Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01528

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,600,349	+		MPMX19_01526	0.38	-1.3
1,600,349	+		MPMX19_01526	0.38	-0.2
1,600,349	+		MPMX19_01526	0.38	-1.8
1,600,349	+		MPMX19_01526	0.38	+2.0
1,600,349	+		MPMX19_01526	0.38	-0.4
1,600,349	+		MPMX19_01526	0.38	-0.2
1,600,349	+		MPMX19_01526	0.38	+0.0
1,600,349	+		MPMX19_01526	0.38	+1.0
1,600,349	+		MPMX19_01526	0.38	+0.1
1,600,349	+		MPMX19_01526	0.38	-0.8
1,600,349	+		MPMX19_01526	0.38	+0.2
1,600,349	+		MPMX19_01526	0.38	-0.2
1,600,349	+		MPMX19_01526	0.38	+0.5
1,600,349	+		MPMX19_01526	0.38	+0.0
1,600,349	+		MPMX19_01526	0.38	+0.0
1,600,349	+		MPMX19_01526	0.38	-0.7
1,600,350	-		MPMX19_01526	0.38	-0.4
1,600,350	-		MPMX19_01526	0.38	+0.0
1,600,350	-		MPMX19_01526	0.38	-0.3
1,600,350	-		MPMX19_01526	0.38	-0.2
1,600,350	-		MPMX19_01526	0.38	-0.6
1,600,760	+		MPMX19_01526	0.86	+0.0
1,600,760	+		MPMX19_01526	0.86	-1.8
1,600,760	+		MPMX19_01526	0.86	-0.2
1,600,760	+		MPMX19_01526	0.86	-1.6
1,600,760	+		MPMX19_01526	0.86	+0.0
1,600,761	-		MPMX19_01526	0.86	+1.0
1,600,761	-		MPMX19_01526	0.86	-0.4
1,600,761	-		MPMX19_01526	0.86	-0.1
1,600,817	+				-1.6
1,600,817	+				-1.0
1,600,817	+				-1.0
1,600,817	+				-0.8
1,600,818	-				+0.0
1,600,818	-				-1.0
1,600,883	+				-0.2
1,600,883	+				-1.6
1,600,884	-				-1.3
1,600,884	-				-1.0
1,600,884	-				+0.0
1,600,974	+				+0.5
1,600,974	+				+0.3
1,600,974	+				-0.6
1,600,974	+				+0.4
1,600,974	+				-1.6
1,600,974	+				-0.3
1,600,975	-				+0.0
1,600,975	-				-1.3
1,600,975	-				-1.1
1,600,975	-				+0.4
1,601,271	+				+1.3
1,601,271	+				-0.2
1,601,271	+				+0.6
1,601,272	-				-1.1
1,601,323	+				-0.6
1,601,323	+				-1.6
1,601,323	+				+0.0
1,601,323	+				-1.0
1,601,324	-				-1.2
1,601,348	+				+1.0
1,601,348	+				-1.6
1,601,348	+				-1.9
1,601,349	-				-1.0
1,601,349	-				-0.8
1,601,349	-				+0.0
1,601,349	-				-0.1
1,601,349	-				-1.0
1,601,384	+				-1.0
1,601,384	+				-0.5
1,601,384	+				+0.0
1,601,384	+				-0.6
1,601,384	+				-2.2
1,601,384	+				-1.0
1,601,384	+				+0.0
1,601,384	+				+0.0
1,601,384	+				-1.0
1,601,385	-				-0.2
1,601,385	-				-0.2
1,601,385	-				-0.1
1,601,385	-				-0.8
1,601,435	+				+0.6
1,601,435	+				-0.3
1,601,435	+				-1.3
1,601,435	+				+0.0
1,601,435	+				-0.4
1,601,435	+				-1.0
1,601,435	+				-0.4
1,601,435	+				-1.8
1,601,435	+				+0.1
1,601,435	+				+0.0
1,601,435	+				+0.4
1,601,435	+				-1.3
1,601,435	+				-1.6
1,601,435	+				-1.8
1,601,435	+				-0.3
1,601,436	-				-0.2
1,601,436	-				-1.5
1,601,436	-				-0.6
1,601,436	-				-1.2
1,601,436	-				-1.4
1,601,436	-				-1.9
1,601,436	-				+1.0
1,601,436	-				-1.6
