Strain Fitness in Escherichia coli ECRC101 around MCAODC_09245

Experiment: WM_Bas14

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntygiF and glnE are separated by 22 nucleotidesglnE and hldE are separated by 47 nucleotides MCAODC_09240: ygiF - inorganic triphosphatase, at 1,844,273 to 1,845,574 ygiF MCAODC_09245: glnE - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 1,845,597 to 1,848,437 glnE MCAODC_09250: hldE - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 1,848,485 to 1,849,918 hldE Position (kb) 1845 1846 1847 1848 1849Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1844.619 kb on + strand, within ygiFat 1844.737 kb on + strand, within ygiFat 1844.737 kb on + strand, within ygiFat 1844.737 kb on + strand, within ygiFat 1844.738 kb on - strand, within ygiFat 1844.859 kb on - strand, within ygiFat 1844.984 kb on + strand, within ygiFat 1845.046 kb on + strand, within ygiFat 1845.046 kb on + strand, within ygiFat 1845.046 kb on + strand, within ygiFat 1845.061 kb on + strand, within ygiFat 1845.082 kb on + strand, within ygiFat 1845.083 kb on - strand, within ygiFat 1845.111 kb on + strand, within ygiFat 1845.112 kb on - strand, within ygiFat 1845.176 kb on + strand, within ygiFat 1845.176 kb on + strand, within ygiFat 1845.176 kb on + strand, within ygiFat 1845.176 kb on + strand, within ygiFat 1845.177 kb on - strand, within ygiFat 1845.182 kb on - strand, within ygiFat 1845.225 kb on + strand, within ygiFat 1845.225 kb on + strand, within ygiFat 1845.226 kb on - strand, within ygiFat 1845.226 kb on - strand, within ygiFat 1845.249 kb on + strand, within ygiFat 1845.250 kb on - strand, within ygiFat 1845.397 kb on + strand, within ygiFat 1845.408 kb on + strand, within ygiFat 1845.408 kb on + strand, within ygiFat 1845.426 kb on - strand, within ygiFat 1845.428 kb on + strand, within ygiFat 1845.428 kb on + strand, within ygiFat 1845.428 kb on + strand, within ygiFat 1845.428 kb on + strand, within ygiFat 1845.428 kb on + strand, within ygiFat 1845.429 kb on - strand, within ygiFat 1845.429 kb on - strand, within ygiFat 1845.429 kb on - strand, within ygiFat 1845.429 kb on - strand, within ygiFat 1845.485 kb on - strandat 1845.485 kb on - strandat 1845.586 kb on + strandat 1845.596 kb on + strandat 1845.619 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.733 kb on + strandat 1845.734 kb on - strandat 1845.734 kb on - strandat 1845.734 kb on - strandat 1845.734 kb on - strandat 1845.734 kb on - strandat 1845.801 kb on + strandat 1845.801 kb on + strandat 1845.801 kb on + strandat 1845.801 kb on + strandat 1845.802 kb on - strandat 1845.802 kb on - strandat 1845.802 kb on - strandat 1845.897 kb on - strand, within glnEat 1845.940 kb on + strand, within glnEat 1845.941 kb on - strand, within glnEat 1845.941 kb on - strand, within glnEat 1845.957 kb on + strand, within glnEat 1845.998 kb on - strand, within glnEat 1845.998 kb on - strand, within glnEat 1846.000 kb on - strand, within