Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02527

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,647,962	+				-0.4
2,647,962	+				-0.4
2,647,968	+				-1.0
2,647,968	+				+0.3
2,647,968	+				-0.8
2,647,969	-				+0.5
2,647,969	-				-1.4
2,648,106	-		MPMX19_02527	0.21	-2.5
2,648,106	-		MPMX19_02527	0.21	-0.4
2,648,168	+		MPMX19_02527	0.29	+1.2
2,648,168	+		MPMX19_02527	0.29	-0.4
2,648,168	+		MPMX19_02527	0.29	+0.0
2,648,168	+		MPMX19_02527	0.29	-0.6
2,648,169	-		MPMX19_02527	0.29	+0.0
2,648,332	+		MPMX19_02527	0.52	-0.0
2,648,457	-		MPMX19_02527	0.69	+0.2
2,648,489	-		MPMX19_02527	0.73	-0.8
2,648,731	+				+1.6
2,648,731	+				-1.2
2,648,731	+				-2.4
2,648,731	+				-2.2
2,648,731	+				-1.4
2,648,731	+				-2.0
2,648,732	-				-0.2
2,648,732	-				+0.2
2,648,732	-				+0.6
2,648,732	-				-1.0
2,648,732	-				+0.2
2,648,732	-				-1.7
2,648,732	-				+0.6
2,648,869	+		MPMX19_02528	0.15	+0.0
2,648,869	+		MPMX19_02528	0.15	-1.0
2,648,869	+		MPMX19_02528	0.15	-0.7
2,648,869	+		MPMX19_02528	0.15	+0.0
2,648,869	+		MPMX19_02528	0.15	-1.7
2,648,869	+		MPMX19_02528	0.15	-0.4
2,648,869	+		MPMX19_02528	0.15	-0.4
2,648,869	+		MPMX19_02528	0.15	+1.0
2,648,869	+		MPMX19_02528	0.15	-1.0
2,648,869	+		MPMX19_02528	0.15	-0.2
2,648,869	+		MPMX19_02528	0.15	+0.6
2,648,869	+		MPMX19_02528	0.15	+2.2
2,648,869	+		MPMX19_02528	0.15	-1.4
2,648,869	+		MPMX19_02528	0.15	-1.0
2,648,869	+		MPMX19_02528	0.15	-0.2
2,648,869	+		MPMX19_02528	0.15	+0.4
2,648,869	+		MPMX19_02528	0.15	-0.4
2,648,869	+		MPMX19_02528	0.15	-0.7
2,648,869	+		MPMX19_02528	0.15	-0.4
2,648,869	+		MPMX19_02528	0.15	-0.4
2,648,869	+		MPMX19_02528	0.15	-0.1
2,648,870	-		MPMX19_02528	0.15	-1.7
2,648,870	-		MPMX19_02528	0.15	+0.1
2,648,870	-		MPMX19_02528	0.15	+0.6
2,648,870	-		MPMX19_02528	0.15	+0.6
2,648,870	-		MPMX19_02528	0.15	-0.9
2,648,870	-		MPMX19_02528	0.15	+0.4
2,648,870	-		MPMX19_02528	0.15	-1.0
2,648,870	-		MPMX19_02528	0.15	-1.1
2,648,870	-		MPMX19_02528	0.15	+0.1
2,648,870	-		MPMX19_02528	0.15	-1.1
2,648,870	-		MPMX19_02528	0.15	-0.4
2,648,870	-		MPMX19_02528	0.15	+0.3
2,648,870	-		MPMX19_02528	0.15	-1.0
2,648,870	-		MPMX19_02528	0.15	-2.0
2,648,870	-		MPMX19_02528	0.15	-1.7
2,648,870	-		MPMX19_02528	0.15	-1.1
2,648,870	-		MPMX19_02528	0.15	+1.4
2,648,870	-		MPMX19_02528	0.15	-0.9
2,648,902	+		MPMX19_02528	0.23	+0.0
2,648,902	+		MPMX19_02528	0.23	+0.3
2,648,902	+		MPMX19_02528	0.23	-0.0
2,648,902	+		MPMX19_02528	0.23	-0.6
2,648,902	+		MPMX19_02528	0.23	+0.6
2,648,902	+		MPMX19_02528	0.23	-0.4
