malZ at 2294.668 kb on - strand, within malZ at 2294.668 kb on - strand, within malZ at 2294.668 kb on - strand, within malZ at 2294.668 kb on - strand, within malZ at 2294.668 kb on - strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.671 kb on + strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.672 kb on - strand, within malZ at 2294.703 kb on - strand, within malZ at 2294.706 kb on + strand, within malZ at 2294.707 kb on - strand, within malZ at 2294.707 kb on - strand, within malZ at 2294.722 kb on - strand, within malZ at 2294.753 kb on + strand, within malZ at 2294.753 kb on + strand, within malZ at 2294.839 kb on + strand, within malZ at 2294.840 kb on - strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.875 kb on + strand, within malZ at 2294.876 kb on - strand, within malZ at 2294.876 kb on - strand, within malZ at 2294.876 kb on - strand, within malZ at 2294.876 kb on - strand, within malZ at 2294.877 kb on + strand, within malZ at 2294.877 kb on + strand, within malZ at 2294.877 kb on + strand, within malZ at 2294.877 kb on + strand, within malZ at 2294.878 kb on - strand, within malZ at 2294.878 kb on - strand, within malZ at 2294.879 kb on + strand, within malZ at 2294.879 kb on + strand, within malZ at 2294.879 kb on + strand, within malZ at 2294.879 kb on + strand, within malZ at 2294.879 kb on + strand, within malZ at 2294.880 kb on - strand, within malZ at 2294.880 kb on - strand, within malZ at 2294.880 kb on - strand, within malZ at 2294.938 kb on - strand, within malZ at 2294.967 kb on + strand, within malZ at 2294.967 kb on + strand, within malZ at 2294.967 kb on + strand, within malZ at 2294.967 kb on + strand, within malZ at 2294.967 kb on + strand, within malZ at 2294.968 kb on - strand, within malZ at 2294.968 kb on - strand, within malZ at 2295.030 kb on + strand, within malZ at 2295.030 kb on + strand, within malZ at 2295.031 kb on - strand, within malZ at 2295.031 kb on - strand, within malZ at 2295.031 kb on - strand, within malZ at 2295.077 kb on + strand, within malZ at 2295.135 kb on + strand, within malZ at 2295.290 kb on - strand, within malZ at 2295.338 kb on + strand, within malZ at 2295.353 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.358 kb on - strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.362 kb on - strand, within malZ at 2295.362 kb on - strand, within malZ at 2295.461 kb on + strand, within malZ at 2295.462 kb on - strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.708 kb on + strand, within malZ at 2295.709 kb on - strand, within malZ at 2295.749 kb on + strand, within malZ at 2295.749 kb on + strand, within malZ at 2295.750 kb on - strand, within malZ at 2295.831 kb on + strand at 2295.831 kb on + strand at 2295.870 kb on + strand at 2295.879 kb on + strand at 2295.879 kb on + strand at 2295.880 kb on - strand at 2295.880 kb on - strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.979 kb on + strand at 2295.979 kb on + strand at 2295.980 kb on - strand at 2295.980 kb on - strand at 2295.987 kb on + strand at 2295.988 kb on - strand at 2295.988 kb on - strand at 2296.023 kb on + strand at 2296.023 kb on + strand at 2296.024 kb on - strand at 2296.028 kb on + strand at 2296.028 kb on + strand at 2296.029 