glnEat 1846.000 kb on - strand, within glnEat 1846.069 kb on + strand, within glnEat 1846.079 kb on + strand, within glnEat 1846.079 kb on + strand, within glnEat 1846.080 kb on - strand, within glnEat 1846.151 kb on + strand, within glnEat 1846.151 kb on + strand, within glnEat 1846.152 kb on - strand, within glnEat 1846.218 kb on - strand, within glnEat 1846.329 kb on + strand, within glnEat 1846.330 kb on - strand, within glnEat 1846.330 kb on - strand, within glnEat 1846.333 kb on - strand, within glnEat 1846.333 kb on - strand, within glnEat 1846.333 kb on - strand, within glnEat 1846.407 kb on + strand, within glnEat 1846.407 kb on + strand, within glnEat 1846.455 kb on + strand, within glnEat 1846.455 kb on + strand, within glnEat 1846.456 kb on - strand, within glnEat 1846.541 kb on + strand, within glnEat 1846.541 kb on + strand, within glnEat 1846.581 kb on - strand, within glnEat 1846.716 kb on + strand, within glnEat 1846.716 kb on + strand, within glnEat 1846.717 kb on - strand, within glnEat 1846.717 kb on - strand, within glnEat 1846.717 kb on - strand, within glnEat 1846.717 kb on - strand, within glnEat 1846.796 kb on + strand, within glnEat 1846.868 kb on + strand, within glnEat 1846.868 kb on + strand, within glnEat 1846.868 kb on + strand, within glnEat 1846.868 kb on + strand, within glnEat 1846.868 kb on + strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.869 kb on - strand, within glnEat 1846.893 kb on - strand, within glnEat 1846.893 kb on - strand, within glnEat 1846.991 kb on + strand, within glnEat 1846.992 kb on - strand, within glnEat 1846.992 kb on - strand, within glnEat 1846.992 kb on - strand, within glnEat 1846.992 kb on - strand, within glnEat 1846.992 kb on - strand, within glnEat 1847.217 kb on + strand, within glnEat 1847.218 kb on - strand, within glnEat 1847.218 kb on - strand, within glnEat 1847.218 kb on - strand, within glnEat 1847.218 kb on - strand, within glnEat 1847.221 kb on + strand, within glnEat 1847.222 kb on - strand, within glnEat 1847.253 kb on - strand, within glnEat 1847.317 kb on + strand, within glnEat 1847.353 kb on - strand, within glnEat 1847.353 kb on - strand, within glnEat 1847.398 kb on - strand, within glnEat 1847.398 kb on - strand, within glnEat 1847.398 kb on - strand, within glnEat 1847.398 kb on - strand, within glnEat 1847.473 kb on + strand, within glnEat 1847.474 kb on - strand, within glnEat 1847.533 kb on + strand, within glnEat 1847.533 kb on + strand, within glnEat 1847.534 kb on - strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.557 kb on + strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.558 kb on - strand, within glnEat 1847.602 kb on - strand, within glnEat 1847.684 kb on - strand, within glnEat 1847.689 kb on - strand, within glnEat 1847.689 kb on - strand, within glnEat 1847.689 kb on - strand, within glnEat 1847.779 kb on - strand, within glnEat 1847.801 kb on + strand, within glnEat 1847.802 kb on - strand, within glnEat 1847.802 kb on - strand, within glnEat 1847.802 kb on - strand, within glnEat 1847.841 kb on + strand, within glnEat 1847.842 kb on - strand, within glnEat 1847.842 kb on - strand, within glnEat 1847.891 kb on + strand, within glnEat 1847.892 kb on - strand, within glnEat 1847.971 kb on + strand, within glnEat 1847.971 kb on + strand, within glnEat 1847.971 kb on + strand, within glnEat 1847.971 kb on + strand, within glnEat 1847.972 kb on - strand, within glnEat 1847.972 kb on - strand, within glnEat 1847.972 kb on - strand, within glnEat 1847.976 kb on + strand, within glnEat 1848.027 kb on - strand, within glnEat 1848.047 kb on + strand, within glnEat 1848.048 kb on - strand, within glnEat 1848.048 kb on - strand, within glnEat 1848.128 kb on + strand, within glnEat 1848.306 kb on + strandat 1848.306 kb on + strandat 1848.306 kb on + strandat 1848.306 kb on + strandat 1848.307 kb on - strandat 1848.307 kb on - strandat 1848.307 kb on - strandat 1848.307 kb on - strandat 1848.312 kb on - strandat 1848.312 kb on - strandat 1848.312 kb on - strandat 1848.343 kb on + strandat 1848.440 kb on + strandat 1848.440 kb on + strandat 1848.440 kb on + strandat 1848.440 kb on + strandat 1848.440 kb on + strandat 1848.440 kb on + strandat 1848.441 kb on - strandat 1848.441 kb on - strandat 1848.441 kb on - strandat 1848.441 kb on - strandat 1848.441 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_Bas14
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1,844,619 + ygiF MCAODC_09240 0.27 -0.3
1,844,737 + ygiF MCAODC_09240 0.36 -1.5
1,844,737 + ygiF MCAODC_09240 0.36 +0.2
1,844,737 + ygiF MCAODC_09240 0.36 -0.1
1,844,738 - ygiF MCAODC_09240 0.36 +0.2
1,844,859 - ygiF MCAODC_09240 0.45 -0.8
1,844,984 + ygiF MCAODC_09240 0.55 -1.4
1,845,046 + ygiF MCAODC_09240 0.59 +0.8
1,845,046 + ygiF MCAODC_09240 0.59 -0.4
1,845,046 + ygiF MCAODC_09240 0.59 +1.0
1,845,061 + ygiF MCAODC_09240 0.61 -0.1
1,845,082 + ygiF MCAODC_09240 0.62 +0.2
1,845,083 - ygiF MCAODC_09240 0.62 +0.7
1,845,111 + ygiF MCAODC_09240 0.64 -0.4
1,845,112 - ygiF MCAODC_09240 0.64 +0.1
1,845,176 + ygiF MCAODC_09240 0.69 -0.5
1,845,176 + ygiF MCAODC_09240 0.69 +0.3
1,845,176 + ygiF MCAODC_09240 0.69 -0.9
1,845,176 + ygiF MCAODC_09240 0.69 -1.0
1,845,177 - ygiF MCAODC_09240 0.69 +0.7
1,845,182 - ygiF MCAODC_09240 0.70 +1.0
1,845,225 + ygiF MCAODC_09240 0.73 -0.4
1,845,225 + ygiF MCAODC_09240 0.73 +1.0
1,845,226 - ygiF MCAODC_09240 0.73 +0.9
1,845,226 - ygiF MCAODC_09240 0.73 +0.1
1,845,249 + ygiF MCAODC_09240 0.75 +0.0
1,845,250 - ygiF MCAODC_09240 0.75 -0.0
1,845,397 + ygiF MCAODC_09240 0.86 +0.5
1,845,408 + ygiF MCAODC_09240 0.87 +0.0
1,845,408 + ygiF MCAODC_09240 0.87 -0.3
1,845,426 - ygiF MCAODC_09240 0.89 +0.4
1,845,428 + ygiF MCAODC_09240 0.89 -0.4
1,845,428 + ygiF MCAODC_09240 0.89 -1.1
1,845,428 + ygiF MCAODC_09240 0.89 +0.4
1,845,428 + ygiF MCAODC_09240 0.89 +0.2
1,845,428 + ygiF MCAODC_09240 0.89 +0.6
1,845,429 - ygiF MCAODC_09240 0.89 +0.6
