Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01048

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,087,743	+				+0.3
1,087,743	+				+2.1
1,087,743	+				+0.1
1,087,743	+				-0.1
1,087,743	+				+0.3
1,087,744	-				+1.6
1,087,744	-				-0.3
1,087,744	-				+0.1
1,087,761	-				+0.1
1,087,761	-				+0.4
1,087,776	+				-0.2
1,087,776	+				-0.7
1,087,776	+				-0.5
1,087,776	+				+0.8
1,087,776	+				-0.9
1,087,787	+				+1.6
1,087,788	-				-0.3
1,087,788	-				+0.8
1,087,852	+				+0.1
1,087,852	+				-1.9
1,087,852	+				-0.9
1,087,853	-				-0.2
1,087,854	+				-0.7
1,087,854	+				-2.0
1,087,906	+				-0.5
1,087,907	-				+0.1
1,087,936	-				+0.7
1,087,936	-				+0.7
1,087,974	+				-0.3
1,087,974	+				-0.2
1,087,974	+				-0.5
1,087,975	-				-2.1
1,087,975	-				-0.8
1,087,975	-				-0.4
1,087,975	-				-0.9
1,087,995	+				+0.8
1,088,061	+				-0.5
1,088,061	+				-0.5
1,088,061	+				-0.3
1,088,062	-				+0.7
1,088,062	-				-1.7
1,088,062	-				-0.9
1,088,062	-				+1.1
1,088,062	-				-1.5
1,088,086	+				-0.6
1,088,086	+				-0.3
1,088,086	+				-0.5
1,088,086	+				-0.9
1,088,086	+				-0.7
1,088,087	-				+1.3
1,088,087	-				-2.5
1,088,087	-				+0.3
1,088,087	-				-0.1
1,088,087	-				-0.3
1,088,087	-				+1.1
1,088,087	-				+0.1
1,088,087	-				-1.4
1,088,087	-				-0.1
1,088,113	-				-0.6
1,088,123	+				+0.4
1,088,123	+				+0.7
1,088,123	+				-0.3
1,088,123	+				-1.3
1,088,123	+				-0.5
1,088,123	+				-2.3
1,088,123	+				-0.4
1,088,124	-				-1.2
1,088,124	-				+0.3
1,088,124	-				+0.1
1,088,124	-				-1.5
1,088,124	-				-2.2
1,088,124	-				-0.4
1,088,166	+				+1.1
1,088,296	-				+0.6
1,088,361	+		MPMX19_01047	0.16	-0.7
1,088,361	+		MPMX19_01047	0.16	-0.5
1,088,361	+		MPMX19_01047	0.16	-0.5
1,088,361	+		MPMX19_01047	0.16	+0.7
1,088,361	+		MPMX19_01047	0.16	+0.7
1,088,361	+		MPMX19_01047	0.16	-1.5
1,088,362	-		MPMX19_01047	0.17	+0.3
1,088,362	-		MPMX19_01047	0.17	+0.2
1,088,362	-		MPMX19_01047	0.17	+1.1
1,088,362	-		MPMX19_01047	0.17	+0.2
1,088,362	-		MPMX19_01047	0.17	+1.1
1,088,383	-		MPMX19_01047	0.22	+1.5
1,088,433	+		MPMX19_01047	0.34	-0.5
1,088,433	+		MPMX19_01047	0.34	-2.1
1,088,434	-		MPMX19_01047	0.34	+1.1
1,088,649	+		MPMX19_01047	0.86	-1.7
1,088,649	+		MPMX19_01047	0.86	-0.5
1,089,058	-				-1.5
1,089,058	-				+0.3
1,089,058	-				-0.9
1,089,058	-				+0.3
1,089,164	+				+0.8
1,089,164	+				+1.1
1,089,165	-				+0.1
1,089,165	-				-0.3
1,089,309	-				-1.5
1,089,309	-				+0.6
1,089,446	+				-0.5
1,089,446	+				-1.8
1,089,446	+				+1.4
1,089,447	-				-0.7
1,089,447	-				-1.0
1,089,447	-				-0.3
1,089,447	-				-2.7
1,089,447	-				+0.3
1,089,514	+				-1.3
1,089,514	+				-0.1
1,089,514	+				-0.1
1,089,514	+				-1.5
1,089,514	+				+0.1
1,089,514	+				-0.9
1,089,515	-				-0.2
1,089,515	-				-0.2
1,089,515	-				-0.7
1,089,515	-				+0.5
1,089,618	+		MPMX19_01049	0.17	+0.6
1,089,618	+		MPMX19_01049	0.17	-0.5
1,089,618	+		MPMX19_01049	0.17	+0.8
1,089,618	+		MPMX19_01049	0.17	-0.7
1,089,618	+		MPMX19_01049	0.17	-0.6
1,089,618	+		MPMX19_01049	0.17	-0.3
1,089,618	+		MPMX19_01049	0.17	+0.7
1,089,618	+		MPMX19_01049	0.17	-0.4
1,089,618	+		MPMX19_01049	0.17	-2.4
1,089,618	+		MPMX19_01049	0.17	-0.1
1,089,618	+		MPMX19_01049	0.17	-0.7
1,089,618	+		MPMX19_01049	0.17	-0.9
1,089,618	+		MPMX19_01049	0.17	-1.3
