Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03642

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,077,333	+		MPMX19_03641	0.74	-0.8
1,077,333	+		MPMX19_03641	0.74	+0.2
1,077,333	+		MPMX19_03641	0.74	-2.3
1,077,333	+		MPMX19_03641	0.74	+0.2
1,077,333	+		MPMX19_03641	0.74	+0.8
1,077,333	+		MPMX19_03641	0.74	-0.4
1,077,333	+		MPMX19_03641	0.74	-0.0
1,077,334	-		MPMX19_03641	0.74	-0.7
1,077,334	-		MPMX19_03641	0.74	-0.4
1,077,334	-		MPMX19_03641	0.74	+0.2
1,077,334	-		MPMX19_03641	0.74	+1.2
1,077,334	-		MPMX19_03641	0.74	-0.4
1,077,385	+		MPMX19_03641	0.77	-0.4
1,077,385	+		MPMX19_03641	0.77	-0.8
1,077,386	-		MPMX19_03641	0.77	+1.2
1,077,386	-		MPMX19_03641	0.77	+0.2
1,077,501	+		MPMX19_03641	0.83	+0.5
1,077,501	+		MPMX19_03641	0.83	-0.3
1,077,501	+		MPMX19_03641	0.83	-1.5
1,077,501	+		MPMX19_03641	0.83	+0.8
1,077,502	-		MPMX19_03641	0.83	-2.9
1,077,502	-		MPMX19_03641	0.83	-1.1
1,077,502	-		MPMX19_03641	0.83	+0.2
1,077,502	-		MPMX19_03641	0.83	-0.6
1,077,502	-		MPMX19_03641	0.83	+0.5
1,077,502	-		MPMX19_03641	0.83	+0.5
1,077,531	+		MPMX19_03641	0.85	-0.2
1,077,531	+		MPMX19_03641	0.85	-1.0
1,077,532	-		MPMX19_03641	0.85	+0.2
1,077,532	-		MPMX19_03641	0.85	+0.1
1,077,532	-		MPMX19_03641	0.85	-0.5
1,077,532	-		MPMX19_03641	0.85	-0.8
1,077,532	-		MPMX19_03641	0.85	-0.8
1,077,580	-		MPMX19_03641	0.88	-0.4
1,077,580	-		MPMX19_03641	0.88	-0.9
1,077,682	-				-0.6
1,077,923	+		MPMX19_03642	0.21	-0.4
1,077,924	-		MPMX19_03642	0.21	+0.5
1,078,015	+		MPMX19_03642	0.39	+0.8
1,078,015	+		MPMX19_03642	0.39	-1.2
1,078,016	-		MPMX19_03642	0.39	+0.2
1,078,016	-		MPMX19_03642	0.39	-0.6
1,078,368	+				-0.7
1,078,368	+				-1.6
1,078,368	+				-0.8
1,078,368	+				+0.1
1,078,369	-				+1.3
1,078,369	-				+0.6
1,078,369	-				-0.8
1,078,413	+				+0.5
1,078,413	+				-1.1
1,078,413	+				+1.0
1,078,413	+				+0.3
1,078,413	+				-0.1
1,078,413	+				-0.1
1,078,413	+				+0.1
1,078,414	-				+1.2
1,078,414	-				-0.1
1,078,414	-				+0.1
1,078,414	-				+0.2
1,078,512	+				+0.2
1,078,512	+				-0.7
1,078,512	+				+2.5
1,078,512	+				-0.6
1,078,512	+				+1.2
1,078,512	+				-1.4
1,078,513	-				+0.7
1,078,513	-				+0.5
1,078,513	-				-1.1
1,078,513	-				+1.0
1,078,513	-				-2.3
1,078,614	+		MPMX19_03643	0.14	-0.4
1,078,614	+		MPMX19_03643	0.14	-0.3
1,078,615	-		MPMX19_03643	0.14	+0.5
1,078,615	-		MPMX19_03643	0.14	+1.0
1,078,615	-		MPMX19_03643	0.14	+0.7
1,078,615	-		MPMX19_03643	0.14	+0.0
1,078,734	+		MPMX19_03643	0.20	+0.9
1,078,734	+		MPMX19_03643	0.20	-0.4
1,078,734	+		MPMX19_03643	0.20	-1.6
1,078,734	+		MPMX19_03643	0.20	-1.0
1,078,734	+		MPMX19_03643	0.20	-0.2
1,078,735	-		MPMX19_03643	0.20	+0.1
1,078,735	-		MPMX19_03643	0.20	-0.4
1,078,735	-		MPMX19_03643	0.20	+1.2
1,078,735	-		MPMX19_03643	0.20	+1.5
1,078,758	+		MPMX19_03643	0.21	-1.8