1,845,429 - ygiF MCAODC_09240 0.89 +0.6
1,845,429 - ygiF MCAODC_09240 0.89 -0.1
1,845,429 - ygiF MCAODC_09240 0.89 -0.1
1,845,485 - -0.2
1,845,485 - +0.7
1,845,586 + +0.1
1,845,596 + -0.3
1,845,619 + -0.0
1,845,733 + -0.4
1,845,733 + +1.0
1,845,733 + -1.0
1,845,733 + -0.2
1,845,733 + +0.2
1,845,733 + +0.8
1,845,733 + -0.6
1,845,734 - -1.2
1,845,734 - +0.2
1,845,734 - +0.1
1,845,734 - +0.6
1,845,734 - +0.2
1,845,801 + -0.8
1,845,801 + +0.6
1,845,801 + +0.9
1,845,801 + +0.2
1,845,802 - -0.6
1,845,802 - -0.7
1,845,802 - -0.8
1,845,897 - glnE MCAODC_09245 0.11 +0.3
1,845,940 + glnE MCAODC_09245 0.12 -0.5
1,845,941 - glnE MCAODC_09245 0.12 +0.3
1,845,941 - glnE MCAODC_09245 0.12 +0.6
1,845,957 + glnE MCAODC_09245 0.13 -0.6
1,845,998 - glnE MCAODC_09245 0.14 -0.4
1,845,998 - glnE MCAODC_09245 0.14 -1.7
1,846,000 - glnE MCAODC_09245 0.14 +0.0
1,846,000 - glnE MCAODC_09245 0.14 +0.9
1,846,069 + glnE MCAODC_09245 0.17 +1.8
1,846,079 + glnE MCAODC_09245 0.17 +0.3
1,846,079 + glnE MCAODC_09245 0.17 +1.0
1,846,080 - glnE MCAODC_09245 0.17 -0.0
1,846,151 + glnE MCAODC_09245 0.20 +0.6
1,846,151 + glnE MCAODC_09245 0.20 -1.2
1,846,152 - glnE MCAODC_09245 0.20 -2.7
1,846,218 - glnE MCAODC_09245 0.22 +0.7
1,846,329 + glnE MCAODC_09245 0.26 +1.3
1,846,330 - glnE MCAODC_09245 0.26 +0.1
1,846,330 - glnE MCAODC_09245 0.26 +1.4
1,846,333 - glnE MCAODC_09245 0.26 -0.1
1,846,333 - glnE MCAODC_09245 0.26 -0.4
1,846,333 - glnE MCAODC_09245 0.26 -0.0
1,846,407 + glnE MCAODC_09245 0.29 +0.1
1,846,407 + glnE MCAODC_09245 0.29 +0.7
1,846,455 + glnE MCAODC_09245 0.30 -0.3
1,846,455 + glnE MCAODC_09245 0.30 +1.6
1,846,456 - glnE MCAODC_09245 0.30 -0.0
1,846,541 + glnE MCAODC_09245 0.33 +0.8
1,846,541 + glnE MCAODC_09245 0.33 +0.1
1,846,581 - glnE MCAODC_09245 0.35 +0.3
1,846,716 + glnE MCAODC_09245 0.39 +0.8
1,846,716 + glnE MCAODC_09245 0.39 +0.4
1,846,717 - glnE MCAODC_09245 0.39 +0.1
1,846,717 - glnE MCAODC_09245 0.39 +0.3
1,846,717 - glnE MCAODC_09245 0.39 -0.2
1,846,717 - glnE MCAODC_09245 0.39 +1.9
1,846,796 + glnE MCAODC_09245 0.42 -0.2
1,846,868 + glnE MCAODC_09245 0.45 -1.2
1,846,868 + glnE MCAODC_09245 0.45 -0.9
1,846,868 + glnE MCAODC_09245 0.45 -0.4
1,846,868 + glnE MCAODC_09245 0.45 -1.1
1,846,868 + glnE MCAODC_09245 0.45 -1.0
1,846,869 - glnE MCAODC_09245 0.45 +1.7
1,846,869 - glnE MCAODC_09245 0.45 +0.4
1,846,869 - glnE MCAODC_09245 0.45 +0.5
1,846,869 - glnE MCAODC_09245 0.45 +1.2
1,846,869 - glnE MCAODC_09245 0.45 +0.2
1,846,869 - glnE MCAODC_09245 0.45 +0.4
1,846,869 - glnE MCAODC_09245 0.45 +0.3
1,846,893 - glnE MCAODC_09245 0.46 -0.8
1,846,893 - glnE MCAODC_09245 0.46 +0.3
1,846,991 + glnE MCAODC_09245 0.49 -0.5
1,846,992 - glnE MCAODC_09245 0.49 +0.5
1,846,992 - glnE MCAODC_09245 0.49 -0.2
1,846,992 - glnE MCAODC_09245 0.49 +0.3
1,846,992 - glnE MCAODC_09245 0.49 +0.9
1,846,992 - glnE MCAODC_09245 0.49 +0.1
1,847,217 + glnE MCAODC_09245 0.57 -0.1
1,847,218 - glnE MCAODC_09245 0.57 +0.6
1,847,218 - glnE MCAODC_09245 0.57 +2.7