1,601,436	-				-0.9
1,601,436	-				-1.2
1,601,436	-				-0.6
1,601,468	+				-1.4
1,601,468	+				-2.7
1,601,468	+				-0.6
1,601,469	-				-0.8
1,601,469	-				-2.2
1,601,469	-				-0.4
1,601,469	-				-0.7
1,601,469	-				-2.8
1,601,469	-				+1.0
1,601,469	-				-0.6
1,601,507	+		MPMX19_01528	0.12	-0.3
1,601,508	-		MPMX19_01528	0.12	+0.2
1,601,508	-		MPMX19_01528	0.12	+0.0
1,601,508	-		MPMX19_01528	0.12	+0.8
1,601,508	-		MPMX19_01528	0.12	-1.0
1,601,513	+		MPMX19_01528	0.13	-1.6
1,601,513	+		MPMX19_01528	0.13	+0.6
1,601,514	-		MPMX19_01528	0.13	+1.0
1,601,514	-		MPMX19_01528	0.13	-1.6
1,601,514	-		MPMX19_01528	0.13	-1.3
1,601,514	-		MPMX19_01528	0.13	+0.0
1,601,514	-		MPMX19_01528	0.13	-2.0
1,601,514	-		MPMX19_01528	0.13	-1.1
1,601,514	-		MPMX19_01528	0.13	-0.4
1,601,514	-		MPMX19_01528	0.13	+0.4
1,601,565	+		MPMX19_01528	0.17	-1.2
1,601,566	-		MPMX19_01528	0.17	-0.6
1,601,566	-		MPMX19_01528	0.17	-1.3
1,601,566	-		MPMX19_01528	0.17	-1.7
1,601,566	-		MPMX19_01528	0.17	+0.6
1,601,566	-		MPMX19_01528	0.17	-0.5
1,601,621	+		MPMX19_01528	0.21	-0.6
1,601,621	+		MPMX19_01528	0.21	-0.6
1,601,621	+		MPMX19_01528	0.21	-1.4
1,601,621	+		MPMX19_01528	0.21	-0.4
1,601,621	+		MPMX19_01528	0.21	-1.3
1,601,622	-		MPMX19_01528	0.21	+0.8
1,601,622	-		MPMX19_01528	0.21	-1.6
1,601,622	-		MPMX19_01528	0.21	-0.3
1,601,628	+		MPMX19_01528	0.21	-1.0
1,601,628	+		MPMX19_01528	0.21	-0.6
1,601,629	-		MPMX19_01528	0.21	+1.3
1,601,629	-		MPMX19_01528	0.21	+0.7
1,601,630	+		MPMX19_01528	0.21	-0.3
1,601,630	+		MPMX19_01528	0.21	+0.3
1,601,630	+		MPMX19_01528	0.21	-0.6
1,601,630	+		MPMX19_01528	0.21	-1.0
1,601,630	+		MPMX19_01528	0.21	-2.4
1,601,630	+		MPMX19_01528	0.21	-1.0
1,601,631	-		MPMX19_01528	0.22	-1.0
1,601,631	-		MPMX19_01528	0.22	+0.4
1,601,631	-		MPMX19_01528	0.22	+0.4
1,601,663	+		MPMX19_01528	0.24	-1.8
1,601,663	+		MPMX19_01528	0.24	-0.6
1,601,663	+		MPMX19_01528	0.24	-2.3
1,601,663	+		MPMX19_01528	0.24	-2.2
1,601,663	+		MPMX19_01528	0.24	-0.6
1,601,663	+		MPMX19_01528	0.24	-2.7
1,601,663	+		MPMX19_01528	0.24	+0.1
1,601,663	+		MPMX19_01528	0.24	-2.0
1,601,663	+		MPMX19_01528	0.24	-0.2
1,601,663	+		MPMX19_01528	0.24	-0.7
1,601,664	-		MPMX19_01528	0.24	-0.2
1,601,664	-		MPMX19_01528	0.24	-1.2
1,601,664	-		MPMX19_01528	0.24	-1.2
1,601,664	-		MPMX19_01528	0.24	-2.8
1,601,664	-		MPMX19_01528	0.24	-1.0
1,601,664	-		MPMX19_01528	0.24	+0.0
1,601,664	-		MPMX19_01528	0.24	-1.6
1,601,664	-		MPMX19_01528	0.24	-0.3
1,601,664	-		MPMX19_01528	0.24	-1.0
1,601,664	-		MPMX19_01528	0.24	+1.0
1,601,664	-		MPMX19_01528	0.24	+0.0
1,601,664	-		MPMX19_01528	0.24	-0.2
1,601,664	-		MPMX19_01528	0.24	+0.6
1,601,664	-		MPMX19_01528	0.24	-1.3
