Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01443

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,515,222	-		MPMX19_01442	0.56	-0.6
1,515,233	+		MPMX19_01442	0.57	-0.9
1,515,233	+		MPMX19_01442	0.57	-1.5
1,515,233	+		MPMX19_01442	0.57	-2.1
1,515,234	-		MPMX19_01442	0.57	-1.0
1,515,254	+		MPMX19_01442	0.58	+1.5
1,515,254	+		MPMX19_01442	0.58	-0.3
1,515,254	+		MPMX19_01442	0.58	-0.5
1,515,254	+		MPMX19_01442	0.58	-0.4
1,515,254	+		MPMX19_01442	0.58	-0.5
1,515,254	+		MPMX19_01442	0.58	+0.4
1,515,255	-		MPMX19_01442	0.58	+0.0
1,515,255	-		MPMX19_01442	0.58	-0.2
1,515,255	-		MPMX19_01442	0.58	-0.5
1,515,255	-		MPMX19_01442	0.58	+1.0
1,515,255	-		MPMX19_01442	0.58	-0.5
1,515,255	-		MPMX19_01442	0.58	-0.8
1,515,255	-		MPMX19_01442	0.58	+0.0
1,515,255	-		MPMX19_01442	0.58	-0.9
1,515,255	-		MPMX19_01442	0.58	-0.3
1,515,255	-		MPMX19_01442	0.58	+0.0
1,515,255	-		MPMX19_01442	0.58	-0.5
1,515,270	-		MPMX19_01442	0.59	+0.7
1,515,314	+		MPMX19_01442	0.62	-1.5
1,515,314	+		MPMX19_01442	0.62	+0.5
1,515,314	+		MPMX19_01442	0.62	-2.0
1,515,314	+		MPMX19_01442	0.62	-0.8
1,515,315	-		MPMX19_01442	0.62	+0.0
1,515,315	-		MPMX19_01442	0.62	-0.3
1,515,315	-		MPMX19_01442	0.62	+0.6
1,515,329	+		MPMX19_01442	0.63	+0.0
1,515,329	+		MPMX19_01442	0.63	-0.3
1,515,344	+		MPMX19_01442	0.64	-2.7
1,515,345	-		MPMX19_01442	0.65	-0.8
1,515,359	+		MPMX19_01442	0.65	-0.5
1,515,359	+		MPMX19_01442	0.65	-0.3
1,515,359	+		MPMX19_01442	0.65	-2.5
1,515,360	-		MPMX19_01442	0.66	-1.0
1,515,360	-		MPMX19_01442	0.66	-1.8
1,515,360	-		MPMX19_01442	0.66	-0.3
1,515,360	-		MPMX19_01442	0.66	+0.3
1,515,389	+		MPMX19_01442	0.67	-1.0
1,515,389	+		MPMX19_01442	0.67	-1.8
1,515,389	+		MPMX19_01442	0.67	-0.5
1,515,389	+		MPMX19_01442	0.67	+0.0
1,515,389	+		MPMX19_01442	0.67	-0.2
1,515,389	+		MPMX19_01442	0.67	+0.5
1,515,389	+		MPMX19_01442	0.67	-0.8
1,515,389	+		MPMX19_01442	0.67	-0.2
1,515,389	+		MPMX19_01442	0.67	+0.0
1,515,389	+		MPMX19_01442	0.67	+1.3
1,515,389	+		MPMX19_01442	0.67	+0.6
1,515,389	+		MPMX19_01442	0.67	-1.5
1,515,389	+		MPMX19_01442	0.67	-0.1
1,515,389	+		MPMX19_01442	0.67	+0.5
1,515,389	+		MPMX19_01442	0.67	+0.6
1,515,389	+		MPMX19_01442	0.67	-2.8
1,515,389	+		MPMX19_01442	0.67	-2.0
1,515,389	+		MPMX19_01442	0.67	+0.7
1,515,389	+		MPMX19_01442	0.67	-0.5
1,515,389	+		MPMX19_01442	0.67	-0.5
1,515,389	+		MPMX19_01442	0.67	+1.6
1,515,389	+		MPMX19_01442	0.67	-1.0
1,515,389	+		MPMX19_01442	0.67	-1.0
1,515,389	+		MPMX19_01442	0.67	-2.5
1,515,389	+		MPMX19_01442	0.67	-0.4
1,515,389	+		MPMX19_01442	0.67	+0.1