kb on - strand at 2296.029 kb on - strand at 2296.141 kb on + strand at 2296.141 kb on + strand at 2296.142 kb on - strand at 2296.144 kb on + strand at 2296.182 kb on - strand at 2296.228 kb on + strand at 2296.228 kb on + strand at 2296.229 kb on - strand at 2296.238 kb on + strand at 2296.275 kb on - strand at 2296.275 kb on - strand at 2296.329 kb on - strand, within proY at 2296.344 kb on - strand, within proY at 2296.397 kb on + strand, within proY at 2296.398 kb on - strand, within proY at 2296.468 kb on + strand, within proY at 2296.468 kb on + strand, within proY at 2296.469 kb on - strand, within proY at 2296.477 kb on + strand, within proY at 2296.478 kb on - strand, within proY at 2296.500 kb on - strand, within proY at 2296.584 kb on - strand, within proY at 2296.611 kb on + strand, within proY at 2296.612 kb on - strand, within proY at 2296.612 kb on - strand, within proY at 2296.612 kb on - strand, within proY at 2296.622 kb on + strand, within proY at 2296.622 kb on + strand, within proY at 2296.622 kb on + strand, within proY at 2296.623 kb on - strand, within proY at 2296.658 kb on + strand, within proY at 2296.679 kb on + strand, within proY at 2296.679 kb on + strand, within proY at 2296.688 kb on + strand, within proY at 2296.744 kb on + strand, within proY at 2296.745 kb on - strand, within proY at 2296.748 kb on + strand, within proY at 2296.749 kb on - strand, within proY at 2296.754 kb on + strand, within proY at 2296.754 kb on + strand, within proY at 2296.754 kb on + strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.777 kb on + strand, within proY at 2296.777 kb on + strand, within proY at 2296.777 kb on + strand, within proY at 2296.778 kb on - strand, within proY at 2296.809 kb on - strand, within proY at 2296.857 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.961 kb on + strand, within proY
Per-strain Table
Position Strand Gene LocusTag Fraction WM_TP9 remove 2,293,229 - MCAODC_27745 0.48 +1.0 2,293,254 + MCAODC_27745 0.50 +0.7 2,293,284 - MCAODC_27745 0.52 -0.6 2,293,317 + MCAODC_27745 0.54 -0.8 2,293,344 - MCAODC_27745 0.56 -0.0 2,293,513 + MCAODC_27745 0.67 -0.7 2,293,523 + MCAODC_27745 0.68 -0.6 2,293,526 + MCAODC_27745 0.68 +0.0 2,293,607 + MCAODC_27745 0.74 -3.8 2,293,622 + MCAODC_27745 0.75 +0.3 2,293,638 - MCAODC_27745 0.76 -1.9 2,293,652 - MCAODC_27745 0.77 +0.8 2,293,830 + MCAODC_27745 0.89 -0.7 2,294,021 + +0.6 2,294,021 + +0.1 2,294,025 + -2.7 2,294,025 + +0.7 2,294,045 - -0.8 2,294,151 - +1.5 2,294,171 + +3.3 2,294,171 + +0.4 2,294,356 + malZ MCAODC_27750 0.10 -1.9 2,294,357 - malZ MCAODC_27750 0.10 +1.4 2,294,368 - malZ MCAODC_27750 0.11 +0.6 2,294,445 - malZ MCAODC_27750 0.15 +0.2 2,294,557 + malZ MCAODC_27750 0.21 -2.1 2,294,557 + malZ MCAODC_27750 0.21 +0.4 2,294,640 + malZ MCAODC_27750 0.26 -2.7 2,294,641 - malZ MCAODC_27750 0.26 -0.9 2,294,661 + malZ MCAODC_27750 0.27 -0.8 2,294,668 - malZ MCAODC_27750 0.27 +1.1 2,294,668 - malZ MCAODC_27750 0.27 +1.0 2,294,668 - malZ MCAODC_27750 0.27 +0.5 2,294,668 - malZ MCAODC_27750 0.27 -0.8 2,294,668 - malZ MCAODC_27750 0.27 -1.0 2,294,671 + malZ MCAODC_27750 0.28 -0.1 2,294,671 + malZ MCAODC_27750 0.28 +0.6 2,294,671 + malZ MCAODC_27750 0.28 +0.2 2,294,671 + malZ MCAODC_27750 0.28 -0.6 2,294,671 + malZ MCAODC_27750 0.28 +0.4 2,294,671 + malZ MCAODC_27750 0.28 -3.1 2,294,671 + malZ MCAODC_27750 0.28 +0.7 2,294,671 + malZ MCAODC_27750 0.28 +0.0 2,294,672 - malZ MCAODC_27750 0.28 +0.2 2,294,672 - malZ MCAODC_27750 0.28 +0.3 2,294,672 - malZ MCAODC_27750 0.28 -0.8 2,294,672 - malZ MCAODC_27750 0.28 +0.1 2,294,672 - malZ MCAODC_27750 0.28 -1.3 2,294,672 - malZ MCAODC_27750 0.28 -1.3 2,294,672 - malZ MCAODC_27750 0.28 +0.4 2,294,672 - malZ MCAODC_27750 0.28 +0.3 2,294,672 - malZ MCAODC_27750 0.28 +0.6 2,294,703 - malZ MCAODC_27750 0.29 +0.6 2,294,706 + malZ MCAODC_27750 0.29 +0.5 2,294,707 - malZ MCAODC_27750 0.30 -1.2 2,294,707 - malZ MCAODC_27750 0.30 +0.1 2,294,722 - malZ MCAODC_27750 0.30 +0.7 2,294,753 + malZ MCAODC_27750 0.32 -3.7 2,294,753 + malZ MCAODC_27750 0.32 +0.2 2,294,839 + malZ MCAODC_27750 0.37 -0.9 2,294,840 - malZ MCAODC_27750 0.37 +0.7 2,294,875 + malZ MCAODC_27750 0.39 -0.4 2,294,875 + malZ MCAODC_27750 0.39 +0.3 2,294,875 + malZ MCAODC_27750 0.39 +0.2 2,294,875 + malZ MCAODC_27750 0.39 +0.1 2,294,875 + malZ MCAODC_27750 0.39 -1.6 2,294,875 + malZ MCAODC_27750 0.39 +0.4 2,294,876 - malZ MCAODC_27750 0.39 +0.1 2,294,876 - malZ MCAODC_27750 0.39 +1.0 2,294,876 - malZ MCAODC_27750 0.39 -0.0 2,294,876 - malZ MCAODC_27750 0.39 -0.1 2,294,877 + malZ MCAODC_27750 0.39 +1.8 2,294,877 + malZ MCAODC_27750 0.39 -0.2 2,294,877 + malZ MCAODC_27750 0.39 +1.0 2,294,877 + malZ MCAODC_27750 0.39 -2.0 2,294,878 - malZ MCAODC_27750 0.39 +2.7 2,294,878 - malZ MCAODC_27750 0.39 -0.0 2,294,879 + malZ MCAODC_27750 0.39 +0.9 2,294,879 + malZ MCAODC_27750 0.39 +0.5 2,294,879 + malZ MCAODC_27750 0.39 +0.4 2,294,879 + malZ MCAODC_27750 0.39 -1.6 2,294,879 + malZ MCAODC_27750 0.39 -0.6 2,294,880 - malZ MCAODC_27750 0.39 +0.1 2,294,880 - malZ MCAODC_27750 0.39 +0.5 2,294,880 - malZ MCAODC_27750 0.39 -0.6 2,294,938 - malZ MCAODC_27750 0.42 +0.5 2,294,967 + malZ MCAODC_27750 0.44 +0.9 2,294,967 + malZ MCAODC_27750 0.44 +0.0 2,294,967 + malZ MCAODC_27750 0.44 +1.0 2,294,967 + malZ MCAODC_27750 0.44 -1.7 2,294,967 + malZ MCAODC_27750 0.44 +1.0 2,294,968 - malZ MCAODC_27750 0.44 -1.6 2,294,968 - malZ MCAODC_27750 0.44 -0.2 2,295,030 + malZ MCAODC_27750 0.47 +2.3 2,295,030 + malZ MCAODC_27750 0.47 +1.5 2,295,031 - malZ MCAODC_27750 0.47 +1.5 2,295,031 - malZ MCAODC_27750 0.47 +0.4 2,295,031 - malZ MCAODC_27750 0.47 +0.2 2,295,077 + malZ MCAODC_27750 0.50 -3.3 2,295,135 + malZ MCAODC_27750 0.53 -2.3 2,295,290 - malZ MCAODC_27750 0.62 -2.2 2,295,338 + malZ MCAODC_27750 0.64 +0.3 2,295,353 + malZ MCAODC_27750 0.65 -0.6 2,295,357 + malZ MCAODC_27750 0.65 +0.3 2,295,357 + malZ MCAODC_27750 0.65 -2.4 2,295,357 + malZ MCAODC_27750 0.65 -0.2 2,295,358 - malZ MCAODC_27750 0.65 -0.6 2,295,361 + malZ MCAODC_27750 0.66 +0.4 2,295,361 + malZ MCAODC_27750 0.66 +0.7 2,295,361 + malZ MCAODC_27750 0.66 +0.3 2,295,362 - malZ MCAODC_27750 0.66 +0.0 2,295,362 - malZ MCAODC_27750 0.66 -0.7 2,295,461 + malZ MCAODC_27750 0.71 +0.8 2,295,462 - malZ MCAODC_27750 0.71 +0.3 2,295,542 + malZ MCAODC_27750 0.75 +0.7 2,295,542 + malZ MCAODC_27750 0.75 -0.6 2,295,542 + malZ MCAODC_27750 0.75 +3.2 2,295,542 + malZ MCAODC_27750 0.75 +0.8 2,295,542 + malZ MCAODC_27750 0.75 -1.0 2,295,545 + malZ MCAODC_27750 0.76 +1.3 2,295,545 + malZ MCAODC_27750 