Strain Fitness in Escherichia coli ECRC101 around MCAODC_11015

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
2,194,582	-	surE	MCAODC_11005	0.76	-0.7
2,194,582	-	surE	MCAODC_11005	0.76	+0.6
2,194,588	+	surE	MCAODC_11005	0.77	+0.4
2,194,649	+	surE	MCAODC_11005	0.85	-0.3
2,194,650	-	surE	MCAODC_11005	0.85	-0.3
2,194,660	+	surE	MCAODC_11005	0.87	+0.5
2,194,660	+	surE	MCAODC_11005	0.87	-3.2
2,194,660	+	surE	MCAODC_11005	0.87	-1.7
2,194,660	+	surE	MCAODC_11005	0.87	+0.0
2,194,661	-	surE	MCAODC_11005	0.87	-0.9
2,194,661	-	surE	MCAODC_11005	0.87	-0.4
2,194,661	-	surE	MCAODC_11005	0.87	-1.3
2,194,661	-	surE	MCAODC_11005	0.87	+0.2
2,194,661	-	surE	MCAODC_11005	0.87	-0.6
2,194,661	-	surE	MCAODC_11005	0.87	-0.7
2,194,661	-	surE	MCAODC_11005	0.87	+0.5
2,194,759	+				+1.3
2,194,760	-				-1.2
2,194,792	+				+0.6
2,194,793	-				+0.1
2,194,806	-				-0.1
2,194,909	+	pcm	MCAODC_11010	0.25	-0.3
2,194,938	+	pcm	MCAODC_11010	0.29	+0.5
2,194,938	+	pcm	MCAODC_11010	0.29	+0.2
2,194,938	+	pcm	MCAODC_11010	0.29	-0.3
2,194,938	+	pcm	MCAODC_11010	0.29	+0.5
2,194,938	+	pcm	MCAODC_11010	0.29	-1.4
2,194,938	+	pcm	MCAODC_11010	0.29	+0.8
2,194,939	-	pcm	MCAODC_11010	0.29	-0.0
2,194,939	-	pcm	MCAODC_11010	0.29	+1.1
2,194,939	-	pcm	MCAODC_11010	0.29	+0.7
2,194,939	-	pcm	MCAODC_11010	0.29	-1.3
2,194,939	-	pcm	MCAODC_11010	0.29	-1.7
2,194,939	-	pcm	MCAODC_11010	0.29	-0.7
2,194,940	+	pcm	MCAODC_11010	0.30	-0.9
2,194,940	+	pcm	MCAODC_11010	0.30	+1.3
2,194,940	+	pcm	MCAODC_11010	0.30	-0.8
2,194,941	-	pcm	MCAODC_11010	0.30	+1.8
2,194,941	-	pcm	MCAODC_11010	0.30	-0.2
2,195,119	+	pcm	MCAODC_11010	0.58	+1.2
2,195,120	-	pcm	MCAODC_11010	0.58	-0.2
2,195,123	+	pcm	MCAODC_11010	0.59	-0.1
2,195,123	+	pcm	MCAODC_11010	0.59	+0.0
2,195,123	+	pcm	MCAODC_11010	0.59	-0.6
2,195,196	-	pcm	MCAODC_11010	0.70	-0.1
2,195,263	+	pcm	MCAODC_11010	0.81	+0.1
2,195,286	+	pcm	MCAODC_11010	0.85	-0.2
2,195,286	+	pcm	MCAODC_11010	0.85	-1.3
2,195,380	-				+1.5
2,195,461	+				+0.4
2,195,483	-				-1.0
2,195,483	-				+0.8
2,195,658	+	nlpD	MCAODC_11015	0.13	+0.3
2,195,658	+	nlpD	MCAODC_11015	0.13	-0.1
2,195,659	-	nlpD	MCAODC_11015	0.13	+0.8
2,195,670	+	nlpD	MCAODC_11015	0.14	+1.3
