Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00072

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF_with_fullN
				remove
75,492	+	MPMX19_00071	0.68	-1.3
75,493	-	MPMX19_00071	0.68	-2.7
75,493	-	MPMX19_00071	0.68	+0.9
75,764	+	MPMX19_00071	0.77	+0.9
75,764	+	MPMX19_00071	0.77	+0.2
75,764	+	MPMX19_00071	0.77	-0.1
75,764	+	MPMX19_00071	0.77	-1.2
75,764	+	MPMX19_00071	0.77	+0.9
75,764	+	MPMX19_00071	0.77	-0.1
75,765	-	MPMX19_00071	0.77	-0.4
75,765	-	MPMX19_00071	0.77	-0.4
75,765	-	MPMX19_00071	0.77	-0.2
75,765	-	MPMX19_00071	0.77	-0.5
75,884	+	MPMX19_00071	0.82	-0.5
75,884	+	MPMX19_00071	0.82	-0.9
75,884	+	MPMX19_00071	0.82	-0.9
75,884	+	MPMX19_00071	0.82	-0.5
75,884	+	MPMX19_00071	0.82	-0.1
75,884	+	MPMX19_00071	0.82	-0.1
75,884	+	MPMX19_00071	0.82	-0.5
75,884	+	MPMX19_00071	0.82	+0.1
75,884	+	MPMX19_00071	0.82	-0.6
75,885	-	MPMX19_00071	0.82	-1.8
75,885	-	MPMX19_00071	0.82	+0.0
75,885	-	MPMX19_00071	0.82	-3.0
75,885	-	MPMX19_00071	0.82	-1.0
75,885	-	MPMX19_00071	0.82	-0.4
75,885	-	MPMX19_00071	0.82	-1.2
75,885	-	MPMX19_00071	0.82	+0.3
75,885	-	MPMX19_00071	0.82	-1.3
75,885	-	MPMX19_00071	0.82	-0.3
75,885	-	MPMX19_00071	0.82	-0.4
75,885	-	MPMX19_00071	0.82	+0.0
75,885	-	MPMX19_00071	0.82	+0.9
75,885	-	MPMX19_00071	0.82	+0.3
75,885	-	MPMX19_00071	0.82	-0.1
75,885	-	MPMX19_00071	0.82	+0.5
75,912	-	MPMX19_00071	0.83	-1.5
75,912	-	MPMX19_00071	0.83	-0.1
76,066	+	MPMX19_00071	0.88	+0.2
76,066	+	MPMX19_00071	0.88	+0.6
76,066	+	MPMX19_00071	0.88	-0.5
76,066	+	MPMX19_00071	0.88	-0.1
76,067	-	MPMX19_00071	0.88	-1.1
76,298	+			+0.2
76,298	+			-0.2
76,299	-			+0.9
76,299	-			-1.3
76,326	+			-1.1
76,326	+			-0.1
76,326	+			-0.5
76,326	+			-1.1
76,326	+			+0.1
76,326	+			+0.4
76,326	+			-1.9
76,326	+			+0.3
76,326	+			-0.7
76,326	+			+0.9
76,327	-			-0.1
76,327	-			-0.1
76,327	-			-0.1
76,327	-			-1.7
76,327	-			+0.4
76,327	-			-1.4
76,327	-			-0.9
76,400	+			-1.2
76,400	+			+0.6
76,400	+			-1.0
76,400	+			-0.3
76,401	-			-0.1
76,401	-			-0.9
76,401	-			-0.7
76,401	-			-0.9
76,401	-			-1.1
76,401	-			-0.7
76,401	-			+0.7
76,428	+			-0.1
76,428	+			-0.4
76,428	+			-0.9
76,428	+			+0.4
76,428	+			+0.7
76,429	-			-1.5
76,429	-			+0.2
76,429	-			-1.0
76,429	-			+0.4
76,429	-			+1.5
76,429	-			-1.9
76,429	-			-0.1
76,429	-			+1.3
76,429	-			-0.9
