Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00729 and MPMX19_00730 are separated by 244 nucleotides MPMX19_00730 and MPMX19_00731 are separated by 91 nucleotides MPMX19_00731 and MPMX19_00732 are separated by 172 nucleotides MPMX19_00732 and MPMX19_00733 are separated by 35 nucleotides
MPMX19_00729: MPMX19_00729 - K(+)-insensitive pyrophosphate-energized proton pump, at 750,386 to 752,488
_00729
MPMX19_00730: MPMX19_00730 - hypothetical protein, at 752,733 to 753,191
_00730
MPMX19_00731: MPMX19_00731 - Thiamine-monophosphate kinase, at 753,283 to 754,275
_00731
MPMX19_00732: MPMX19_00732 - Transcription antitermination protein NusB, at 754,448 to 755,035
_00732
MPMX19_00733: MPMX19_00733 - 6,7-dimethyl-8-ribityllumazine synthase 1, at 755,071 to 755,535
_00733
Position (kb) 753
754
755 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.340 kb on + strand at 752.340 kb on + strand at 752.341 kb on - strand at 752.425 kb on + strand at 752.437 kb on - strand at 752.437 kb on - strand at 752.437 kb on - strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.481 kb on - strand at 752.481 kb on - strand at 752.508 kb on + strand at 752.508 kb on + strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.574 kb on - strand at 752.656 kb on + strand at 752.669 kb on + strand at 752.675 kb on + strand at 752.675 kb on + strand at 752.686 kb on + strand at 752.686 kb on + strand at 752.686 kb on + strand at 752.773 kb on + strand at 752.773 kb on + strand at 752.773 kb on + strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.837 kb on + strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.115 kb on + strand, within MPMX19_00730 at 753.115 kb on + strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.205 kb on - strand at 753.205 kb on - strand at 753.256 kb on + strand at 753.256 kb on + strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 754.450 kb on - strand at 754.450 kb on - strand at 754.450 kb on - strand at 754.450 kb on - strand at 755.146 kb on - strand, within MPMX19_00733 at 755.228 kb on + strand, within MPMX19_00733 at 755.228 kb on + strand, within MPMX19_00733 at 755.229 kb on - strand, within MPMX19_00733 at 755.229 kb on - strand, within MPMX19_00733 at 755.229 kb on - strand, within MPMX19_00733
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 752,325 + -0.3 752,325 + -1.1 752,325 + -0.4 752,325 + -1.5 752,325 + -0.0 752,325 + -1.6 752,325 + -1.3 752,325 + -2.0 752,325 + +1.0 752,325 + +0.6 752,325 + -0.7 752,325 + -1.3 752,325 + -0.6 752,325 + -1.0 752,325 + -0.8 752,325 + +0.6 752,325 + -1.3 752,325 + -0.8 752,325 + -0.4 752,325 + -1.0 752,325 + +1.0 752,326 - -0.2 752,326 - -1.0 752,326 - -0.3 752,326 - -0.6 752,326 - -0.0 752,326 - -0.4 752,326 - +1.0 752,326 - +0.6 752,326 - -0.6 752,326 - -0.0 752,326 - +1.0 752,326 - -1.2 752,326 - -1.0 752,326 - -1.4 752,326 - -0.3 752,340 + +0.4 752,340 + -0.0 752,341 - +1.3 752,425 + -2.0 752,437 - -1.0 752,437 - -0.5 752,437 - -1.8 752,480 + -1.0 752,480 + +0.5 752,480 + -0.8 752,480 + -0.3 752,481 - +1.0 752,481 - -0.8 752,508 + -0.0 752,508 + -0.4 752,509 - +0.4 752,509 - +0.3 752,509 - -2.7 752,509 - -0.4 752,509 - -0.3 752,573 + -1.0 752,573 + -1.7 752,573 + -2.7 752,573 + -1.3 752,573 + -1.3 752,574 - -0.2 752,656 + -1.4 752,669 + -0.8 752,675 + -1.0 752,675 + -0.9 752,686 + -0.6 752,686 + -1.8 752,686 + +0.4 752,773 + -2.5 752,773 + -0.9 752,773 + -0.6 752,774 - +1.0 752,774 - -1.3 752,774 - +1.0 752,774 - +0.2 752,774 - -2.8 752,774 - -0.6 752,837 + MPMX19_00730 0.23 -0.0 752,838 - MPMX19_00730 0.23 -1.6 752,838 - MPMX19_00730 0.23 -0.3 752,838 - MPMX19_00730 0.23 +0.6 752,838 - MPMX19_00730 0.23 -1.1 752,838 - MPMX19_00730 0.23 -0.2 752,838 - MPMX19_00730 0.23 -0.0 752,838 - MPMX19_00730 0.23 -1.6 752,885 - MPMX19_00730 0.33 -1.2 752,885 - MPMX19_00730 0.33 -1.3 752,885 - MPMX19_00730 0.33 -0.8 753,106 + MPMX19_00730 0.81 +0.3 753,106 + MPMX19_00730 0.81 -2.0 753,106 + MPMX19_00730 0.81 -2.0 753,106 + MPMX19_00730 0.81 -2.5 753,106 + MPMX19_00730 0.81 +0.3 753,106 + MPMX19_00730 0.81 -0.1 753,107 - MPMX19_00730 0.81 +1.4 753,107 - MPMX19_00730 0.81 -1.1 753,107 - MPMX19_00730 0.81 -0.3 753,107 - MPMX19_00730 0.81 -2.0 753,107 - MPMX19_00730 0.81 -1.4 753,107 - MPMX19_00730 0.81 -1.1 753,115 + MPMX19_00730 0.83 +0.4 753,115 + MPMX19_00730 0.83 -0.4 753,116 - MPMX19_00730 0.83 -0.6 753,116 - MPMX19_00730 0.83 -0.2 753,116 - MPMX19_00730 0.83 -1.3 753,204 + -0.9 753,204 + +0.3 753,204 + -0.6 753,204 + +0.3 753,204 + -2.6 753,204 + -2.2 753,205 - -1.3 753,205 - -0.9 753,256 + +0.4 753,256 + -0.2 753,257 - -1.0 753,257 - -1.9 753,257 - -1.0 753,257 - -3.2 753,257 - -0.1 753,257 - -1.6 754,450 - -1.6 754,450 - +0.5 754,450 - +1.0 754,450 - +0.2 755,146 - MPMX19_00733 0.16 -0.8 755,228 + MPMX19_00733 0.34 -0.6 755,228 + MPMX19_00733 0.34 -0.0 755,229 - MPMX19_00733 0.34 +0.7 755,229 - MPMX19_00733 0.34 -0.0 755,229 - MPMX19_00733 0.34 -1.3
Or see this region's nucleotide sequence