2,195,671	-	nlpD	MCAODC_11015	0.14	+1.4
2,195,709	+	nlpD	MCAODC_11015	0.17	+0.3
2,195,710	-	nlpD	MCAODC_11015	0.17	+0.3
2,195,748	-	nlpD	MCAODC_11015	0.21	-0.6
2,195,788	+	nlpD	MCAODC_11015	0.24	+2.3
2,195,789	-	nlpD	MCAODC_11015	0.25	-0.1
2,195,789	-	nlpD	MCAODC_11015	0.25	-0.1
2,195,791	-	nlpD	MCAODC_11015	0.25	-2.1
2,195,791	-	nlpD	MCAODC_11015	0.25	-0.5
2,195,800	+	nlpD	MCAODC_11015	0.26	-2.5
2,195,824	+	nlpD	MCAODC_11015	0.28	+0.8
2,195,824	+	nlpD	MCAODC_11015	0.28	+0.7
2,195,827	-	nlpD	MCAODC_11015	0.28	-0.3
2,195,836	-	nlpD	MCAODC_11015	0.29	-1.4
2,195,836	-	nlpD	MCAODC_11015	0.29	-2.8
2,195,836	-	nlpD	MCAODC_11015	0.29	+0.3
2,195,839	+	nlpD	MCAODC_11015	0.29	+0.7
2,195,839	+	nlpD	MCAODC_11015	0.29	+0.9
2,195,839	+	nlpD	MCAODC_11015	0.29	-0.4
2,195,840	-	nlpD	MCAODC_11015	0.29	-0.2
2,195,840	-	nlpD	MCAODC_11015	0.29	-2.8
2,195,840	-	nlpD	MCAODC_11015	0.29	+1.0
2,195,841	+	nlpD	MCAODC_11015	0.29	-1.2
2,195,842	-	nlpD	MCAODC_11015	0.29	+0.3
2,195,869	+	nlpD	MCAODC_11015	0.32	+0.4
2,195,870	-	nlpD	MCAODC_11015	0.32	-0.4
2,195,870	-	nlpD	MCAODC_11015	0.32	+1.5
2,195,870	-	nlpD	MCAODC_11015	0.32	+1.1
2,195,922	+	nlpD	MCAODC_11015	0.37	-0.0
2,195,922	+	nlpD	MCAODC_11015	0.37	-1.4
2,195,935	+	nlpD	MCAODC_11015	0.38	-0.3
2,195,936	-	nlpD	MCAODC_11015	0.38	-1.5
2,195,961	-	nlpD	MCAODC_11015	0.40	+0.1
2,196,094	-	nlpD	MCAODC_11015	0.52	+1.5
2,196,094	-	nlpD	MCAODC_11015	0.52	+1.5
2,196,094	-	nlpD	MCAODC_11015	0.52	+1.9
2,196,094	-	nlpD	MCAODC_11015	0.52	+1.7
2,196,098	-	nlpD	MCAODC_11015	0.53	+2.3
2,196,222	+	nlpD	MCAODC_11015	0.64	+0.0
2,196,222	+	nlpD	MCAODC_11015	0.64	+0.4
2,196,235	-	nlpD	MCAODC_11015	0.65	+2.8
2,196,348	+	nlpD	MCAODC_11015	0.76	+1.2
2,196,349	-	nlpD	MCAODC_11015	0.76	+2.0
2,196,376	+	nlpD	MCAODC_11015	0.78	+0.2
2,196,377	-	nlpD	MCAODC_11015	0.78	+2.9
2,196,406	-	nlpD	MCAODC_11015	0.81	+1.9
2,196,414	+	nlpD	MCAODC_11015	0.82	-0.4
2,196,415	-	nlpD	MCAODC_11015	0.82	+2.6
2,196,415	-	nlpD	MCAODC_11015	0.82	+1.4
2,196,426	+	nlpD	MCAODC_11015	0.83	+0.6
2,196,426	+	nlpD	MCAODC_11015	0.83	+0.7
2,196,426	+	nlpD	MCAODC_11015	0.83	+1.0
2,196,427	-	nlpD	MCAODC_11015	0.83	+1.6
2,196,427	-	nlpD	MCAODC_11015	0.83	+1.7
