Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03285

Experiment: NF_with_fullN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03284 and MPMX19_03285 overlap by 4 nucleotidesMPMX19_03285 and MPMX19_03286 are separated by 212 nucleotides MPMX19_03284: MPMX19_03284 - Apulose-4-phosphate transketolase subunit B, at 630,016 to 631,047 _03284 MPMX19_03285: MPMX19_03285 - Apulose-4-phosphate transketolase subunit A, at 631,044 to 632,012 _03285 MPMX19_03286: MPMX19_03286 - Putrescine--pyruvate aminotransferase, at 632,225 to 633,604 _03286 Position (kb) 631 632 633Strain fitness (log2 ratio) -2 -1 0 1 2at 630.068 kb on + strandat 630.078 kb on - strandat 630.107 kb on + strandat 630.107 kb on + strandat 630.107 kb on + strandat 630.438 kb on - strand, within MPMX19_03284at 630.473 kb on + strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.474 kb on - strand, within MPMX19_03284at 630.608 kb on + strand, within MPMX19_03284at 630.608 kb on + strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.609 kb on - strand, within MPMX19_03284at 630.665 kb on + strand, within MPMX19_03284at 630.666 kb on - strand, within MPMX19_03284at 630.851 kb on + strand, within MPMX19_03284at 630.852 kb on - strand, within MPMX19_03284at 630.852 kb on - strand, within MPMX19_03284at 630.852 kb on - strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.923 kb on + strand, within MPMX19_03284at 630.924 kb on - strand, within MPMX19_03284at 630.924 kb on - strand, within MPMX19_03284at 630.924 kb on - strand, within MPMX19_03284at 630.924 kb on - strand, within MPMX19_03284at 631.148 kb on - strand, within MPMX19_03285at 631.180 kb on + strand, within MPMX19_03285at 631.180 kb on + strand, within MPMX19_03285at 631.181 kb on - strand, within MPMX19_03285at 631.181 kb on - strand, within MPMX19_03285at 631.384 kb on + strand, within MPMX19_03285at 631.384 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.495 kb on + strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.496 kb on - strand, within MPMX19_03285at 631.645 kb on + strand, within MPMX19_03285at 631.645 kb on + strand, within MPMX19_03285at 631.645 kb on + strand, within MPMX19_03285at 631.646 kb on - strand, within MPMX19_03285at 631.646 kb on - strand, within MPMX19_03285at 631.697 kb on - strand, within MPMX19_03285at 631.697 kb on - strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.786 kb on + strand, within MPMX19_03285at 631.787 kb on - strand, within MPMX19_03285at 631.787 kb on - strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.789 kb on + strand, within MPMX19_03285at 631.790 kb on - strand, within MPMX19_03285at 631.831 kb on + strand, within MPMX19_03285at 631.831 kb on + strand, within MPMX19_03285at 631.831 kb on + strand, within MPMX19_03285at 631.831 kb on + strand, within MPMX19_03285at 631.832 kb on - strand, within MPMX19_03285at 632.363 kb on + strand, within MPMX19_03286at 632.363 kb on + strand, within MPMX19_03286at 632.363 kb on + strand, within MPMX19_03286at 632.364 kb on - strand, within MPMX19_03286at 632.364 kb on - strand, within MPMX19_03286at 632.365 kb on + strand, within MPMX19_03286at 632.366 kb on - strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.462 kb on + strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.463 kb on - strand, within MPMX19_03286at 632.606 kb on + strand, within MPMX19_03286at 632.606 kb on + strand, within MPMX19_03286at 632.606 kb on + strand, within MPMX19_03286at 632.607 kb on - strand, within MPMX19_03286at 632.607 kb on - strand, within MPMX19_03286at 632.607 kb on - strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.609 kb on + strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.610 kb on - strand, within MPMX19_03286at 632.810 kb on + strand, within MPMX19_03286at 632.811 kb on - strand, within MPMX19_03286at 632.811 kb on - strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.933 kb on + strand, within MPMX19_03286at 632.934 kb on - strand, within MPMX19_03286at 632.934 kb on - strand, within MPMX19_03286at 632.934 kb on - strand, within MPMX19_03286at 632.934 kb on - strand, within MPMX19_03286at 632.934 kb on - strand, within MPMX19_03286

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Per-strain Table

Position Strand Gene LocusTag Fraction NF_with_fullN
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630,068 + -0.4
630,078 - -0.8
630,107 + +0.6
630,107 + -0.4
630,107 + -0.4
630,438 - MPMX19_03284 0.41 -1.1
630,473 + MPMX19_03284 0.44 +0.9
630,474 - MPMX19_03284 0.44 +1.9
630,474 - MPMX19_03284 0.44 +0.6
630,474 - MPMX19_03284 0.44 -1.7
630,474 - MPMX19_03284 0.44 +0.2
630,474 - MPMX19_03284 0.44 -1.2
630,474 - MPMX19_03284 0.44 +0.4
630,474 - MPMX19_03284 0.44 -1.1
630,608 + MPMX19_03284 0.57 +0.6
630,608 + MPMX19_03284 0.57 -0.1
630,609 - MPMX19_03284 0.57 +1.2
630,609 - MPMX19_03284 0.57 -0.7
630,609 - MPMX19_03284 0.57 -0.4
630,609 - MPMX19_03284 0.57 -0.6
630,609 - MPMX19_03284 0.57 -0.4
630,609 - MPMX19_03284 0.57 -1.6
630,665 + MPMX19_03284 0.63 -1.8
630,666 - MPMX19_03284 0.63 -0.1
630,851 + MPMX19_03284 0.81 +0.2
630,852 - MPMX19_03284 0.81 -1.0
630,852 - MPMX19_03284 0.81 -0.4
630,852 - MPMX19_03284 0.81 +1.2
630,923 + MPMX19_03284 0.88 +0.5
630,923 + MPMX19_03284 0.88 -1.0
630,923 + MPMX19_03284 0.88 +0.2
630,923 + MPMX19_03284 0.88 -0.1
630,923 + MPMX19_03284 0.88 +0.7
630,923 + MPMX19_03284 0.88 +1.5
630,924 - MPMX19_03284 0.88 -0.6
630,924 - MPMX19_03284 0.88 -1.3
630,924 - MPMX19_03284 0.88 +1.2
630,924 - MPMX19_03284 0.88 -1.0
631,148 - MPMX19_03285 0.11 -1.8
631,180 + MPMX19_03285 0.14 -1.6
631,180 + MPMX19_03285 0.14 +0.2
631,181 - MPMX19_03285 0.14 -0.4
631,181 - MPMX19_03285 0.14 -0.2
631,384 + MPMX19_03285 0.35 +0.2
631,384 + MPMX19_03285 0.35 -0.1
631,495 + MPMX19_03285 0.47 -1.1
631,495 + MPMX19_03285 0.47 -0.7
631,495 + MPMX19_03285 0.47 -0.4
631,495 + MPMX19_03285 0.47 -1.3
631,495 + MPMX19_03285 0.47 -2.0
631,495 + MPMX19_03285 0.47 +0.9
631,495 + MPMX19_03285 0.47 +0.2
631,495 + MPMX19_03285 0.47 +0.2
631,495 + MPMX19_03285 0.47 +0.6
631,495 + MPMX19_03285 0.47 -1.1
631,495 + MPMX19_03285 0.47 -0.4
631,496 - MPMX19_03285 0.47 -0.5
631,496 - MPMX19_03285 0.47 -1.1
631,496 - MPMX19_03285 0.47 +0.2
631,496 - MPMX19_03285 0.47 -0.6
631,496 - MPMX19_03285 0.47 +1.8
631,496 - MPMX19_03285 0.47 +0.4
631,496 - MPMX19_03285 0.47 -2.0
