Strain Fitness in Escherichia coli ECRC101 around MCAODC_08280

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
1,659,560	+	tldD	MCAODC_08275	0.43	+0.4
1,659,561	-	tldD	MCAODC_08275	0.43	+0.7
1,659,624	+	tldD	MCAODC_08275	0.48	+0.2
1,659,624	+	tldD	MCAODC_08275	0.48	+0.9
1,659,625	-	tldD	MCAODC_08275	0.48	+0.6
1,659,625	-	tldD	MCAODC_08275	0.48	-1.4
1,659,625	-	tldD	MCAODC_08275	0.48	-0.5
1,659,625	-	tldD	MCAODC_08275	0.48	-1.0
1,659,625	-	tldD	MCAODC_08275	0.48	+0.7
1,659,629	-	tldD	MCAODC_08275	0.48	+0.8
1,659,684	+	tldD	MCAODC_08275	0.52	+0.9
1,659,684	+	tldD	MCAODC_08275	0.52	+0.3
1,659,684	+	tldD	MCAODC_08275	0.52	+1.4
1,659,685	-	tldD	MCAODC_08275	0.52	+0.3
1,659,727	-	tldD	MCAODC_08275	0.55	+0.6
1,659,772	-	tldD	MCAODC_08275	0.58	-0.6
1,659,772	-	tldD	MCAODC_08275	0.58	+0.4
1,659,775	+	tldD	MCAODC_08275	0.58	+2.5
1,659,814	+	tldD	MCAODC_08275	0.61	-0.2
1,659,832	+	tldD	MCAODC_08275	0.62	+0.1
1,659,927	-	tldD	MCAODC_08275	0.69	+0.4
1,659,995	+	tldD	MCAODC_08275	0.73	+0.1
1,659,996	-	tldD	MCAODC_08275	0.74	+0.4
1,660,031	+	tldD	MCAODC_08275	0.76	-0.8
1,660,031	+	tldD	MCAODC_08275	0.76	+0.7
1,660,031	+	tldD	MCAODC_08275	0.76	+1.3
1,660,031	+	tldD	MCAODC_08275	0.76	-0.2
1,660,031	+	tldD	MCAODC_08275	0.76	-0.6
1,660,031	+	tldD	MCAODC_08275	0.76	-0.6
1,660,031	+	tldD	MCAODC_08275	0.76	-0.5
1,660,031	+	tldD	MCAODC_08275	0.76	+0.0
1,660,031	+	tldD	MCAODC_08275	0.76	-0.6
1,660,031	+	tldD	MCAODC_08275	0.76	-0.6
1,660,031	+	tldD	MCAODC_08275	0.76	+0.7
1,660,032	-	tldD	MCAODC_08275	0.76	+0.2
1,660,032	-	tldD	MCAODC_08275	0.76	+0.3
1,660,032	-	tldD	MCAODC_08275	0.76	-0.0
1,660,032	-	tldD	MCAODC_08275	0.76	-2.3
1,660,032	-	tldD	MCAODC_08275	0.76	-0.1
1,660,032	-	tldD	MCAODC_08275	0.76	+0.7
1,660,033	+	tldD	MCAODC_08275	0.76	-0.4
1,660,033	+	tldD	MCAODC_08275	0.76	-0.2
1,660,033	+	tldD	MCAODC_08275	0.76	-0.5
1,660,034	-	tldD	MCAODC_08275	0.76	+0.3
1,660,034	-	tldD	MCAODC_08275	0.76	-0.6
1,660,034	-	tldD	MCAODC_08275	0.76	+0.3
1,660,034	-	tldD	MCAODC_08275	0.76	+0.2
1,660,087	+	tldD	MCAODC_08275	0.80	-0.1
1,660,088	-	tldD	MCAODC_08275	0.80	-2.6
1,660,088	-	tldD	MCAODC_08275	0.80	-0.8
1,660,091	+	tldD	MCAODC_08275	0.80	+0.4
1,660,091	+	tldD	MCAODC_08275	0.80	+0.8