2,196,437	-	nlpD	MCAODC_11015	0.84	+2.2
2,196,509	+				+1.3
2,196,522	+				+1.2
2,196,565	+				+1.7
2,196,595	+				+1.6
2,196,596	-				+1.6
2,196,674	+				+2.2
2,196,674	+				+2.4
2,196,675	-				+2.1
2,196,686	+				+2.0
2,196,687	-				+1.9
2,196,706	+				+2.5
2,196,707	-				+2.6
2,196,763	+				+2.2
2,196,763	+				+2.7
2,196,766	+				+1.5
2,196,767	-				+2.9
2,196,855	+	rpoS	MCAODC_11020	0.18	+1.8
2,196,855	+	rpoS	MCAODC_11020	0.18	+2.5
2,196,855	+	rpoS	MCAODC_11020	0.18	+1.9
2,196,907	-	rpoS	MCAODC_11020	0.23	+2.2
2,196,965	+	rpoS	MCAODC_11020	0.29	+1.9
2,196,965	+	rpoS	MCAODC_11020	0.29	+2.9
2,196,982	+	rpoS	MCAODC_11020	0.31	+1.2
2,197,107	+	rpoS	MCAODC_11020	0.44	+2.1
2,197,107	+	rpoS	MCAODC_11020	0.44	+1.8
2,197,107	+	rpoS	MCAODC_11020	0.44	+2.1
2,197,107	+	rpoS	MCAODC_11020	0.44	+3.2
2,197,107	+	rpoS	MCAODC_11020	0.44	+2.0
2,197,107	+	rpoS	MCAODC_11020	0.44	+2.2
2,197,108	-	rpoS	MCAODC_11020	0.44	+2.7
2,197,108	-	rpoS	MCAODC_11020	0.44	+0.7
2,197,108	-	rpoS	MCAODC_11020	0.44	+1.9
2,197,108	-	rpoS	MCAODC_11020	0.44	+2.8
2,197,149	-	rpoS	MCAODC_11020	0.48	+2.0
2,197,164	-	rpoS	MCAODC_11020	0.49	+1.5
2,197,166	+	rpoS	MCAODC_11020	0.49	+2.2
2,197,166	+	rpoS	MCAODC_11020	0.49	+2.1
2,197,167	-	rpoS	MCAODC_11020	0.50	+2.9
2,197,189	+	rpoS	MCAODC_11020	0.52	+2.8
2,197,236	-	rpoS	MCAODC_11020	0.56	+2.9
2,197,331	+	rpoS	MCAODC_11020	0.66	+1.6
2,197,331	+	rpoS	MCAODC_11020	0.66	+2.8
2,197,332	-	rpoS	MCAODC_11020	0.66	+1.6
2,197,418	+	rpoS	MCAODC_11020	0.75	+0.7
2,197,436	+	rpoS	MCAODC_11020	0.77	+1.7
2,197,436	+	rpoS	MCAODC_11020	0.77	+2.1
2,197,436	+	rpoS	MCAODC_11020	0.77	+2.2
2,197,437	-	rpoS	MCAODC_11020	0.77	+0.7
2,197,437	-	rpoS	MCAODC_11020	0.77	+2.3
2,197,437	-	rpoS	MCAODC_11020	0.77	+1.8
2,197,493	-	rpoS	MCAODC_11020	0.82	+2.7
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.3
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.1
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.1
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.1
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.2
2,197,546	+	rpoS	MCAODC_11020	0.88	+2.1
2,197,546	+	rpoS	MCAODC_11020	0.88	+1.8
2,197,547	-	rpoS	MCAODC_11020	0.88	+2.5