Strain Fitness in Escherichia coli ECRC101 around MCAODC_10800

Experiment: WM_TP9

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpyrG and eno are separated by 87 nucleotideseno and ygcG are separated by 59 nucleotidesygcG and ygcG overlap by 4 nucleotides MCAODC_10795: pyrG - CTP synthase (glutamine hydrolyzing), at 2,152,732 to 2,154,369 pyrG MCAODC_10800: eno - phosphopyruvate hydratase, at 2,154,457 to 2,155,755 eno MCAODC_10805: ygcG - TPM-phosphatase domain-containing protein, at 2,155,815 to 2,156,729 ygcG MCAODC_10810: ygcG - TPM-phosphatase domain-containing protein, at 2,156,726 to 2,157,874 ygcG Position (kb) 2154 2155 2156Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2154.367 kb on + strandat 2154.371 kb on + strandat 2154.371 kb on + strandat 2154.432 kb on + strandat 2155.732 kb on - strandat 2155.753 kb on + strandat 2155.753 kb on + strandat 2155.754 kb on - strandat 2155.805 kb on + strandat 2155.941 kb on - strand, within ygcGat 2155.941 kb on - strand, within ygcGat 2156.089 kb on - strand, within ygcGat 2156.098 kb on + strand, within ygcGat 2156.099 kb on - strand, within ygcGat 2156.178 kb on + strand, within ygcGat 2156.179 kb on - strand, within ygcGat 2156.181 kb on - strand, within ygcGat 2156.185 kb on - strand, within ygcGat 2156.216 kb on + strand, within ygcGat 2156.221 kb on + strand, within ygcGat 2156.221 kb on + strand, within ygcGat 2156.222 kb on - strand, within ygcGat 2156.292 kb on + strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.335 kb on - strand, within ygcGat 2156.336 kb on + strand, within ygcGat 2156.437 kb on - strand, within ygcGat 2156.442 kb on - strand, within ygcGat 2156.459 kb on + strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.460 kb on - strand, within ygcGat 2156.493 kb on - strand, within ygcGat 2156.493 kb on - strand, within ygcGat 2156.535 kb on + strand, within ygcGat 2156.535 kb on + strand, within ygcGat 2156.536 kb on - strand, within ygcGat 2156.538 kb on + strand, within ygcGat 2156.538 kb on + strand, within ygcGat 2156.561 kb on + strand, within ygcGat 2156.562 kb on - strand, within ygcGat 2156.567 kb on + strand, within ygcGat 2156.568 kb on - strand, within ygcGat 2156.700 kb on + strandat 2156.705 kb on + strandat 2156.713 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_TP9
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2,154,367 + +0.8
2,154,371 + +1.5
2,154,371 + +0.8
2,154,432 + +1.0
2,155,732 - -0.3
2,155,753 + -1.1
2,155,753 + -3.3
2,155,754 - +1.4
2,155,805 + -0.6
2,155,941 - ygcG MCAODC_10805 0.14 -0.1
2,155,941 - ygcG MCAODC_10805 0.14 +0.6
2,156,089 - ygcG MCAODC_10805 0.30 -0.2
2,156,098 + ygcG MCAODC_10805 0.31 +1.0
2,156,099 - ygcG MCAODC_10805 0.31 +0.1
2,156,178 + ygcG MCAODC_10805 0.40 -0.6
2,156,179 - ygcG MCAODC_10805 0.40 -0.0
2,156,181 - ygcG MCAODC_10805 0.40 -0.6
2,156,185 - ygcG MCAODC_10805 0.40 +0.6
2,156,216 + ygcG MCAODC_10805 0.44 -1.1
2,156,221 + ygcG MCAODC_10805 0.44 -0.1
2,156,221 + ygcG MCAODC_10805 0.44 -1.9
2,156,222 - ygcG MCAODC_10805 0.44 -0.7
2,156,292 + ygcG MCAODC_10805 0.52 +0.9
2,156,335 - ygcG MCAODC_10805 0.57 +0.4
2,156,335 - ygcG MCAODC_10805 0.57 -0.5
2,156,335 - ygcG MCAODC_10805 0.57 -0.2
2,156,336 + ygcG MCAODC_10805 0.57 -0.4
2,156,437 - ygcG MCAODC_10805 0.68 +0.6
2,156,442 - ygcG MCAODC_10805 0.69 +0.4
2,156,459 + ygcG MCAODC_10805 0.70 -0.1
2,156,460 - ygcG MCAODC_10805 0.70 -0.4
2,156,460 - ygcG MCAODC_10805 0.70 +0.5
2,156,460 - ygcG MCAODC_10805 0.70 -0.0
2,156,493 - ygcG MCAODC_10805 0.74 +0.0
2,156,493 - ygcG MCAODC_10805 0.74 -0.3
2,156,535 + ygcG MCAODC_10805 0.79 +2.1
2,156,535 + ygcG MCAODC_10805 0.79 +0.1
2,156,536 - ygcG MCAODC_10805 0.79 -0.3
2,156,538 + ygcG MCAODC_10805 0.79 +2.3
2,156,538 + ygcG MCAODC_10805 0.79 -2.2
2,156,561 + ygcG MCAODC_10805 0.82 -0.0
2,156,562 - ygcG MCAODC_10805 0.82 -1.0
2,156,567 + ygcG MCAODC_10805 0.82 -0.4
2,156,568 - ygcG MCAODC_10805 0.82 +0.2
2,156,700 + -0.8
2,156,705 + +1.7
2,156,713 - -1.5

Or see this region's nucleotide sequence