1,515,389	+		MPMX19_01442	0.67	-0.8
1,515,390	-		MPMX19_01442	0.68	-0.5
1,515,390	-		MPMX19_01442	0.68	-1.0
1,515,390	-		MPMX19_01442	0.68	-2.0
1,515,390	-		MPMX19_01442	0.68	-0.9
1,515,390	-		MPMX19_01442	0.68	-0.5
1,515,390	-		MPMX19_01442	0.68	-1.0
1,515,390	-		MPMX19_01442	0.68	+0.8
1,515,390	-		MPMX19_01442	0.68	+1.5
1,515,390	-		MPMX19_01442	0.68	-1.0
1,515,390	-		MPMX19_01442	0.68	-0.8
1,515,390	-		MPMX19_01442	0.68	-2.3
1,515,390	-		MPMX19_01442	0.68	+2.6
1,515,390	-		MPMX19_01442	0.68	+0.5
1,515,390	-		MPMX19_01442	0.68	+0.2
1,515,390	-		MPMX19_01442	0.68	+0.8
1,515,390	-		MPMX19_01442	0.68	-1.0
1,515,390	-		MPMX19_01442	0.68	-1.0
1,515,390	-		MPMX19_01442	0.68	-0.5
1,515,390	-		MPMX19_01442	0.68	-0.2
1,515,425	+		MPMX19_01442	0.70	+0.5
1,515,425	+		MPMX19_01442	0.70	-1.0
1,515,426	-		MPMX19_01442	0.70	+0.7
1,515,434	+		MPMX19_01442	0.71	+0.7
1,515,434	+		MPMX19_01442	0.71	-1.1
1,515,435	-		MPMX19_01442	0.71	+1.0
1,515,461	+		MPMX19_01442	0.72	-1.5
1,515,462	-		MPMX19_01442	0.72	-1.4
1,515,462	-		MPMX19_01442	0.72	+1.0
1,515,473	+		MPMX19_01442	0.73	-0.3
1,515,473	+		MPMX19_01442	0.73	-0.2
1,515,473	+		MPMX19_01442	0.73	+1.8
1,515,474	-		MPMX19_01442	0.73	-0.5
1,515,474	-		MPMX19_01442	0.73	-0.4
1,515,518	+		MPMX19_01442	0.76	-2.0
1,515,518	+		MPMX19_01442	0.76	+0.0
1,515,518	+		MPMX19_01442	0.76	-0.3
1,515,518	+		MPMX19_01442	0.76	+0.5
1,515,518	+		MPMX19_01442	0.76	-0.5
1,515,518	+		MPMX19_01442	0.76	-1.1
1,515,518	+		MPMX19_01442	0.76	+0.5
1,515,518	+		MPMX19_01442	0.76	-1.0
1,515,519	-		MPMX19_01442	0.76	+1.0
1,515,519	-		MPMX19_01442	0.76	-0.6
1,515,519	-		MPMX19_01442	0.76	-2.4
1,515,519	-		MPMX19_01442	0.76	-1.8
1,515,563	+		MPMX19_01442	0.79	-0.5
1,515,564	-		MPMX19_01442	0.79	-1.3
1,515,564	-		MPMX19_01442	0.79	+0.3
1,515,564	-		MPMX19_01442	0.79	-0.7
1,515,564	-		MPMX19_01442	0.79	+0.3
1,515,564	-		MPMX19_01442	0.79	+0.0
1,515,564	-		MPMX19_01442	0.79	+0.5
1,515,564	-		MPMX19_01442	0.79	-1.0
1,515,674	+		MPMX19_01442	0.87	+0.4
1,515,674	+		MPMX19_01442	0.87	+1.5
1,515,674	+		MPMX19_01442	0.87	-1.0
1,515,674	+		MPMX19_01442	0.87	+0.3
1,515,674	+		MPMX19_01442	0.87	+0.4
1,515,674	+		MPMX19_01442	0.87	+1.0
1,515,674	+		MPMX19_01442	0.87	-0.3
1,515,674	+		MPMX19_01442	0.87	-0.8
1,515,674	+		MPMX19_01442	0.87	+0.4
1,515,674	+		MPMX19_01442	0.87	+0.7
1,515,674	+		MPMX19_01442	0.87	+0.0
1,515,674	+		MPMX19_01442	0.87	-1.5
1,515,674	+		MPMX19_01442	0.87	+1.2
1,515,674	+		MPMX19_01442	0.87	-0.5
1,515,674	+		MPMX19_01442	0.87	-1.3
1,515,674	+		MPMX19_01442	0.87	-1.0
1,515,674	+		MPMX19_01442	0.87	-1.0