76,429	-			-0.8
76,499	+			-0.8
76,499	+			-1.1
76,499	+			+2.2
76,499	+			-0.4
76,499	+			-0.5
76,499	+			+2.5
76,499	+			-1.7
76,499	+			-0.1
76,499	+			-0.3
76,499	+			+1.1
76,499	+			+0.3
76,499	+			-1.4
76,499	+			-1.2
76,499	+			-0.7
76,499	+			-0.3
76,499	+			-1.1
76,499	+			-1.5
76,499	+			-0.4
76,499	+			-1.0
76,499	+			+0.9
76,499	+			-1.7
76,499	+			+1.4
76,499	+			-0.7
76,499	+			+0.6
76,499	+			-2.2
76,499	+			+0.2
76,499	+			-0.5
76,499	+			+0.1
76,499	+			-0.4
76,499	+			-0.9
76,499	+			+0.3
76,499	+			-1.7
76,500	-			-1.2
76,500	-			+0.3
76,500	-			+0.7
76,500	-			-1.1
76,500	-			-0.8
76,500	-			-0.9
76,500	-			-0.1
76,500	-			-1.4
76,500	-			-2.2
76,500	-			-1.5
76,500	-			+0.0
76,500	-			-0.2
76,500	-			+1.3
76,500	-			-1.2
76,500	-			+0.9
76,500	-			-2.0
76,500	-			-1.7
76,500	-			+0.5
76,500	-			+0.3
76,500	-			-1.1
76,500	-			+0.8
76,500	-			-2.5
76,500	-			+2.9
76,500	-			+0.9
76,500	-			-0.7
76,500	-			+0.2
76,500	-			+0.4
76,500	-			+0.8
76,500	-			-1.4
76,500	-			+0.2
76,500	-			-1.0
76,500	-			+0.5
76,500	-			-2.5
76,500	-			-0.6
76,500	-			+0.4
76,500	-			-0.1
76,500	-			-1.0
76,500	-			-1.2
76,500	-			-1.4
76,500	-			-1.1
76,556	+	MPMX19_00072	0.11	+0.0
76,556	+	MPMX19_00072	0.11	-0.2
76,556	+	MPMX19_00072	0.11	-1.9
76,556	+	MPMX19_00072	0.11	+0.9
76,556	+	MPMX19_00072	0.11	-1.7
76,556	+	MPMX19_00072	0.11	-1.1
76,556	+	MPMX19_00072	0.11	-0.2
76,556	+	MPMX19_00072	0.11	+0.3
76,556	+	MPMX19_00072	0.11	+0.3
76,556	+	MPMX19_00072	0.11	+1.2
76,556	+	MPMX19_00072	0.11	-1.1
76,556	+	MPMX19_00072	0.11	-0.7
76,556	+	MPMX19_00072	0.11	-0.2
76,556	+	MPMX19_00072	0.11	+0.9
76,556	+	MPMX19_00072	0.11	+0.9
76,556	+	MPMX19_00072	0.11	+0.6
76,556	+	MPMX19_00072	0.11	-0.8
76,557	-	MPMX19_00072	0.11	-0.9
76,557	-	MPMX19_00072	0.11	-0.8
76,557	-	MPMX19_00072	0.11	-0.1
76,557	-	MPMX19_00072	0.11	+0.1
76,557	-	MPMX19_00072	0.11	-1.4
76,557	-	MPMX19_00072	0.11	+0.3
76,557	-	MPMX19_00072	0.11	-0.2
76,557	-	MPMX19_00072	0.11	-0.7
76,557	-	MPMX19_00072	0.11	-0.8
76,557	-	MPMX19_00072	0.11	-1.9
76,557	-	MPMX19_00072	0.11	-0.1
76,557	-	MPMX19_00072	0.11	-1.1
76,557	-	MPMX19_00072	0.11	-1.2
76,557	-	MPMX19_00072	0.11	-1.4
76,557	-	MPMX19_00072	0.11	-0.4
76,557	-	MPMX19_00072	0.11	-1.1
76,562	+	MPMX19_00072	0.12	-1.9
