Strain Fitness in Escherichia coli ECRC101 around MCAODC_26830

Experiment: WM_TP9

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntentF and ybdZ overlap by 4 nucleotidesybdZ and fes are separated by 2 nucleotides MCAODC_26825: entF - enterobactin synthase multienzyme complex component, ATP-dependent, at 2,081,099 to 2,084,980 entF MCAODC_26830: ybdZ - Enterobactin biosynthesis protein YbdZ, at 2,084,977 to 2,085,195 ybdZ MCAODC_26835: fes - enterobactin/ferric enterobactin esterase, at 2,085,198 to 2,086,400 fes Position (kb) 2084 2085 2086Strain fitness (log2 ratio) -3 -2 -1 0 1at 2084.004 kb on + strand, within entFat 2084.005 kb on - strand, within entFat 2084.162 kb on - strand, within entFat 2084.162 kb on - strand, within entFat 2084.176 kb on - strand, within entFat 2084.176 kb on - strand, within entFat 2084.176 kb on - strand, within entFat 2084.307 kb on - strand, within entFat 2084.307 kb on - strand, within entFat 2084.336 kb on + strand, within entFat 2084.450 kb on + strand, within entFat 2084.451 kb on - strand, within entFat 2084.584 kb on - strand, within entFat 2084.681 kb on + strandat 2084.748 kb on - strandat 2084.812 kb on + strandat 2084.876 kb on + strandat 2084.886 kb on + strandat 2084.886 kb on + strandat 2084.887 kb on - strandat 2084.887 kb on - strandat 2084.966 kb on + strandat 2084.967 kb on - strandat 2084.967 kb on - strandat 2085.021 kb on + strand, within ybdZat 2085.183 kb on + strandat 2085.196 kb on - strandat 2085.196 kb on - strandat 2085.317 kb on + strandat 2085.324 kb on + strand, within fesat 2085.325 kb on - strand, within fesat 2085.334 kb on + strand, within fesat 2085.334 kb on + strand, within fesat 2085.427 kb on - strand, within fesat 2085.439 kb on - strand, within fesat 2085.478 kb on + strand, within fesat 2085.495 kb on + strand, within fesat 2085.495 kb on + strand, within fesat 2085.495 kb on + strand, within fesat 2085.495 kb on + strand, within fesat 2085.608 kb on + strand, within fesat 2085.608 kb on + strand, within fesat 2085.609 kb on - strand, within fesat 2085.627 kb on + strand, within fesat 2085.628 kb on - strand, within fesat 2085.662 kb on + strand, within fesat 2085.716 kb on - strand, within fesat 2085.716 kb on - strand, within fesat 2085.776 kb on + strand, within fesat 2085.776 kb on + strand, within fesat 2086.044 kb on + strand, within fesat 2086.045 kb on - strand, within fesat 2086.065 kb on + strand, within fesat 2086.065 kb on + strand, within fesat 2086.066 kb on - strand, within fesat 2086.121 kb on + strand, within fesat 2086.121 kb on + strand, within fesat 2086.122 kb on - strand, within fesat 2086.122 kb on - strand, within fesat 2086.129 kb on + strand, within fesat 2086.130 kb on - strand, within fes

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_TP9
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2,084,004 + entF MCAODC_26825 0.75 +1.3
2,084,005 - entF MCAODC_26825 0.75 -2.6
2,084,162 - entF MCAODC_26825 0.79 -0.5
2,084,162 - entF MCAODC_26825 0.79 -0.6
2,084,176 - entF MCAODC_26825 0.79 +1.1
2,084,176 - entF MCAODC_26825 0.79 -0.2
2,084,176 - entF MCAODC_26825 0.79 -1.1
2,084,307 - entF MCAODC_26825 0.83 +0.5
2,084,307 - entF MCAODC_26825 0.83 +0.8
2,084,336 + entF MCAODC_26825 0.83 -0.1
2,084,450 + entF MCAODC_26825 0.86 -1.8
2,084,451 - entF MCAODC_26825 0.86 -0.7
2,084,584 - entF MCAODC_26825 0.90 -0.3
2,084,681 + -0.5
2,084,748 - -1.1
2,084,812 + +0.5
2,084,876 + +1.2
2,084,886 + -1.2
2,084,886 + -0.6
2,084,887 - -1.4
2,084,887 - -0.2
2,084,966 + +0.6
2,084,967 - +0.1
2,084,967 - +0.7
2,085,021 + ybdZ MCAODC_26830 0.20 +1.0
2,085,183 + +0.3
2,085,196 - -0.7
2,085,196 - -0.6
2,085,317 + -1.8
2,085,324 + fes MCAODC_26835 0.10 -2.0
2,085,325 - fes MCAODC_26835 0.11 -1.0
2,085,334 + fes MCAODC_26835 0.11 -2.8
2,085,334 + fes MCAODC_26835 0.11 +0.4
2,085,427 - fes MCAODC_26835 0.19 -2.3
2,085,439 - fes MCAODC_26835 0.20 -0.1
2,085,478 + fes MCAODC_26835 0.23 -1.7
2,085,495 + fes MCAODC_26835 0.25 +0.4
2,085,495 + fes MCAODC_26835 0.25 -3.3
2,085,495 + fes MCAODC_26835 0.25 -0.7
2,085,495 + fes MCAODC_26835 0.25 -0.6
2,085,608 + fes MCAODC_26835 0.34 -2.1
2,085,608 + fes MCAODC_26835 0.34 +0.1
2,085,609 - fes MCAODC_26835 0.34 -0.3
2,085,627 + fes MCAODC_26835 0.36 +0.4
2,085,628 - fes MCAODC_26835 0.36 -1.2
2,085,662 + fes MCAODC_26835 0.39 -1.6
2,085,716 - fes MCAODC_26835 0.43 -2.7
2,085,716 - fes MCAODC_26835 0.43 -0.9
2,085,776 + fes MCAODC_26835 0.48 -0.3
2,085,776 + fes MCAODC_26835 0.48 -1.2
2,086,044 + fes MCAODC_26835 0.70 -1.4
2,086,045 - fes MCAODC_26835 0.70 -3.7
2,086,065 + fes MCAODC_26835 0.72 +0.4
2,086,065 + fes MCAODC_26835 0.72 -0.3
2,086,066 - fes MCAODC_26835 0.72 +0.7
2,086,121 + fes MCAODC_26835 0.77 +0.8
2,086,121 + fes MCAODC_26835 0.77 -1.9
2,086,122 - fes MCAODC_26835 0.77 -1.3
2,086,122 - fes MCAODC_26835 0.77 -0.7
2,086,129 + fes MCAODC_26835 0.77 +0.9
2,086,130 - fes MCAODC_26835 0.77 -0.0

Or see this region's nucleotide sequence