1,601,717	+		MPMX19_01528	0.28	-1.8
1,601,717	+		MPMX19_01528	0.28	-0.7
1,601,717	+		MPMX19_01528	0.28	+1.0
1,601,717	+		MPMX19_01528	0.28	+1.6
1,601,717	+		MPMX19_01528	0.28	-1.6
1,601,717	+		MPMX19_01528	0.28	+0.7
1,601,717	+		MPMX19_01528	0.28	+0.0
1,601,717	+		MPMX19_01528	0.28	+0.0
1,601,717	+		MPMX19_01528	0.28	-0.6
1,601,717	+		MPMX19_01528	0.28	+0.3
1,601,717	+		MPMX19_01528	0.28	+0.7
1,601,717	+		MPMX19_01528	0.28	-0.9
1,601,717	+		MPMX19_01528	0.28	+0.2
1,601,717	+		MPMX19_01528	0.28	-1.5
1,601,718	-		MPMX19_01528	0.28	-1.6
1,601,718	-		MPMX19_01528	0.28	-0.7
1,601,718	-		MPMX19_01528	0.28	-1.8
1,601,718	-		MPMX19_01528	0.28	-1.6
1,601,718	-		MPMX19_01528	0.28	-1.3
1,601,718	-		MPMX19_01528	0.28	-1.6
1,601,718	-		MPMX19_01528	0.28	-0.3
1,601,718	-		MPMX19_01528	0.28	+0.0
1,601,718	-		MPMX19_01528	0.28	-0.2
1,601,718	-		MPMX19_01528	0.28	-1.6
1,601,718	-		MPMX19_01528	0.28	+0.6
1,601,718	-		MPMX19_01528	0.28	-0.6
1,601,718	-		MPMX19_01528	0.28	+0.6
1,601,810	+		MPMX19_01528	0.35	-0.4
1,601,810	+		MPMX19_01528	0.35	-2.0
1,601,810	+		MPMX19_01528	0.35	-1.6
1,601,810	+		MPMX19_01528	0.35	+0.0
1,601,811	-		MPMX19_01528	0.35	-0.4
1,601,811	-		MPMX19_01528	0.35	-0.6
1,601,811	-		MPMX19_01528	0.35	-0.8
1,601,811	-		MPMX19_01528	0.35	-0.4
1,601,811	-		MPMX19_01528	0.35	+0.0
1,601,846	+		MPMX19_01528	0.38	-0.9
1,601,846	+		MPMX19_01528	0.38	-1.0
1,601,846	+		MPMX19_01528	0.38	-1.7
1,601,846	+		MPMX19_01528	0.38	-0.7
1,601,847	-		MPMX19_01528	0.38	-1.0
1,601,847	-		MPMX19_01528	0.38	-0.4
1,601,847	-		MPMX19_01528	0.38	-0.9
1,601,847	-		MPMX19_01528	0.38	+1.0
1,601,847	-		MPMX19_01528	0.38	+0.6
1,601,847	-		MPMX19_01528	0.38	-0.4
1,601,847	-		MPMX19_01528	0.38	-1.3
1,601,847	-		MPMX19_01528	0.38	+0.3
1,601,852	+		MPMX19_01528	0.38	+0.3
1,601,852	+		MPMX19_01528	0.38	-0.6
1,601,852	+		MPMX19_01528	0.38	-0.6
1,601,852	+		MPMX19_01528	0.38	+1.4
1,601,852	+		MPMX19_01528	0.38	-0.4
1,601,852	+		MPMX19_01528	0.38	-1.0
1,601,852	+		MPMX19_01528	0.38	+2.0
1,601,852	+		MPMX19_01528	0.38	-0.8
1,601,853	-		MPMX19_01528	0.38	-0.4
1,601,853	-		MPMX19_01528	0.38	-0.3
1,601,853	-		MPMX19_01528	0.38	-1.7
1,601,912	+		MPMX19_01528	0.43	+0.4
1,601,912	+		MPMX19_01528	0.43	-0.7
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	-1.6
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	-1.3
1,601,912	+		MPMX19_01528	0.43	+1.6
1,601,912	+		MPMX19_01528	0.43	-2.2
1,601,912	+		MPMX19_01528	0.43	+0.2
1,601,912	+		MPMX19_01528	0.43	-1.6
1,601,912	+		MPMX19_01528	0.43	+0.6
1,601,912	+		MPMX19_01528	0.43	-1.1
1,601,912	+		MPMX19_01528	0.43	-1.0
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	-0.7
1,601,912	+		MPMX19_01528	0.43	-0.8