2,648,902	+		MPMX19_02528	0.23	-3.0
2,648,902	+		MPMX19_02528	0.23	-2.2
2,648,902	+		MPMX19_02528	0.23	+0.6
2,648,902	+		MPMX19_02528	0.23	-1.0
2,648,902	+		MPMX19_02528	0.23	-1.0
2,648,902	+		MPMX19_02528	0.23	+0.1
2,648,902	+		MPMX19_02528	0.23	+1.2
2,648,902	+		MPMX19_02528	0.23	+0.0
2,648,903	-		MPMX19_02528	0.23	-0.4
2,648,903	-		MPMX19_02528	0.23	+1.0
2,648,903	-		MPMX19_02528	0.23	-0.7
2,648,903	-		MPMX19_02528	0.23	-1.0
2,648,903	-		MPMX19_02528	0.23	-1.7
2,648,903	-		MPMX19_02528	0.23	-2.5
2,648,903	-		MPMX19_02528	0.23	+0.6
2,648,903	-		MPMX19_02528	0.23	+1.3
2,648,903	-		MPMX19_02528	0.23	-1.4
2,648,903	-		MPMX19_02528	0.23	-0.3
2,648,903	-		MPMX19_02528	0.23	+0.6
2,648,903	-		MPMX19_02528	0.23	-0.1
2,648,903	-		MPMX19_02528	0.23	-0.9
2,648,903	-		MPMX19_02528	0.23	-1.4
2,648,903	-		MPMX19_02528	0.23	+1.0
2,648,903	-		MPMX19_02528	0.23	-0.5
2,648,903	-		MPMX19_02528	0.23	+0.4
2,648,903	-		MPMX19_02528	0.23	-1.4
2,648,903	-		MPMX19_02528	0.23	-1.4
2,648,903	-		MPMX19_02528	0.23	-0.4
2,648,998	+		MPMX19_02528	0.45	-1.4
2,648,998	+		MPMX19_02528	0.45	+1.2
2,648,998	+		MPMX19_02528	0.45	+0.1
2,649,147	+		MPMX19_02528	0.79	-0.1
2,649,147	+		MPMX19_02528	0.79	+0.0
2,649,147	+		MPMX19_02528	0.79	+0.6
2,649,147	+		MPMX19_02528	0.79	-1.4
2,649,147	+		MPMX19_02528	0.79	-0.6
2,649,147	+		MPMX19_02528	0.79	+0.0
2,649,147	+		MPMX19_02528	0.79	-2.2
2,649,147	+		MPMX19_02528	0.79	+1.6
2,649,147	+		MPMX19_02528	0.79	-0.0
2,649,147	+		MPMX19_02528	0.79	+0.4
2,649,147	+		MPMX19_02528	0.79	+0.6
2,649,147	+		MPMX19_02528	0.79	-1.0
2,649,147	+		MPMX19_02528	0.79	-0.2
2,649,147	+		MPMX19_02528	0.79	+0.6
2,649,147	+		MPMX19_02528	0.79	-1.4
2,649,148	-		MPMX19_02528	0.79	+0.3
2,649,148	-		MPMX19_02528	0.79	+0.4
2,649,148	-		MPMX19_02528	0.79	-1.4
2,649,148	-		MPMX19_02528	0.79	-2.4
2,649,148	-		MPMX19_02528	0.79	+0.9
2,649,148	-		MPMX19_02528	0.79	-1.7
2,649,148	-		MPMX19_02528	0.79	-0.9
2,649,148	-		MPMX19_02528	0.79	-0.2
2,649,148	-		MPMX19_02528	0.79	+0.9
2,649,148	-		MPMX19_02528	0.79	-0.5
2,649,148	-		MPMX19_02528	0.79	+0.6
2,649,148	-		MPMX19_02528	0.79	-0.1
2,649,148	-		MPMX19_02528	0.79	-0.4
2,649,148	-		MPMX19_02528	0.79	+1.6
2,649,252	+				-0.5
2,649,252	+				-0.8
2,649,252	+				+0.6
2,649,252	+				-0.4
2,649,252	+				+1.3
2,649,252	+				-0.2
2,649,252	+				-0.1
2,649,252	+				-1.5
2,649,252	+				-0.0
2,649,252	+				-0.4
2,649,252	+				-0.4
2,649,252	+				-1.0
2,649,252	+				-0.1
2,649,252	+				+0.6
2,649,252	+				-0.4
2,649,252	+				-0.7
2,649,252	+				+0.2
2,649,252	+				+0.2