1,660,091	+	tldD	MCAODC_08275	0.80	-1.8
1,660,091	+	tldD	MCAODC_08275	0.80	-0.1
1,660,091	+	tldD	MCAODC_08275	0.80	+1.0
1,660,092	-	tldD	MCAODC_08275	0.80	+0.6
1,660,092	-	tldD	MCAODC_08275	0.80	+0.6
1,660,092	-	tldD	MCAODC_08275	0.80	-1.8
1,660,092	-	tldD	MCAODC_08275	0.80	-0.0
1,660,092	-	tldD	MCAODC_08275	0.80	-0.9
1,660,092	-	tldD	MCAODC_08275	0.80	+0.3
1,660,164	-	tldD	MCAODC_08275	0.85	-2.0
1,660,164	-	tldD	MCAODC_08275	0.85	-3.2
1,660,164	-	tldD	MCAODC_08275	0.85	-1.9
1,660,186	-	tldD	MCAODC_08275	0.87	-0.9
1,660,186	-	tldD	MCAODC_08275	0.87	+0.7
1,660,186	-	tldD	MCAODC_08275	0.87	+0.9
1,660,377	-				-0.1
1,660,407	-				+0.1
1,660,457	-				+0.4
1,660,457	-				+0.5
1,660,489	-				+0.1
1,660,489	-				-1.3
1,660,495	+				+2.6
1,660,495	+				+1.0
1,660,495	+				-0.7
1,660,495	+				-1.2
1,660,496	-				+0.0
1,660,501	+				+1.8
1,660,501	+				-2.4
1,660,502	-				+0.0
1,660,502	-				+0.3
1,660,502	-				-1.1
1,660,507	-				+0.4
1,660,507	-				+0.7
1,660,507	-				+0.4
1,660,513	+				+0.3
1,660,513	+				+0.4
1,660,514	-				-1.9
1,660,514	-				-1.0
1,660,553	+				-0.1
1,660,554	-				+0.5
1,660,570	+				+1.1
1,660,599	+				+1.2
1,660,600	-				-0.1
1,660,600	-				-0.4
1,660,630	+	aaeR	MCAODC_08280	0.13	+0.5
1,660,630	+	aaeR	MCAODC_08280	0.13	-0.5
1,660,631	-	aaeR	MCAODC_08280	0.13	-0.2
1,660,631	-	aaeR	MCAODC_08280	0.13	+0.5
1,660,631	-	aaeR	MCAODC_08280	0.13	-3.1
1,660,631	-	aaeR	MCAODC_08280	0.13	-1.0
1,660,632	+	aaeR	MCAODC_08280	0.13	+0.8
1,660,632	+	aaeR	MCAODC_08280	0.13	-1.0
1,660,632	+	aaeR	MCAODC_08280	0.13	+0.4
1,660,632	+	aaeR	MCAODC_08280	0.13	-1.2
1,660,632	+	aaeR	MCAODC_08280	0.13	-1.3
1,660,632	+	aaeR	MCAODC_08280	0.13	-2.7
1,660,633	-	aaeR	MCAODC_08280	0.13	-0.3
1,660,633	-	aaeR	MCAODC_08280	0.13	-0.7
1,660,633	-	aaeR	MCAODC_08280	0.13	+0.0
1,660,633	-	aaeR	MCAODC_08280	0.13	+0.4
1,660,633	-	aaeR	MCAODC_08280	0.13	-0.3
1,660,729	+	aaeR	MCAODC_08280	0.23	+1.1
1,660,781	+	aaeR	MCAODC_08280	0.29	-0.4
1,660,867	+	aaeR	MCAODC_08280	0.38	-0.8
1,660,867	+	aaeR	MCAODC_08280	0.38	+0.1
1,660,886	+	aaeR	MCAODC_08280	0.40	+2.3
1,660,887	-	aaeR	MCAODC_08280	0.40	+0.0
1,660,890	+	aaeR	MCAODC_08280	0.41	-0.7
1,660,890	+	aaeR	MCAODC_08280	0.41	+0.1
1,660,891	-	aaeR	MCAODC_08280	0.41	+2.3