1,601,912	+		MPMX19_01528	0.43	+0.7
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	-1.7
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	+0.3
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	-1.2
1,601,912	+		MPMX19_01528	0.43	-1.5
1,601,912	+		MPMX19_01528	0.43	+0.0
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,913	-		MPMX19_01528	0.43	-0.3
1,601,913	-		MPMX19_01528	0.43	-1.6
1,601,913	-		MPMX19_01528	0.43	-1.3
1,601,913	-		MPMX19_01528	0.43	+0.0
1,601,913	-		MPMX19_01528	0.43	-2.0
1,601,913	-		MPMX19_01528	0.43	-1.7
1,601,913	-		MPMX19_01528	0.43	-1.0
1,601,913	-		MPMX19_01528	0.43	-0.6
1,601,913	-		MPMX19_01528	0.43	-1.3
1,601,913	-		MPMX19_01528	0.43	-0.2
1,601,913	-		MPMX19_01528	0.43	+0.6
1,601,913	-		MPMX19_01528	0.43	-1.3
1,601,913	-		MPMX19_01528	0.43	-1.9
1,601,913	-		MPMX19_01528	0.43	-1.0
1,601,913	-		MPMX19_01528	0.43	+0.5
1,601,913	-		MPMX19_01528	0.43	-1.1
1,601,913	-		MPMX19_01528	0.43	-0.6
1,601,913	-		MPMX19_01528	0.43	-0.3
1,601,913	-		MPMX19_01528	0.43	-1.2
1,601,913	-		MPMX19_01528	0.43	+0.0
1,601,913	-		MPMX19_01528	0.43	+0.7
1,601,913	-		MPMX19_01528	0.43	-1.5
1,601,913	-		MPMX19_01528	0.43	-2.2
1,601,913	-		MPMX19_01528	0.43	-1.3
1,601,913	-		MPMX19_01528	0.43	-2.2
1,601,936	+		MPMX19_01528	0.45	-1.2
1,601,936	+		MPMX19_01528	0.45	-1.8
1,601,936	+		MPMX19_01528	0.45	-1.6
1,601,937	-		MPMX19_01528	0.45	+0.0
1,601,937	-		MPMX19_01528	0.45	-1.2
1,602,406	+		MPMX19_01528	0.80	+0.0
1,602,666	+				-0.4
1,602,666	+				-0.8
1,602,702	+				+0.4
1,602,702	+				+0.4
1,602,702	+				+0.6
1,602,702	+				-1.1
1,602,702	+				-2.3
1,602,703	-				-0.4
1,602,703	-				-0.6
1,602,703	-				+0.2
1,602,703	-				-1.0
1,602,721	-		MPMX19_01529	0.12	+0.6
1,603,036	+				+0.2
1,603,036	+				+0.5
1,603,036	+				-0.7
1,603,036	+				+0.6
1,603,036	+				+0.8
1,603,036	+				-1.2
1,603,036	+				-1.6
1,603,036	+				-0.2
1,603,036	+				-0.2
1,603,036	+				-0.2
1,603,036	+				+1.7
1,603,036	+				+0.6
1,603,036	+				+0.9
1,603,036	+				-1.2
1,603,036	+				+0.4
1,603,037	-				-0.6
1,603,037	-				+0.0
1,603,037	-				-0.1
1,603,037	-				+0.1
1,603,037	-				-1.0
1,603,037	-				-0.6
1,603,037	-				-1.0
1,603,037	-				+1.0
1,603,052	+				+1.0
1,603,052	+				+1.3
1,603,052	+				-1.8
1,603,052	+				-0.3
1,603,052	+				-0.6
1,603,052	+				-0.6
1,603,052	+				-1.3
1,603,052	+				-0.6
1,603,052	+				+2.0
1,603,052	+				-0.3
1,603,052	+				-0.4
1,603,052	+				-0.9
1,603,053	-				+0.7
1,603,053	-				+0.4
1,603,053	-				-1.9
1,603,053	-				+1.3
1,603,053	-				-0.8
1,603,053	-				+0.1
1,603,053	-				+0.1
1,603,053	-				+0.0
1,603,053	-				+0.3
1,603,053	-				+0.6
1,603,053	-				+0.0