2,649,252	+				-0.3
2,649,252	+				+0.1
2,649,252	+				+0.1
2,649,252	+				-0.2
2,649,252	+				-0.7
2,649,252	+				-1.0
2,649,252	+				-0.4
2,649,252	+				+1.0
2,649,252	-				-2.0
2,649,253	-				+0.6
2,649,253	-				+0.6
2,649,253	-				-0.1
2,649,253	-				-0.3
2,649,253	-				-1.8
2,649,253	-				+0.0
2,649,253	-				-2.5
2,649,253	-				-0.7
2,649,253	-				-0.5
2,649,253	-				-0.5
2,649,253	-				-0.1
2,649,253	-				-1.0
2,649,253	-				+0.6
2,649,253	-				-1.4
2,649,253	-				+2.0
2,649,253	-				-1.7
2,649,253	-				-0.4
2,649,253	-				+0.4
2,649,253	-				-0.6
2,649,253	-				-1.4
2,649,253	-				-1.4
2,649,253	-				+0.4
2,649,253	-				-1.0
2,649,253	-				-0.4
2,649,253	-				-0.8
2,649,253	-				-0.5
2,649,253	-				+1.0
2,649,253	-				-0.7
2,649,381	+		MPMX19_02529	0.32	+0.9
2,649,381	+		MPMX19_02529	0.32	-1.6
2,649,381	+		MPMX19_02529	0.32	+1.2
2,649,381	+		MPMX19_02529	0.32	-0.7
2,649,381	+		MPMX19_02529	0.32	+0.3
2,649,381	+		MPMX19_02529	0.32	-0.4
2,649,381	+		MPMX19_02529	0.32	+0.0
2,649,381	+		MPMX19_02529	0.32	+0.3
2,649,381	+		MPMX19_02529	0.32	+1.3
2,649,381	+		MPMX19_02529	0.32	+0.0
2,649,381	+		MPMX19_02529	0.32	-0.1
2,649,381	+		MPMX19_02529	0.32	-0.2
2,649,381	+		MPMX19_02529	0.32	-1.1
2,649,381	+		MPMX19_02529	0.32	+0.0
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	+0.9
2,649,381	+		MPMX19_02529	0.32	-0.4
2,649,381	+		MPMX19_02529	0.32	-0.1
2,649,381	+		MPMX19_02529	0.32	+1.0
2,649,381	+		MPMX19_02529	0.32	+0.3
2,649,381	+		MPMX19_02529	0.32	-1.0
2,649,381	+		MPMX19_02529	0.32	-0.5
2,649,381	+		MPMX19_02529	0.32	+0.3
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	-0.4
2,649,381	+		MPMX19_02529	0.32	+1.6
2,649,381	+		MPMX19_02529	0.32	+0.0
2,649,381	+		MPMX19_02529	0.32	-1.8
2,649,381	+		MPMX19_02529	0.32	+0.2
2,649,381	+		MPMX19_02529	0.32	+0.2
2,649,381	+		MPMX19_02529	0.32	+1.4
2,649,381	+		MPMX19_02529	0.32	-2.0
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	-1.7
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	-0.6
2,649,381	+		MPMX19_02529	0.32	+1.2
2,649,381	+		MPMX19_02529	0.32	-0.1
2,649,381	+		MPMX19_02529	0.32	-0.5
2,649,381	+		MPMX19_02529	0.32	+0.4
2,649,381	+		MPMX19_02529	0.32	-1.7
2,649,381	+		MPMX19_02529	0.32	+1.6
2,649,381	+		MPMX19_02529	0.32	+1.4
2,649,381	+		MPMX19_02529	0.32	+2.0
2,649,381	+		MPMX19_02529	0.32	+0.8
2,649,381	+		MPMX19_02529	0.32	+0.0
2,649,381	+		MPMX19_02529	0.32	+2.2
2,649,381	+		MPMX19_02529	0.32	-0.4
2,649,381	+		MPMX19_02529	0.32	+2.6
2,649,381	+		MPMX19_02529	0.32	+0.5