76,563	-	MPMX19_00072	0.12	-0.9
76,563	-	MPMX19_00072	0.12	-0.3
76,563	-	MPMX19_00072	0.12	+0.3
76,563	-	MPMX19_00072	0.12	-0.9
76,563	-	MPMX19_00072	0.12	-1.4
76,778	+	MPMX19_00072	0.41	-1.4
76,778	+	MPMX19_00072	0.41	-0.5
76,778	+	MPMX19_00072	0.41	-0.2
76,778	+	MPMX19_00072	0.41	+0.5
76,778	+	MPMX19_00072	0.41	-1.2
76,778	+	MPMX19_00072	0.41	+0.7
76,778	+	MPMX19_00072	0.41	-1.4
76,778	+	MPMX19_00072	0.41	+1.1
76,778	+	MPMX19_00072	0.41	-1.4
76,778	+	MPMX19_00072	0.41	-0.7
76,778	+	MPMX19_00072	0.41	-1.7
76,779	-	MPMX19_00072	0.42	-1.0
76,779	-	MPMX19_00072	0.42	-1.4
76,779	-	MPMX19_00072	0.42	+0.1
76,779	-	MPMX19_00072	0.42	-1.4
76,779	-	MPMX19_00072	0.42	+0.9
76,779	-	MPMX19_00072	0.42	-0.1
76,779	-	MPMX19_00072	0.42	-0.8
76,779	-	MPMX19_00072	0.42	+0.9
76,779	-	MPMX19_00072	0.42	-1.4
77,100	+	MPMX19_00072	0.86	-0.4
77,100	+	MPMX19_00072	0.86	-0.1
77,100	+	MPMX19_00072	0.86	-0.9
77,100	+	MPMX19_00072	0.86	-1.3
77,101	-	MPMX19_00072	0.86	+0.3
77,101	-	MPMX19_00072	0.86	-1.6
77,101	-	MPMX19_00072	0.86	-0.1
77,101	-	MPMX19_00072	0.86	+0.9
77,101	-	MPMX19_00072	0.86	-0.2
77,101	-	MPMX19_00072	0.86	-1.9
77,153	+			+0.5
77,153	+			-0.1
77,153	+			+0.6
77,153	+			+0.1
77,153	+			-0.9
77,154	-			-1.9
77,154	-			-0.5
77,154	-			-1.9
77,154	-			-1.4
77,165	+			-0.2
77,165	+			+0.2
77,166	-			-0.4
77,166	-			+0.3
77,241	+			+0.2
77,241	+			+0.3
77,242	-			+0.5
77,242	-			+0.4
77,242	-			-0.4
77,254	+			+1.3
77,254	+			-0.9
77,255	-			-0.2
77,255	-			-0.8
77,255	-			-0.5
77,255	-			+0.7
77,287	+			-0.8
77,287	+			-0.9
77,287	+			-1.1
77,288	-			+0.5
77,288	-			+0.3
77,288	-			-1.5
77,288	-			-0.7
77,288	-			-1.1
77,400	+			-1.1
77,400	+			+0.9
77,400	+			+0.3
77,838	+	MPMX19_00073	0.29	+0.4
77,838	+	MPMX19_00073	0.29	-0.1
77,838	+	MPMX19_00073	0.29	-1.1
77,839	-	MPMX19_00073	0.29	+0.5
77,839	-	MPMX19_00073	0.29	-0.1
77,839	-	MPMX19_00073	0.29	-0.1
77,839	-	MPMX19_00073	0.29	-0.2
77,839	-	MPMX19_00073	0.29	+0.7
77,871	+	MPMX19_00073	0.31	-2.5
77,872	-	MPMX19_00073	0.31	+0.9
77,952	+	MPMX19_00073	0.36	-0.7
77,952	+	MPMX19_00073	0.36	-1.1
77,952	+	MPMX19_00073	0.36	-1.9
77,952	+	MPMX19_00073	0.36	-0.3
77,952	+	MPMX19_00073	0.36	-0.1
77,952	+	MPMX19_00073	0.36	-0.4
77,952	+	MPMX19_00073	0.36	-0.8
77,952	+	MPMX19_00073	0.36	-1.7
77,952	+	MPMX19_00073	0.36	+0.9
