Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06249 and MPMX19_06250 are separated by 191 nucleotides MPMX19_06250 and MPMX19_06251 overlap by 4 nucleotides
MPMX19_06249: MPMX19_06249 - hypothetical protein, at 1 to 930
_06249
MPMX19_06250: MPMX19_06250 - hypothetical protein, at 1,122 to 1,751
_06250
MPMX19_06251: MPMX19_06251 - hypothetical protein, at 1,748 to 2,320
_06251
Position (kb)
1
2 Strain fitness (log2 ratio)
-2
-1
0
1 at 0.939 kb on + strand at 0.939 kb on + strand at 0.939 kb on + strand at 0.939 kb on + strand at 0.939 kb on + strand at 0.939 kb on + strand at 0.983 kb on + strand at 0.983 kb on + strand at 0.984 kb on - strand at 0.984 kb on - strand at 2.394 kb on + strand at 2.395 kb on - strand at 2.460 kb on + strand at 2.460 kb on + strand at 2.460 kb on + strand at 2.460 kb on + strand at 2.461 kb on - strand at 2.461 kb on - strand at 2.563 kb on + strand at 2.666 kb on - strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.713 kb on + strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand at 2.714 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 939 + -0.3 939 + -0.7 939 + -0.8 939 + +0.3 939 + +0.4 939 + -0.3 983 + -0.2 983 + -2.5 984 - -0.5 984 - -1.9 2,394 + -0.1 2,395 - -0.5 2,460 + -1.7 2,460 + +0.1 2,460 + -0.6 2,460 + -0.9 2,461 - -1.2 2,461 - +0.1 2,563 + -1.5 2,666 - -1.2 2,713 + +0.7 2,713 + -0.5 2,713 + +0.3 2,713 + +1.1 2,713 + -0.8 2,713 + +0.1 2,713 + -0.4 2,713 + -1.2 2,714 - +1.1 2,714 - -0.5 2,714 - +1.4 2,714 - +0.1 2,714 - -1.0 2,714 - -1.2 2,714 - -0.2 2,714 - -0.2 2,714 - -0.5
Or see this region's nucleotide sequence