1,515,674	+		MPMX19_01442	0.87	-0.6
1,515,674	+		MPMX19_01442	0.87	+1.3
1,515,674	+		MPMX19_01442	0.87	+2.0
1,515,674	+		MPMX19_01442	0.87	-1.8
1,515,674	+		MPMX19_01442	0.87	+0.4
1,515,674	+		MPMX19_01442	0.87	-1.2
1,515,674	+		MPMX19_01442	0.87	-1.4
1,515,674	+		MPMX19_01442	0.87	-0.3
1,515,674	+		MPMX19_01442	0.87	-0.1
1,515,674	+		MPMX19_01442	0.87	-0.8
1,515,675	-		MPMX19_01442	0.87	-0.5
1,515,675	-		MPMX19_01442	0.87	-1.1
1,515,675	-		MPMX19_01442	0.87	-0.9
1,515,675	-		MPMX19_01442	0.87	-0.4
1,515,675	-		MPMX19_01442	0.87	-1.0
1,515,675	-		MPMX19_01442	0.87	+0.3
1,515,675	-		MPMX19_01442	0.87	-0.7
1,515,675	-		MPMX19_01442	0.87	+1.0
1,515,675	-		MPMX19_01442	0.87	-2.0
1,515,675	-		MPMX19_01442	0.87	-0.4
1,515,675	-		MPMX19_01442	0.87	+0.6
1,515,675	-		MPMX19_01442	0.87	+0.5
1,515,675	-		MPMX19_01442	0.87	-1.3
1,515,675	-		MPMX19_01442	0.87	-0.5
1,515,675	-		MPMX19_01442	0.87	-0.3
1,515,675	-		MPMX19_01442	0.87	-0.6
1,515,675	-		MPMX19_01442	0.87	+1.2
1,515,675	-		MPMX19_01442	0.87	+2.5
1,515,675	-		MPMX19_01442	0.87	-0.3
1,515,675	-		MPMX19_01442	0.87	-0.8
1,515,675	-		MPMX19_01442	0.87	-1.8
1,515,675	-		MPMX19_01442	0.87	-1.5
1,515,675	-		MPMX19_01442	0.87	-0.5
1,515,758	+				-1.3
1,515,759	-				+0.5
1,515,759	-				-0.8
1,515,759	-				-0.5
1,515,759	-				+1.0
1,515,759	-				-1.5
1,515,861	-				-0.9
1,516,064	+				+1.0
1,516,064	+				-0.5
1,516,064	+				-0.3
1,516,064	+				+0.5
1,516,064	+				+0.3
1,516,064	+				+0.6
1,516,064	+				-1.3
1,516,065	-				+0.0
1,516,065	-				-1.0
1,516,065	-				-1.3
1,516,065	-				-1.0
1,516,065	-				+0.0
1,516,065	-				+0.0
1,516,065	-				-0.1
1,516,065	-				-0.3
1,516,065	-				-1.4
1,516,065	-				-1.0
1,516,139	-				+0.7
1,516,139	-				+1.3
1,516,207	+		MPMX19_01443	0.17	-1.1
1,516,207	+		MPMX19_01443	0.17	+0.0
1,516,207	+		MPMX19_01443	0.17	-1.4
1,516,207	+		MPMX19_01443	0.17	+0.0
1,516,207	+		MPMX19_01443	0.17	+0.6
1,516,207	+		MPMX19_01443	0.17	+1.0
1,516,207	+		MPMX19_01443	0.17	+0.0
1,516,208	-		MPMX19_01443	0.18	-2.7
1,516,208	-		MPMX19_01443	0.18	+1.0
1,516,208	-		MPMX19_01443	0.18	+1.0
1,516,208	-		MPMX19_01443	0.18	-1.1
1,516,208	-		MPMX19_01443	0.18	+0.0
1,516,208	-		MPMX19_01443	0.18	-1.2
1,516,208	-		MPMX19_01443	0.18	-0.8
1,516,208	-		MPMX19_01443	0.18	+0.0
1,516,208	-		MPMX19_01443	0.18	-2.0
1,516,208	-		MPMX19_01443	0.18	-0.2
1,516,208	-		MPMX19_01443	0.18	+0.0
1,516,252	+		MPMX19_01443	0.29	+0.3
1,516,252	+		MPMX19_01443	0.29	+1.0
1,516,253	-		MPMX19_01443	0.29	-2.4
1,516,253	-		MPMX19_01443	0.29	-0.5
1,516,253	-		MPMX19_01443	0.29	-0.2