631,496 - MPMX19_03285 0.47 -0.4
631,496 - MPMX19_03285 0.47 -0.9
631,496 - MPMX19_03285 0.47 +1.2
631,645 + MPMX19_03285 0.62 +0.3
631,645 + MPMX19_03285 0.62 +0.8
631,645 + MPMX19_03285 0.62 +0.6
631,646 - MPMX19_03285 0.62 -1.4
631,646 - MPMX19_03285 0.62 +0.5
631,697 - MPMX19_03285 0.67 -0.7
631,697 - MPMX19_03285 0.67 +1.2
631,786 + MPMX19_03285 0.77 -0.4
631,786 + MPMX19_03285 0.77 +0.2
631,786 + MPMX19_03285 0.77 +1.2
631,786 + MPMX19_03285 0.77 +0.2
631,786 + MPMX19_03285 0.77 +2.4
631,786 + MPMX19_03285 0.77 -0.1
631,786 + MPMX19_03285 0.77 +0.4
631,787 - MPMX19_03285 0.77 -0.4
631,787 - MPMX19_03285 0.77 -0.2
631,789 + MPMX19_03285 0.77 -0.1
631,789 + MPMX19_03285 0.77 +0.6
631,789 + MPMX19_03285 0.77 -1.8
631,789 + MPMX19_03285 0.77 +0.1
631,789 + MPMX19_03285 0.77 -0.0
631,789 + MPMX19_03285 0.77 +1.2
631,789 + MPMX19_03285 0.77 +1.0
631,789 + MPMX19_03285 0.77 -1.6
631,790 - MPMX19_03285 0.77 +0.2
631,831 + MPMX19_03285 0.81 +0.2
631,831 + MPMX19_03285 0.81 -0.4
631,831 + MPMX19_03285 0.81 +0.4
631,831 + MPMX19_03285 0.81 -1.1
631,832 - MPMX19_03285 0.81 -0.6
632,363 + MPMX19_03286 0.10 -0.8
632,363 + MPMX19_03286 0.10 -1.8
632,363 + MPMX19_03286 0.10 +0.7
632,364 - MPMX19_03286 0.10 +0.9
632,364 - MPMX19_03286 0.10 -0.1
632,365 + MPMX19_03286 0.10 +1.2
632,366 - MPMX19_03286 0.10 +0.2
632,462 + MPMX19_03286 0.17 +0.2
632,462 + MPMX19_03286 0.17 +1.3
632,462 + MPMX19_03286 0.17 -1.1
632,462 + MPMX19_03286 0.17 +0.6
632,462 + MPMX19_03286 0.17 +0.2
632,462 + MPMX19_03286 0.17 -0.3
632,462 + MPMX19_03286 0.17 +0.3
632,463 - MPMX19_03286 0.17 -0.2
632,463 - MPMX19_03286 0.17 +0.7
632,463 - MPMX19_03286 0.17 +1.2
632,463 - MPMX19_03286 0.17 -0.4
632,463 - MPMX19_03286 0.17 -0.0
632,463 - MPMX19_03286 0.17 -0.6
632,463 - MPMX19_03286 0.17 -1.0
632,463 - MPMX19_03286 0.17 -1.4
632,463 - MPMX19_03286 0.17 -0.8
632,463 - MPMX19_03286 0.17 -1.9
632,606 + MPMX19_03286 0.28 -1.1
632,606 + MPMX19_03286 0.28 +0.4
632,606 + MPMX19_03286 0.28 -0.3
632,607 - MPMX19_03286 0.28 +0.2
632,607 - MPMX19_03286 0.28 +0.2
632,607 - MPMX19_03286 0.28 +0.2
632,609 + MPMX19_03286 0.28 -0.1
632,609 + MPMX19_03286 0.28 -1.0
632,609 + MPMX19_03286 0.28 +2.2
632,609 + MPMX19_03286 0.28 -2.6
632,609 + MPMX19_03286 0.28 -0.4
632,609 + MPMX19_03286 0.28 +1.2
632,609 + MPMX19_03286 0.28 -0.4
632,609 + MPMX19_03286 0.28 -0.2
632,609 + MPMX19_03286 0.28 -0.8
632,610 - MPMX19_03286 0.28 -0.6
632,610 - MPMX19_03286 0.28 -0.1
632,610 - MPMX19_03286 0.28 -1.5
632,610 - MPMX19_03286 0.28 +0.8
632,610 - MPMX19_03286 0.28 -0.6
632,610 - MPMX19_03286 0.28 -0.5
632,610 - MPMX19_03286 0.28 -1.1
632,610 - MPMX19_03286 0.28 +0.7
632,810 + MPMX19_03286 0.42 +0.6
632,811 - MPMX19_03286 0.42 +0.6
632,811 - MPMX19_03286 0.42 -0.8
632,933 + MPMX19_03286 0.51 +0.4
632,933 + MPMX19_03286 0.51 -1.0
632,933 + MPMX19_03286 0.51 -0.8
632,933 + MPMX19_03286 0.51 -1.4
632,933 + MPMX19_03286 0.51 -0.4
632,933 + MPMX19_03286 0.51 +0.8
632,933 + MPMX19_03286 0.51 -0.5
632,934 - MPMX19_03286 0.51 +0.2
632,934 - MPMX19_03286 0.51 +0.2
632,934 - MPMX19_03286 0.51 +0.5
632,934 - MPMX19_03286 0.51 -0.7
632,934 - MPMX19_03286 0.51 -1.6

Or see this region's nucleotide sequence