1,089,618	+		MPMX19_01049	0.17	-0.1
1,089,618	+		MPMX19_01049	0.17	-0.7
1,089,618	+		MPMX19_01049	0.17	-0.2
1,089,618	+		MPMX19_01049	0.17	-0.1
1,089,619	-		MPMX19_01049	0.17	-1.1
1,089,619	-		MPMX19_01049	0.17	+0.4
1,089,619	-		MPMX19_01049	0.17	-1.3
1,089,619	-		MPMX19_01049	0.17	-0.7
1,089,619	-		MPMX19_01049	0.17	-2.4
1,089,619	-		MPMX19_01049	0.17	+0.5
1,089,619	-		MPMX19_01049	0.17	-0.3
1,089,619	-		MPMX19_01049	0.17	-0.9
1,089,619	-		MPMX19_01049	0.17	-0.1
1,089,619	-		MPMX19_01049	0.17	-1.3
1,089,619	-		MPMX19_01049	0.17	+0.3
1,089,619	-		MPMX19_01049	0.17	-0.4
1,089,619	-		MPMX19_01049	0.17	-0.2
1,089,619	-		MPMX19_01049	0.17	-0.4
1,089,619	-		MPMX19_01049	0.17	-0.4
1,089,687	+		MPMX19_01049	0.24	+0.5
1,089,687	+		MPMX19_01049	0.24	-1.5
1,089,687	+		MPMX19_01049	0.24	+0.6
1,089,687	+		MPMX19_01049	0.24	-0.2
1,089,687	+		MPMX19_01049	0.24	-0.3
1,089,688	-		MPMX19_01049	0.24	-1.3
1,089,688	-		MPMX19_01049	0.24	-1.7
1,089,688	-		MPMX19_01049	0.24	-1.1
1,089,688	-		MPMX19_01049	0.24	-0.5
1,089,688	-		MPMX19_01049	0.24	-1.3
1,089,688	-		MPMX19_01049	0.24	-0.0
1,089,688	-		MPMX19_01049	0.24	-0.5
1,089,690	+		MPMX19_01049	0.24	-0.3
1,089,690	+		MPMX19_01049	0.24	+0.3
1,089,690	+		MPMX19_01049	0.24	-2.6
1,089,690	+		MPMX19_01049	0.24	+0.1
1,089,690	+		MPMX19_01049	0.24	-0.9
1,089,690	+		MPMX19_01049	0.24	+0.3
1,089,690	+		MPMX19_01049	0.24	-0.3
1,089,690	+		MPMX19_01049	0.24	+1.1
1,089,690	+		MPMX19_01049	0.24	-1.3
1,089,690	+		MPMX19_01049	0.24	-1.5
1,089,690	+		MPMX19_01049	0.24	-1.7
1,089,690	+		MPMX19_01049	0.24	-1.0
1,089,690	+		MPMX19_01049	0.24	-1.1
1,089,691	-		MPMX19_01049	0.24	-1.3
1,089,691	-		MPMX19_01049	0.24	-1.3
1,089,691	-		MPMX19_01049	0.24	-0.0
1,089,691	-		MPMX19_01049	0.24	-0.7
1,089,691	-		MPMX19_01049	0.24	-2.1
1,089,691	-		MPMX19_01049	0.24	-0.0
1,089,691	-		MPMX19_01049	0.24	-1.1
1,089,691	-		MPMX19_01049	0.24	-0.8
1,089,691	-		MPMX19_01049	0.24	-2.9
1,089,691	-		MPMX19_01049	0.24	+0.3
1,089,742	+		MPMX19_01049	0.29	-1.5
1,089,742	+		MPMX19_01049	0.29	-0.5
1,089,742	+		MPMX19_01049	0.29	-0.9
1,089,742	+		MPMX19_01049	0.29	+0.1
1,089,742	+		MPMX19_01049	0.29	-0.1
1,089,742	+		MPMX19_01049	0.29	-0.9
1,089,742	+		MPMX19_01049	0.29	+0.1
1,089,743	-		MPMX19_01049	0.30	-0.4
1,089,759	+		MPMX19_01049	0.31	-1.5
1,089,759	+		MPMX19_01049	0.31	-1.6
1,089,760	-		MPMX19_01049	0.31	+0.1
1,089,760	-		MPMX19_01049	0.31	+0.2
1,089,760	-		MPMX19_01049	0.31	-0.3
1,089,873	+		MPMX19_01049	0.43	+0.5
1,089,885	+		MPMX19_01049	0.44	-0.2
1,089,885	+		MPMX19_01049	0.44	-0.5
1,089,885	+		MPMX19_01049	0.44	-0.2
1,089,885	+		MPMX19_01049	0.44	-0.6
1,089,885	+		MPMX19_01049	0.44	-1.5
1,089,885	+		MPMX19_01049	0.44	-0.9
1,089,885	+		MPMX19_01049	0.44	+0.7
1,089,885	+		MPMX19_01049	0.44	+0.1
1,089,885	+		MPMX19_01049	0.44	-1.7
1,089,885	+		MPMX19_01049	0.44	-1.9
1,089,886	-		MPMX19_01049	0.44	+0.1
1,089,886	-		MPMX19_01049	0.44	+1.3
1,089,886	-		MPMX19_01049	0.44	+0.5
1,089,886	-		MPMX19_01049	0.44	-0.4
1,089,886	-		MPMX19_01049	0.44	-0.5
1,089,886	-		MPMX19_01049	0.44	-0.6
1,089,886	-		MPMX19_01049	0.44	-0.5
1,089,886	-		MPMX19_01049	0.44	-1.3
1,089,886	-		MPMX19_01049	0.44	-0.3
1,089,886	-		MPMX19_01049	0.44	-0.8
1,089,886	-		MPMX19_01049	0.44	-0.5
1,089,886	-		MPMX19_01049	0.44	-0.7