1,516,253	-		MPMX19_01443	0.29	-0.5
1,516,253	-		MPMX19_01443	0.29	+0.0
1,516,253	-		MPMX19_01443	0.29	-0.5
1,516,253	-		MPMX19_01443	0.29	-1.5
1,516,253	-		MPMX19_01443	0.29	-0.3
1,516,253	-		MPMX19_01443	0.29	-1.5
1,516,253	-		MPMX19_01443	0.29	-0.5
1,516,462	+		MPMX19_01443	0.81	-1.5
1,516,462	+		MPMX19_01443	0.81	-1.4
1,516,462	+		MPMX19_01443	0.81	+0.5
1,516,463	-		MPMX19_01443	0.81	-1.3
1,516,463	-		MPMX19_01443	0.81	+0.0
1,516,598	+				+0.5
1,516,598	+				+0.5
1,516,598	+				-1.3
1,516,598	+				-0.5
1,516,598	+				-1.8
1,516,598	+				+0.6
1,516,599	-				+0.6
1,516,599	-				-0.4
1,516,599	-				-0.8
1,516,599	-				-0.1
1,516,599	-				-0.1
1,516,599	-				+0.2
1,516,599	-				+0.4
1,516,599	-				-1.0
1,516,599	-				-0.6
1,516,794	+		MPMX19_01444	0.52	-1.5
1,516,794	+		MPMX19_01444	0.52	-1.0
1,516,794	+		MPMX19_01444	0.52	-1.0
1,516,794	+		MPMX19_01444	0.52	+1.0
1,516,794	+		MPMX19_01444	0.52	-0.5
1,516,794	+		MPMX19_01444	0.52	+0.6
1,516,794	+		MPMX19_01444	0.52	-1.8
1,516,794	+		MPMX19_01444	0.52	-0.4
1,516,794	+		MPMX19_01444	0.52	-1.5
1,516,794	+		MPMX19_01444	0.52	+0.0
1,516,794	+		MPMX19_01444	0.52	-1.1
1,516,794	+		MPMX19_01444	0.52	-0.5
1,516,794	+		MPMX19_01444	0.52	-0.9
1,516,794	+		MPMX19_01444	0.52	+0.5
1,516,794	+		MPMX19_01444	0.52	-0.2
1,516,794	+		MPMX19_01444	0.52	-1.0
1,516,794	+		MPMX19_01444	0.52	+0.4
1,516,794	+		MPMX19_01444	0.52	-1.0
1,516,794	+		MPMX19_01444	0.52	-1.1
1,516,794	+		MPMX19_01444	0.52	+1.0
1,516,794	+		MPMX19_01444	0.52	-0.3
1,516,794	+		MPMX19_01444	0.52	-0.8
1,516,794	+		MPMX19_01444	0.52	-1.4
1,516,794	+		MPMX19_01444	0.52	+0.2
1,516,794	+		MPMX19_01444	0.52	+0.0
1,516,794	+		MPMX19_01444	0.52	+0.0
1,516,794	+		MPMX19_01444	0.52	-0.5
1,516,795	-		MPMX19_01444	0.52	+1.5
1,516,795	-		MPMX19_01444	0.52	+1.6
1,516,795	-		MPMX19_01444	0.52	-0.4
1,516,795	-		MPMX19_01444	0.52	-1.0
1,516,795	-		MPMX19_01444	0.52	+0.6
1,516,795	-		MPMX19_01444	0.52	-1.3
1,516,795	-		MPMX19_01444	0.52	-2.0
1,516,795	-		MPMX19_01444	0.52	-1.3
1,516,795	-		MPMX19_01444	0.52	+1.0
1,516,795	-		MPMX19_01444	0.52	+1.0
1,516,795	-		MPMX19_01444	0.52	-0.7
1,516,948	+				+0.5
1,516,948	+				-1.0
1,516,948	+				-1.3
1,516,948	+				-0.4
1,516,949	-				-1.3
1,516,984	+				+0.7
1,516,985	-				-1.5
1,516,985	-				-0.2
1,516,986	+				+0.2
1,516,986	+				+1.0
1,516,986	+				-1.9
1,516,986	+				+0.5
1,516,986	+				+0.0
1,516,986	+				+1.8
1,516,986	+				+0.5
1,516,986	+				+0.3
1,516,986	+				-0.7
1,516,986	+				+1.0
1,516,986	+				-0.8
1,516,986	+				-1.1
1,516,986	+				+0.5
1,516,986	+				+0.5