1,603,053	-				-0.7
1,603,053	-				+0.2
1,603,053	-				-1.0
1,603,053	-				+2.0
1,603,131	+		MPMX19_01530	0.13	+0.0
1,603,131	+		MPMX19_01530	0.13	-0.8
1,603,131	+		MPMX19_01530	0.13	-0.5
1,603,131	+		MPMX19_01530	0.13	-1.3
1,603,132	-		MPMX19_01530	0.14	-1.0
1,603,132	-		MPMX19_01530	0.14	-0.3
1,603,132	-		MPMX19_01530	0.14	+1.0
1,603,132	-		MPMX19_01530	0.14	-0.9
1,603,132	-		MPMX19_01530	0.14	-1.0
1,603,132	-		MPMX19_01530	0.14	-2.0
1,603,132	-		MPMX19_01530	0.14	+0.3
1,603,145	+		MPMX19_01530	0.17	+0.4
1,603,145	+		MPMX19_01530	0.17	-0.6
1,603,145	+		MPMX19_01530	0.17	+1.0
1,603,145	+		MPMX19_01530	0.17	+0.4
1,603,145	+		MPMX19_01530	0.17	+1.6
1,603,146	-		MPMX19_01530	0.18	-0.6
1,603,146	-		MPMX19_01530	0.18	-1.1
1,603,146	-		MPMX19_01530	0.18	-1.0
1,603,146	-		MPMX19_01530	0.18	-0.4
1,603,146	-		MPMX19_01530	0.18	-2.1
1,603,146	-		MPMX19_01530	0.18	-1.3
1,603,146	-		MPMX19_01530	0.18	+0.3
1,603,441	+				+0.0
1,603,441	+				+0.4
1,603,442	-				+1.0
1,603,442	-				+0.8
1,603,442	-				-2.3
1,603,442	-				-0.6
1,603,442	-				+0.3
1,603,442	-				+0.2
1,603,610	+		MPMX19_01531	0.18	+2.4
1,603,610	+		MPMX19_01531	0.18	+0.3
1,603,610	+		MPMX19_01531	0.18	+0.0
1,603,611	-		MPMX19_01531	0.18	-0.7
1,603,611	-		MPMX19_01531	0.18	-0.6
1,603,611	-		MPMX19_01531	0.18	+1.0
1,603,611	-		MPMX19_01531	0.18	+0.0
1,603,637	+		MPMX19_01531	0.22	+0.4
1,603,637	+		MPMX19_01531	0.22	-1.3
1,603,637	+		MPMX19_01531	0.22	-0.6
1,603,637	+		MPMX19_01531	0.22	-1.3
1,603,637	+		MPMX19_01531	0.22	-0.3
1,603,637	+		MPMX19_01531	0.22	+0.4
1,603,637	+		MPMX19_01531	0.22	+0.0
1,603,637	+		MPMX19_01531	0.22	+0.3
1,603,637	+		MPMX19_01531	0.22	+1.0
1,603,637	+		MPMX19_01531	0.22	+1.0
1,603,637	+		MPMX19_01531	0.22	+0.3
1,603,637	+		MPMX19_01531	0.22	+0.3
1,603,637	+		MPMX19_01531	0.22	+2.0
1,603,637	+		MPMX19_01531	0.22	+0.5
1,603,637	+		MPMX19_01531	0.22	+1.4
1,603,637	+		MPMX19_01531	0.22	+0.1
1,603,637	+		MPMX19_01531	0.22	-0.4
1,603,637	+		MPMX19_01531	0.22	-0.3
1,603,637	+		MPMX19_01531	0.22	-1.2
1,603,637	+		MPMX19_01531	0.22	-0.3
1,603,637	+		MPMX19_01531	0.22	-1.0
1,603,637	+		MPMX19_01531	0.22	+0.0
1,603,638	-		MPMX19_01531	0.23	-0.5
1,603,638	-		MPMX19_01531	0.23	+0.6
1,603,638	-		MPMX19_01531	0.23	-0.8
1,603,638	-		MPMX19_01531	0.23	+0.0
1,603,638	-		MPMX19_01531	0.23	+1.0
1,603,638	-		MPMX19_01531	0.23	+0.8
1,603,638	-		MPMX19_01531	0.23	-0.4
1,603,638	-		MPMX19_01531	0.23	-0.4
1,603,638	-		MPMX19_01531	0.23	+0.3
1,603,638	-		MPMX19_01531	0.23	+0.0
1,603,638	-		MPMX19_01531	0.23	-1.2
1,603,638	-		MPMX19_01531	0.23	-0.5
1,603,638	-		MPMX19_01531	0.23	+3.0
1,603,638	-		MPMX19_01531	0.23	+1.0
1,603,638	-		MPMX19_01531	0.23	-0.6