Experiment: WM_TP9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt entF and ybdZ overlap by 4 nucleotides ybdZ and fes are separated by 2 nucleotides
MCAODC_26825: entF - enterobactin synthase multienzyme complex component, ATP-dependent, at 2,081,099 to 2,084,980
entF
MCAODC_26830: ybdZ - Enterobactin biosynthesis protein YbdZ, at 2,084,977 to 2,085,195
ybdZ
MCAODC_26835: fes - enterobactin/ferric enterobactin esterase, at 2,085,198 to 2,086,400
fes
Position (kb)
2084
2085
2086 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2084.004 kb on + strand, within entF at 2084.005 kb on - strand, within entF at 2084.162 kb on - strand, within entF at 2084.162 kb on - strand, within entF at 2084.176 kb on - strand, within entF at 2084.176 kb on - strand, within entF at 2084.176 kb on - strand, within entF at 2084.307 kb on - strand, within entF at 2084.307 kb on - strand, within entF at 2084.336 kb on + strand, within entF at 2084.450 kb on + strand, within entF at 2084.451 kb on - strand, within entF at 2084.584 kb on - strand, within entF at 2084.681 kb on + strand at 2084.748 kb on - strand at 2084.812 kb on + strand at 2084.876 kb on + strand at 2084.886 kb on + strand at 2084.886 kb on + strand at 2084.887 kb on - strand at 2084.887 kb on - strand at 2084.966 kb on + strand at 2084.967 kb on - strand at 2084.967 kb on - strand at 2085.021 kb on + strand, within ybdZ at 2085.183 kb on + strand at 2085.196 kb on - strand at 2085.196 kb on - strand at 2085.317 kb on + strand at 2085.324 kb on + strand, within fes at 2085.325 kb on - strand, within fes at 2085.334 kb on + strand, within fes at 2085.334 kb on + strand, within fes at 2085.427 kb on - strand, within fes at 2085.439 kb on - strand, within fes at 2085.478 kb on + strand, within fes at 2085.495 kb on + strand, within fes at 2085.495 kb on + strand, within fes at 2085.495 kb on + strand, within fes at 2085.495 kb on + strand, within fes at 2085.608 kb on + strand, within fes at 2085.608 kb on + strand, within fes at 2085.609 kb on - strand, within fes at 2085.627 kb on + strand, within fes at 2085.628 kb on - strand, within fes at 2085.662 kb on + strand, within fes at 2085.716 kb on - strand, within fes at 2085.716 kb on - strand, within fes at 2085.776 kb on + strand, within fes at 2085.776 kb on + strand, within fes at 2086.044 kb on + strand, within fes at 2086.045 kb on - strand, within fes at 2086.065 kb on + strand, within fes at 2086.065 kb on + strand, within fes at 2086.066 kb on - strand, within fes at 2086.121 kb on + strand, within fes at 2086.121 kb on + strand, within fes at 2086.122 kb on - strand, within fes at 2086.122 kb on - strand, within fes at 2086.129 kb on + strand, within fes at 2086.130 kb on - strand, within fes
Per-strain Table
Position Strand Gene LocusTag Fraction WM_TP9 remove 2,084,004 + entF MCAODC_26825 0.75 +1.3 2,084,005 - entF MCAODC_26825 0.75 -2.6 2,084,162 - entF MCAODC_26825 0.79 -0.5 2,084,162 - entF MCAODC_26825 0.79 -0.6 2,084,176 - entF MCAODC_26825 0.79 +1.1 2,084,176 - entF MCAODC_26825 0.79 -0.2 2,084,176 - entF MCAODC_26825 0.79 -1.1 2,084,307 - entF MCAODC_26825 0.83 +0.5 2,084,307 - entF MCAODC_26825 0.83 +0.8 2,084,336 + entF MCAODC_26825 0.83 -0.1 2,084,450 + entF MCAODC_26825 0.86 -1.8 2,084,451 - entF MCAODC_26825 0.86 -0.7 2,084,584 - entF MCAODC_26825 0.90 -0.3 2,084,681 + -0.5 2,084,748 - -1.1 2,084,812 + +0.5 2,084,876 + +1.2 2,084,886 + -1.2 2,084,886 + -0.6 2,084,887 - -1.4 2,084,887 - -0.2 2,084,966 + +0.6 2,084,967 - +0.1 2,084,967 - +0.7 2,085,021 + ybdZ MCAODC_26830 0.20 +1.0 2,085,183 + +0.3 2,085,196 - -0.7 2,085,196 - -0.6 2,085,317 + -1.8 2,085,324 + fes MCAODC_26835 0.10 -2.0 2,085,325 - fes MCAODC_26835 0.11 -1.0 2,085,334 + fes MCAODC_26835 0.11 -2.8 2,085,334 + fes MCAODC_26835 0.11 +0.4 2,085,427 - fes MCAODC_26835 0.19 -2.3 2,085,439 - fes MCAODC_26835 0.20 -0.1 2,085,478 + fes MCAODC_26835 0.23 -1.7 2,085,495 + fes MCAODC_26835 0.25 +0.4 2,085,495 + fes MCAODC_26835 0.25 -3.3 2,085,495 + fes MCAODC_26835 0.25 -0.7 2,085,495 + fes MCAODC_26835 0.25 -0.6 2,085,608 + fes MCAODC_26835 0.34 -2.1 2,085,608 + fes MCAODC_26835 0.34 +0.1 2,085,609 - fes MCAODC_26835 0.34 -0.3 2,085,627 + fes MCAODC_26835 0.36 +0.4 2,085,628 - fes MCAODC_26835 0.36 -1.2 2,085,662 + fes MCAODC_26835 0.39 -1.6 2,085,716 - fes MCAODC_26835 0.43 -2.7 2,085,716 - fes MCAODC_26835 0.43 -0.9 2,085,776 + fes MCAODC_26835 0.48 -0.3 2,085,776 + fes MCAODC_26835 0.48 -1.2 2,086,044 + fes MCAODC_26835 0.70 -1.4 2,086,045 - fes MCAODC_26835 0.70 -3.7 2,086,065 + fes MCAODC_26835 0.72 +0.4 2,086,065 + fes MCAODC_26835 0.72 -0.3 2,086,066 - fes MCAODC_26835 0.72 +0.7 2,086,121 + fes MCAODC_26835 0.77 +0.8 2,086,121 + fes MCAODC_26835 0.77 -1.9 2,086,122 - fes MCAODC_26835 0.77 -1.3 2,086,122 - fes MCAODC_26835 0.77 -0.7 2,086,129 + fes MCAODC_26835 0.77 +0.9 2,086,130 - fes MCAODC_26835 0.77 -0.0
Or see this region's nucleotide sequence