1,078,758	+		MPMX19_03643	0.21	-0.4
1,078,758	+		MPMX19_03643	0.21	+0.8
1,078,758	+		MPMX19_03643	0.21	+0.2
1,078,758	+		MPMX19_03643	0.21	-0.6
1,078,758	+		MPMX19_03643	0.21	-0.4
1,078,758	+		MPMX19_03643	0.21	-0.7
1,078,758	+		MPMX19_03643	0.21	+0.2
1,078,758	+		MPMX19_03643	0.21	-1.1
1,078,758	+		MPMX19_03643	0.21	+2.2
1,078,758	+		MPMX19_03643	0.21	-0.4
1,078,758	+		MPMX19_03643	0.21	-0.1
1,078,758	+		MPMX19_03643	0.21	+0.8
1,078,759	-		MPMX19_03643	0.21	+0.8
1,078,759	-		MPMX19_03643	0.21	+1.2
1,078,759	-		MPMX19_03643	0.21	-0.6
1,078,759	-		MPMX19_03643	0.21	+2.2
1,078,759	-		MPMX19_03643	0.21	-0.8
1,078,759	-		MPMX19_03643	0.21	+0.5
1,078,759	-		MPMX19_03643	0.21	-1.2
1,078,759	-		MPMX19_03643	0.21	+1.6
1,078,775	-		MPMX19_03643	0.22	+1.2
1,078,775	-		MPMX19_03643	0.22	-0.3
1,078,775	-		MPMX19_03643	0.22	+1.2
1,078,776	+		MPMX19_03643	0.22	-0.5
1,078,836	+		MPMX19_03643	0.25	-1.1
1,078,836	+		MPMX19_03643	0.25	-0.4
1,078,836	+		MPMX19_03643	0.25	-0.4
1,078,837	-		MPMX19_03643	0.25	-0.5
1,078,837	-		MPMX19_03643	0.25	+0.6
1,078,837	-		MPMX19_03643	0.25	-0.1
1,078,837	-		MPMX19_03643	0.25	+0.2
1,078,845	+		MPMX19_03643	0.26	-0.2
1,078,845	+		MPMX19_03643	0.26	+0.6
1,078,845	+		MPMX19_03643	0.26	+0.6
1,078,845	+		MPMX19_03643	0.26	-0.0
1,078,845	+		MPMX19_03643	0.26	-0.4
1,078,846	-		MPMX19_03643	0.26	-1.1
1,078,846	-		MPMX19_03643	0.26	-0.4
1,078,846	-		MPMX19_03643	0.26	-0.1
1,078,846	-		MPMX19_03643	0.26	+0.2
1,078,846	-		MPMX19_03643	0.26	-0.3
1,078,846	-		MPMX19_03643	0.26	-1.4
1,078,846	-		MPMX19_03643	0.26	-1.1
1,078,846	-		MPMX19_03643	0.26	+0.7
1,078,846	-		MPMX19_03643	0.26	-1.0
1,078,846	-		MPMX19_03643	0.26	-2.4
1,078,905	+		MPMX19_03643	0.29	-0.4
1,078,905	+		MPMX19_03643	0.29	+1.5
1,078,906	-		MPMX19_03643	0.29	-0.0
1,078,906	-		MPMX19_03643	0.29	-0.4
1,078,906	-		MPMX19_03643	0.29	+1.0
1,078,906	-		MPMX19_03643	0.29	-0.5
1,079,082	+		MPMX19_03643	0.38	-0.5
1,079,082	+		MPMX19_03643	0.38	+0.5
1,079,082	+		MPMX19_03643	0.38	-0.4
1,079,082	+		MPMX19_03643	0.38	-0.6
1,079,082	+		MPMX19_03643	0.38	-0.9
1,079,083	-		MPMX19_03643	0.38	+0.5
1,079,083	-		MPMX19_03643	0.38	-0.4
1,079,083	-		MPMX19_03643	0.38	-0.9
1,079,083	-		MPMX19_03643	0.38	-0.0
1,079,083	-		MPMX19_03643	0.38	+0.6
1,079,083	-		MPMX19_03643	0.38	+1.2
1,079,083	-		MPMX19_03643	0.38	-0.3
1,079,083	-		MPMX19_03643	0.38	+0.5
1,079,083	-		MPMX19_03643	0.38	+0.5
1,079,091	+		MPMX19_03643	0.38	-1.1
1,079,091	+		MPMX19_03643	0.38	-1.4
1,079,091	+		MPMX19_03643	0.38	+0.2
1,079,092	-		MPMX19_03643	0.39	-0.2
1,079,092	-		MPMX19_03643	0.39	+1.2
1,079,092	-		MPMX19_03643	0.39	-1.4
1,079,092	-		MPMX19_03643	0.39	-0.8
1,079,239	-		MPMX19_03643	0.46	-0.4
1,079,334	+		MPMX19_03643	0.51	+0.5
1,079,335	-		MPMX19_03643	0.51	+1.5