1,516,986	+				+0.8
1,516,986	+				+0.3
1,516,986	+				-0.5
1,516,986	+				-0.0
1,516,986	+				-0.0
1,516,986	+				+0.0
1,516,986	+				+0.5
1,516,986	+				-1.3
1,516,986	+				-1.7
1,516,986	+				-1.2
1,516,986	+				+0.5
1,516,986	+				-0.7
1,516,986	+				+0.0
1,516,986	+				-0.3
1,516,986	+				-1.8
1,516,986	+				+0.6
1,516,986	+				+0.3
1,516,986	+				+0.3
1,516,986	+				+0.3
1,516,986	+				+0.0
1,516,986	+				-0.8
1,516,986	+				+0.3
1,516,986	+				-2.3
1,516,986	+				+2.0
1,516,986	+				-0.5
1,516,986	+				+0.0
1,516,986	+				-2.1
1,516,986	+				-1.3
1,516,986	+				-0.4
1,516,986	+				+2.0
1,516,986	+				-0.3
1,516,986	+				-1.0
1,516,986	+				-0.5
1,516,986	+				+0.7
1,516,986	+				-0.8
1,516,986	+				-0.7
1,516,986	+				+0.6
1,516,986	+				-0.9
1,516,986	+				-2.3
1,516,986	+				-1.3
1,516,986	+				-1.4
1,516,986	+				-0.5
1,516,986	+				-0.5
1,516,986	+				-1.5
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1,516,986	+				+2.4
1,516,986	+				-1.5
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1,516,987	-				-0.5
1,516,987	-				-1.1
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1,516,987	-				-1.3
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1,516,987	-				-1.3
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1,516,987	-				+0.6
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1,516,987	-				-0.5
1,516,987	-				-1.3
1,516,987	-				+2.0
1,516,987	-				-1.7
1,516,987	-				+1.5
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1,516,987	-				-2.9
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1,516,987	-				-0.6
1,516,987	-				-2.0
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1,516,987	-				-0.9
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1,516,987	-				-1.5
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1,517,074	-				+0.5
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1,517,074	-				-0.8
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1,517,074	-				-0.2
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1,517,074	-				-0.9
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1,517,074	-				-0.1
1,517,074	-				-0.2
1,517,074	-				-2.3
1,517,074	-				-0.8
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1,517,271	+		MPMX19_01445	0.22	+0.3
1,517,406	+		MPMX19_01445	0.52	+1.0
1,517,406	+		MPMX19_01445	0.52	+0.5
1,517,407	-		MPMX19_01445	0.52	+0.6
1,517,526	+		MPMX19_01445	0.79	-0.5
1,517,526	+		MPMX19_01445	0.79	-0.1
1,517,526	+		MPMX19_01445	0.79	+0.0
1,517,527	-		MPMX19_01445	0.80	+0.0
1,517,527	-		MPMX19_01445	0.80	+0.0