77,952	+	MPMX19_00073	0.36	-0.4
77,952	+	MPMX19_00073	0.36	-0.1
77,952	+	MPMX19_00073	0.36	+0.3
77,952	+	MPMX19_00073	0.36	-1.6
77,952	+	MPMX19_00073	0.36	-1.7
77,952	+	MPMX19_00073	0.36	-1.1
77,952	+	MPMX19_00073	0.36	+0.8
77,952	+	MPMX19_00073	0.36	-1.1
77,953	-	MPMX19_00073	0.36	-0.4
77,953	-	MPMX19_00073	0.36	-1.0
77,953	-	MPMX19_00073	0.36	+0.1
77,953	-	MPMX19_00073	0.36	-0.2
77,953	-	MPMX19_00073	0.36	-0.4
77,953	-	MPMX19_00073	0.36	+0.9
77,953	-	MPMX19_00073	0.36	-0.4
77,953	-	MPMX19_00073	0.36	-0.0
77,953	-	MPMX19_00073	0.36	-0.5
77,953	-	MPMX19_00073	0.36	-0.1
77,953	-	MPMX19_00073	0.36	+1.2
77,953	-	MPMX19_00073	0.36	-1.2
77,953	-	MPMX19_00073	0.36	-0.5
77,953	-	MPMX19_00073	0.36	+1.5
77,953	-	MPMX19_00073	0.36	-0.7
77,953	-	MPMX19_00073	0.36	+0.1
77,953	-	MPMX19_00073	0.36	-0.5
77,953	-	MPMX19_00073	0.36	-0.8
77,991	+	MPMX19_00073	0.38	-0.6
77,991	+	MPMX19_00073	0.38	+0.9
77,991	+	MPMX19_00073	0.38	-1.7
77,991	+	MPMX19_00073	0.38	-2.7
77,991	+	MPMX19_00073	0.38	-0.5
77,991	+	MPMX19_00073	0.38	-0.1
77,991	+	MPMX19_00073	0.38	-1.4
77,991	+	MPMX19_00073	0.38	-0.4
77,991	+	MPMX19_00073	0.38	-1.3
77,991	+	MPMX19_00073	0.38	-1.1
77,991	+	MPMX19_00073	0.38	-1.9
77,991	+	MPMX19_00073	0.38	-1.9
77,992	-	MPMX19_00073	0.38	-1.1
77,992	-	MPMX19_00073	0.38	-1.7
77,992	-	MPMX19_00073	0.38	-0.4
77,992	-	MPMX19_00073	0.38	-1.1
77,992	-	MPMX19_00073	0.38	-0.1
78,009	+	MPMX19_00073	0.39	-0.9
78,063	+	MPMX19_00073	0.43	-0.7
78,063	+	MPMX19_00073	0.43	-0.1
78,063	+	MPMX19_00073	0.43	-3.0
78,063	+	MPMX19_00073	0.43	+0.1
78,063	+	MPMX19_00073	0.43	-0.4
78,063	+	MPMX19_00073	0.43	-1.0
78,063	+	MPMX19_00073	0.43	+0.7
78,063	+	MPMX19_00073	0.43	+0.9
78,063	+	MPMX19_00073	0.43	-0.3
78,063	+	MPMX19_00073	0.43	-0.9
78,063	+	MPMX19_00073	0.43	-1.7
78,063	+	MPMX19_00073	0.43	-1.2
78,063	+	MPMX19_00073	0.43	-0.1
78,063	+	MPMX19_00073	0.43	+0.6
78,064	-	MPMX19_00073	0.43	-2.2
78,064	-	MPMX19_00073	0.43	-0.1
78,064	-	MPMX19_00073	0.43	-1.1
78,064	-	MPMX19_00073	0.43	-0.1
78,064	-	MPMX19_00073	0.43	-0.9
78,064	-	MPMX19_00073	0.43	-1.7
78,064	-	MPMX19_00073	0.43	-0.5
78,064	-	MPMX19_00073	0.43	-0.7
78,064	-	MPMX19_00073	0.43	-0.5
78,064	-	MPMX19_00073	0.43	-1.4
78,064	-	MPMX19_00073	0.43	-1.2
78,064	-	MPMX19_00073	0.43	-1.9

Or see this region's nucleotide sequence