1,847,218 - glnE MCAODC_09245 0.57 -1.4
1,847,218 - glnE MCAODC_09245 0.57 +0.9
1,847,221 + glnE MCAODC_09245 0.57 +0.0
1,847,222 - glnE MCAODC_09245 0.57 -0.0
1,847,253 - glnE MCAODC_09245 0.58 +0.0
1,847,317 + glnE MCAODC_09245 0.61 +0.3
1,847,353 - glnE MCAODC_09245 0.62 +0.5
1,847,353 - glnE MCAODC_09245 0.62 +0.2
1,847,398 - glnE MCAODC_09245 0.63 -1.4
1,847,398 - glnE MCAODC_09245 0.63 -0.7
1,847,398 - glnE MCAODC_09245 0.63 -0.3
1,847,398 - glnE MCAODC_09245 0.63 +0.1
1,847,473 + glnE MCAODC_09245 0.66 +0.9
1,847,474 - glnE MCAODC_09245 0.66 +0.1
1,847,533 + glnE MCAODC_09245 0.68 -0.7
1,847,533 + glnE MCAODC_09245 0.68 +0.5
1,847,534 - glnE MCAODC_09245 0.68 +0.4
1,847,557 + glnE MCAODC_09245 0.69 -0.3
1,847,557 + glnE MCAODC_09245 0.69 +1.0
1,847,557 + glnE MCAODC_09245 0.69 -0.6
1,847,557 + glnE MCAODC_09245 0.69 +0.2
1,847,557 + glnE MCAODC_09245 0.69 +0.0
1,847,557 + glnE MCAODC_09245 0.69 -1.0
1,847,558 - glnE MCAODC_09245 0.69 -0.8
1,847,558 - glnE MCAODC_09245 0.69 +0.3
1,847,558 - glnE MCAODC_09245 0.69 +0.0
1,847,558 - glnE MCAODC_09245 0.69 +0.5
1,847,558 - glnE MCAODC_09245 0.69 -0.6
1,847,558 - glnE MCAODC_09245 0.69 -0.0
1,847,558 - glnE MCAODC_09245 0.69 +0.2
1,847,558 - glnE MCAODC_09245 0.69 +0.3
1,847,558 - glnE MCAODC_09245 0.69 +0.3
1,847,558 - glnE MCAODC_09245 0.69 +0.3
1,847,558 - glnE MCAODC_09245 0.69 +0.6
1,847,558 - glnE MCAODC_09245 0.69 +1.4
1,847,602 - glnE MCAODC_09245 0.71 -0.4
1,847,684 - glnE MCAODC_09245 0.73 -0.2
1,847,689 - glnE MCAODC_09245 0.74 +0.6
1,847,689 - glnE MCAODC_09245 0.74 -1.2
1,847,689 - glnE MCAODC_09245 0.74 -1.2
1,847,779 - glnE MCAODC_09245 0.77 -0.4
1,847,801 + glnE MCAODC_09245 0.78 -0.9
1,847,802 - glnE MCAODC_09245 0.78 +0.3
1,847,802 - glnE MCAODC_09245 0.78 +0.7
1,847,802 - glnE MCAODC_09245 0.78 +0.9
1,847,841 + glnE MCAODC_09245 0.79 -0.6
1,847,842 - glnE MCAODC_09245 0.79 +0.2
1,847,842 - glnE MCAODC_09245 0.79 +1.4
1,847,891 + glnE MCAODC_09245 0.81 -1.1
1,847,892 - glnE MCAODC_09245 0.81 -0.2
1,847,971 + glnE MCAODC_09245 0.84 -0.8
1,847,971 + glnE MCAODC_09245 0.84 -1.6
1,847,971 + glnE MCAODC_09245 0.84 +0.6
1,847,971 + glnE MCAODC_09245 0.84 -0.4
1,847,972 - glnE MCAODC_09245 0.84 +1.8
1,847,972 - glnE MCAODC_09245 0.84 +1.3
1,847,972 - glnE MCAODC_09245 0.84 +0.9
1,847,976 + glnE MCAODC_09245 0.84 -0.1
1,848,027 - glnE MCAODC_09245 0.86 +0.5
1,848,047 + glnE MCAODC_09245 0.86 -0.1
1,848,048 - glnE MCAODC_09245 0.86 -2.1
1,848,048 - glnE MCAODC_09245 0.86 +0.1
1,848,128 + glnE MCAODC_09245 0.89 -0.1
1,848,306 + +0.2
1,848,306 + -0.2
1,848,306 + -0.0
1,848,306 + +0.3
1,848,307 - -3.7
1,848,307 - +1.7
1,848,307 - -0.4
1,848,307 - +0.5
1,848,312 - -0.8
1,848,312 - -0.4
1,848,312 - +0.1
1,848,343 + -0.2
1,848,440 + +0.2
1,848,440 + +0.5
1,848,440 + +0.5
1,848,440 + +0.5
1,848,440 + +0.1
1,848,440 + -0.1
1,848,441 - +0.7
1,848,441 - +0.5
1,848,441 - -0.2
1,848,441 - -2.9
1,848,441 - -0.8

Or see this region's nucleotide sequence