2,649,381	+		MPMX19_02529	0.32	-0.1
2,649,381	+		MPMX19_02529	0.32	+0.6
2,649,381	+		MPMX19_02529	0.32	+0.4
2,649,381	+		MPMX19_02529	0.32	+0.4
2,649,382	-		MPMX19_02529	0.32	-0.2
2,649,382	-		MPMX19_02529	0.32	+0.2
2,649,382	-		MPMX19_02529	0.32	-0.6
2,649,382	-		MPMX19_02529	0.32	+0.3
2,649,382	-		MPMX19_02529	0.32	-0.1
2,649,382	-		MPMX19_02529	0.32	+1.1
2,649,382	-		MPMX19_02529	0.32	+0.6
2,649,382	-		MPMX19_02529	0.32	+0.0
2,649,382	-		MPMX19_02529	0.32	+2.0
2,649,382	-		MPMX19_02529	0.32	-0.4
2,649,382	-		MPMX19_02529	0.32	+0.2
2,649,382	-		MPMX19_02529	0.32	-1.4
2,649,382	-		MPMX19_02529	0.32	-1.4
2,649,382	-		MPMX19_02529	0.32	-0.2
2,649,382	-		MPMX19_02529	0.32	+0.3
2,649,382	-		MPMX19_02529	0.32	-1.0
2,649,382	-		MPMX19_02529	0.32	-1.7
2,649,382	-		MPMX19_02529	0.32	-0.6
2,649,382	-		MPMX19_02529	0.32	+1.0
2,649,382	-		MPMX19_02529	0.32	+2.0
2,649,382	-		MPMX19_02529	0.32	-0.7
2,649,382	-		MPMX19_02529	0.32	+0.5
2,649,382	-		MPMX19_02529	0.32	+1.0
2,649,382	-		MPMX19_02529	0.32	+1.6
2,649,382	-		MPMX19_02529	0.32	-0.5
2,649,382	-		MPMX19_02529	0.32	+0.6
2,649,382	-		MPMX19_02529	0.32	-0.1
2,649,382	-		MPMX19_02529	0.32	-1.0
2,649,382	-		MPMX19_02529	0.32	-1.2
2,649,382	-		MPMX19_02529	0.32	+0.9
2,649,382	-		MPMX19_02529	0.32	-0.4
2,649,382	-		MPMX19_02529	0.32	-1.2
2,649,382	-		MPMX19_02529	0.32	+0.6
2,649,382	-		MPMX19_02529	0.32	-0.1
2,649,382	-		MPMX19_02529	0.32	+0.8
2,649,382	-		MPMX19_02529	0.32	-2.4
2,649,382	-		MPMX19_02529	0.32	+1.6
2,649,382	-		MPMX19_02529	0.32	+0.0
2,649,382	-		MPMX19_02529	0.32	-0.4
2,649,382	-		MPMX19_02529	0.32	-0.7
2,649,382	-		MPMX19_02529	0.32	-2.0
2,649,382	-		MPMX19_02529	0.32	-0.4
2,649,382	-		MPMX19_02529	0.32	-0.9
2,649,382	-		MPMX19_02529	0.32	-0.6
2,649,382	-		MPMX19_02529	0.32	-0.1
2,649,382	-		MPMX19_02529	0.32	+0.1
2,649,382	-		MPMX19_02529	0.32	-1.0
2,649,382	-		MPMX19_02529	0.32	+0.6
2,649,384	+		MPMX19_02529	0.32	+1.2
2,649,384	+		MPMX19_02529	0.32	+1.0
2,649,384	+		MPMX19_02529	0.32	-0.1
2,649,384	+		MPMX19_02529	0.32	-1.7
2,649,384	+		MPMX19_02529	0.32	+0.6
2,649,384	+		MPMX19_02529	0.32	+0.2
2,649,385	-		MPMX19_02529	0.32	+0.4
2,649,385	-		MPMX19_02529	0.32	+0.6
2,649,385	-		MPMX19_02529	0.32	+0.6
2,649,385	-		MPMX19_02529	0.32	-0.4
2,649,385	-		MPMX19_02529	0.32	+0.0
2,649,385	-		MPMX19_02529	0.32	-0.7
2,649,385	-		MPMX19_02529	0.32	+0.4
2,649,385	-		MPMX19_02529	0.32	+0.6
2,649,385	-		MPMX19_02529	0.32	-0.7
2,649,385	-		MPMX19_02529	0.32	-0.4
2,649,385	-		MPMX19_02529	0.32	+0.6
2,649,594	+		MPMX19_02529	0.78	-2.0