0.76 -2.6 2,295,545 + malZ MCAODC_27750 0.76 +0.5 2,295,545 + malZ MCAODC_27750 0.76 +0.3 2,295,546 - malZ MCAODC_27750 0.76 -0.3 2,295,546 - malZ MCAODC_27750 0.76 -0.2 2,295,546 - malZ MCAODC_27750 0.76 -0.1 2,295,546 - malZ MCAODC_27750 0.76 -1.0 2,295,579 + malZ MCAODC_27750 0.78 -0.7 2,295,579 + malZ MCAODC_27750 0.78 +1.0 2,295,579 + malZ MCAODC_27750 0.78 +0.7 2,295,708 + malZ MCAODC_27750 0.85 +0.5 2,295,709 - malZ MCAODC_27750 0.85 -2.3 2,295,749 + malZ MCAODC_27750 0.87 -0.7 2,295,749 + malZ MCAODC_27750 0.87 +0.9 2,295,750 - malZ MCAODC_27750 0.87 +0.2 2,295,831 + +0.4 2,295,831 + +1.8 2,295,870 + -2.0 2,295,879 + -0.2 2,295,879 + +0.6 2,295,880 - +1.5 2,295,880 - -0.1 2,295,918 + +0.8 2,295,918 + -1.2 2,295,918 + +0.1 2,295,918 + +0.0 2,295,919 - +0.2 2,295,919 - +0.6 2,295,919 - +0.4 2,295,919 - +0.4 2,295,979 + -1.5 2,295,979 + -0.4 2,295,980 - +0.5 2,295,980 - -1.3 2,295,987 + -0.0 2,295,988 - +1.0 2,295,988 - -3.5 2,296,023 + +0.9 2,296,023 + -1.0 2,296,024 - -0.6 2,296,028 + +0.8 2,296,028 + +0.2 2,296,029 - +0.1 2,296,029 - +0.5 2,296,141 + +2.1 2,296,141 + +1.9 2,296,142 - +0.3 2,296,144 + +0.2 2,296,182 - +0.1 2,296,228 + -0.6 2,296,228 + -0.9 2,296,229 - +1.3 2,296,238 + -1.3 2,296,275 - +0.8 2,296,275 - -0.7 2,296,329 - proY MCAODC_27755 0.14 -1.2 2,296,344 - proY MCAODC_27755 0.15 +0.2 2,296,397 + proY MCAODC_27755 0.18 -0.6 2,296,398 - proY MCAODC_27755 0.19 +0.2 2,296,468 + proY MCAODC_27755 0.24 -0.1 2,296,468 + proY MCAODC_27755 0.24 +0.4 2,296,469 - proY MCAODC_27755 0.24 +0.5 2,296,477 + proY MCAODC_27755 0.24 +1.5 2,296,478 - proY MCAODC_27755 0.24 -0.6 2,296,500 - proY MCAODC_27755 0.26 +0.3 2,296,584 - proY MCAODC_27755 0.32 -1.0 2,296,611 + proY MCAODC_27755 0.34 +1.4 2,296,612 - proY MCAODC_27755 0.34 -1.5 2,296,612 - proY MCAODC_27755 0.34 +0.7 2,296,612 - proY MCAODC_27755 0.34 -1.3 2,296,622 + proY MCAODC_27755 0.35 -0.4 2,296,622 + proY MCAODC_27755 0.35 -3.0 2,296,622 + proY MCAODC_27755 0.35 -0.6 2,296,623 - proY MCAODC_27755 0.35 -0.2 2,296,658 + proY MCAODC_27755 0.37 +0.9 2,296,679 + proY MCAODC_27755 0.39 -1.6 2,296,679 + proY MCAODC_27755 0.39 -0.1 2,296,688 + proY MCAODC_27755 0.40 -1.6 2,296,744 + proY MCAODC_27755 0.44 -1.1 2,296,745 - proY MCAODC_27755 0.44 -0.7 2,296,748 + proY MCAODC_27755 0.44 -2.0 2,296,749 - proY MCAODC_27755 0.44 +0.2 2,296,754 + proY MCAODC_27755 0.44 +1.2 2,296,754 + proY MCAODC_27755 0.44 -0.4 2,296,754 + proY MCAODC_27755 0.44 +0.0 2,296,755 - proY MCAODC_27755 0.45 +0.3 2,296,755 - proY MCAODC_27755 0.45 +1.1 2,296,755 - proY MCAODC_27755 0.45 +0.3 2,296,755 - proY MCAODC_27755 0.45 +0.1 2,296,755 - proY MCAODC_27755 0.45 -1.6 2,296,755 - proY MCAODC_27755 0.45 +0.2 2,296,755 - proY MCAODC_27755 0.45 -0.5 2,296,755 - proY MCAODC_27755 0.45 +0.8 2,296,755 - proY MCAODC_27755 0.45 +0.3 2,296,777 + proY MCAODC_27755 0.46 -0.3 2,296,777 + proY MCAODC_27755 0.46 +0.7 2,296,777 + proY MCAODC_27755 0.46 +0.0 2,296,778 - proY MCAODC_27755 0.46 +0.1 2,296,809 - proY MCAODC_27755 0.48 +0.6 2,296,857 - proY MCAODC_27755 0.52 -1.5 2,296,912 - proY MCAODC_27755 0.56 +1.6 2,296,912 - proY MCAODC_27755 0.56 +1.1 2,296,912 - proY MCAODC_27755 0.56 -0.3 2,296,961 + proY MCAODC_27755 0.60 +0.8
Or see this region's nucleotide sequence