1,660,930	+	aaeR	MCAODC_08280	0.45	-1.1
1,660,931	-	aaeR	MCAODC_08280	0.45	+0.4
1,661,139	-	aaeR	MCAODC_08280	0.67	-0.4
1,661,139	-	aaeR	MCAODC_08280	0.67	-0.1
1,661,139	-	aaeR	MCAODC_08280	0.67	+0.3
1,661,180	+	aaeR	MCAODC_08280	0.72	+0.1
1,661,191	+	aaeR	MCAODC_08280	0.73	+0.4
1,661,191	+	aaeR	MCAODC_08280	0.73	-2.4
1,661,192	-	aaeR	MCAODC_08280	0.73	+0.4
1,661,192	-	aaeR	MCAODC_08280	0.73	+0.9
1,661,192	-	aaeR	MCAODC_08280	0.73	+1.5
1,661,228	+	aaeR	MCAODC_08280	0.77	-0.8
1,661,228	+	aaeR	MCAODC_08280	0.77	+1.3
1,661,228	+	aaeR	MCAODC_08280	0.77	-0.3
1,661,229	-	aaeR	MCAODC_08280	0.77	+1.6
1,661,229	-	aaeR	MCAODC_08280	0.77	+3.2
1,661,229	-	aaeR	MCAODC_08280	0.77	-0.3
1,661,245	+	aaeR	MCAODC_08280	0.79	+0.4
1,661,248	+	aaeR	MCAODC_08280	0.79	-0.1
1,661,295	+	aaeR	MCAODC_08280	0.84	-0.8
1,661,295	+	aaeR	MCAODC_08280	0.84	+1.2
1,661,304	+	aaeR	MCAODC_08280	0.85	-0.5
1,661,364	+				-0.4
1,661,364	+				-2.4
1,661,365	-				-0.2
1,661,365	-				-0.7
1,661,365	-				+0.1
1,661,385	-				-0.4
1,661,403	+				+0.0
1,661,403	+				-0.2
1,661,456	+				+0.6
1,661,476	+				+0.2
1,661,477	-				-0.1
1,661,480	-				+0.3
1,661,481	+				-1.2
1,661,481	+				-1.9
1,661,482	-				-0.1
1,661,486	-				+0.3
1,661,486	-				-0.4
1,661,494	-				+0.5
1,661,505	+				+0.0
1,661,505	+				-0.4
1,661,506	-				-2.1
1,661,506	-				+0.0
1,661,508	+				-0.3
1,661,508	+				-1.7
1,661,514	-				-0.3
1,661,514	-				+0.0
1,661,517	+				+0.3
1,661,517	+				+0.1
1,661,518	-				+0.7
1,661,518	-				+0.6
1,661,526	-				-0.2
1,661,606	+				-0.1
1,661,606	+				+0.3
1,661,608	+				-0.4
1,661,608	+				+0.9
1,661,608	+				-0.8
1,661,609	-				+0.4
1,661,609	-				+0.2
1,661,609	-				+0.0
1,661,609	-				-1.1
1,661,609	-				-0.5
1,661,609	-				+1.6
1,661,609	-				+0.9
1,661,609	-				+1.1
1,661,609	-				+0.1
1,661,674	-	aaeX	MCAODC_08285	0.25	+0.2
1,661,691	+	aaeX	MCAODC_08285	0.33	-0.6
1,661,740	+	aaeX	MCAODC_08285	0.57	-1.3
1,661,740	+	aaeX	MCAODC_08285	0.57	+0.1
1,661,741	-	aaeX	MCAODC_08285	0.57	+0.3
1,661,741	-	aaeX	MCAODC_08285	0.57	+0.4
1,661,741	-	aaeX	MCAODC_08285	0.57	+0.3
1,661,744	+	aaeX	MCAODC_08285	0.59	-3.0
1,661,745	-	aaeX	MCAODC_08285	0.59	+0.6
1,661,745	-	aaeX	MCAODC_08285	0.59	-0.1
1,661,786	+	aaeX	MCAODC_08285	0.79	+0.5
1,661,802	-	aaeX	MCAODC_08285	0.87	+0.4
1,661,845	+				+0.4
1,661,846	-				+0.2
1,661,846	-				-0.3
1,661,881	+				+0.2
1,661,884	+				-0.7
1,661,925	+				+0.2
1,661,925	+				-0.1
1,661,925	+				+1.4
1,661,926	-				-0.1
1,661,926	-				-0.1
1,661,926	-				+0.6
1,661,929	-	aaeA	MCAODC_08290	0.10	+0.0
1,661,929	-	aaeA	MCAODC_08290	0.10	+0.1
1,661,964	-	aaeA	MCAODC_08290	0.14	-1.2
1,662,117	+	aaeA	MCAODC_08290	0.30	-0.2
1,662,117	+	aaeA	MCAODC_08290	0.30	+1.3
1,662,118	-	aaeA	MCAODC_08290	0.30	+1.2
1,662,118	-	aaeA	MCAODC_08290	0.30	-0.4
1,662,120	+	aaeA	MCAODC_08290	0.31	+2.1
1,662,127	+	aaeA	MCAODC_08290	0.31	-1.8
1,662,220	+	aaeA	MCAODC_08290	0.41	+0.1
1,662,220	+	aaeA	MCAODC_08290	0.41	+0.2
1,662,221	-	aaeA	MCAODC_08290	0.42	+0.7
1,662,223	+	aaeA	MCAODC_08290	0.42	-0.5
1,662,223	+	aaeA	MCAODC_08290	0.42	+0.5
1,662,224	-	aaeA	MCAODC_08290	0.42	-1.3
1,662,224	-	aaeA	MCAODC_08290	0.42	+1.4
1,662,244	+	aaeA	MCAODC_08290	0.44	-0.1
1,662,244	+	aaeA	MCAODC_08290	0.44	-0.4
1,662,342	+	aaeA	MCAODC_08290	0.55	-0.2
1,662,342	+	aaeA	MCAODC_08290	0.55	-0.5
1,662,342	+	aaeA	MCAODC_08290	0.55	+0.3
1,662,343	-	aaeA	MCAODC_08290	0.55	-0.8
1,662,356	+	aaeA	MCAODC_08290	0.56	+0.7
1,662,357	-	aaeA	MCAODC_08290	0.56	+0.4
1,662,360	-	aaeA	MCAODC_08290	0.56	+0.6
1,662,405	+	aaeA	MCAODC_08290	0.61	-1.0
1,662,406	-	aaeA	MCAODC_08290	0.61	+0.1
1,662,406	-	aaeA	MCAODC_08290	0.61	+0.5
1,662,409	+	aaeA	MCAODC_08290	0.62	-1.0
1,662,409	+	aaeA	MCAODC_08290	0.62	-0.2
1,662,409	+	aaeA	MCAODC_08290	0.62	+0.6
1,662,409	+	aaeA	MCAODC_08290	0.62	+0.2
1,662,409	+	aaeA	MCAODC_08290	0.62	+0.5
1,662,410	-	aaeA	MCAODC_08290	0.62	+0.0
1,662,410	-	aaeA	MCAODC_08290	0.62	-1.1
1,662,417	+	aaeA	MCAODC_08290	0.63	+0.5
1,662,417	+	aaeA	MCAODC_08290	0.63	+0.4
1,662,417	+	aaeA	MCAODC_08290	0.63	+0.0
1,662,417	+	aaeA	MCAODC_08290	0.63	+0.6
1,662,418	-	aaeA	MCAODC_08290	0.63	+0.2
1,662,418	-	aaeA	MCAODC_08290	0.63	+0.5
1,662,418	-	aaeA	MCAODC_08290	0.63	-0.2
1,662,418	-	aaeA	MCAODC_08290	0.63	-0.6
1,662,418	-	aaeA	MCAODC_08290	0.63	+0.5
1,662,418	-	aaeA	MCAODC_08290	0.63	-0.9
1,662,418	-	aaeA	MCAODC_08290	0.63	+0.1
1,662,419	+	aaeA	MCAODC_08290	0.63	-0.9
1,662,431	+	aaeA	MCAODC_08290	0.64	-0.1
1,662,432	-	aaeA	MCAODC_08290	0.64	-1.4