Experiment: WM_Bas14
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt malF and malG are separated by 14 nucleotides malG and xylE are separated by 371 nucleotides
MCAODC_03625: malF - maltose ABC transporter permease MalF, at 726,562 to 728,106
malF
MCAODC_03630: malG - maltose ABC transporter permease MalG, at 728,121 to 729,011
malG
MCAODC_03635: xylE - D-xylose transporter XylE, at 729,383 to 730,858
xylE
Position (kb) 728
729
730 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 727.225 kb on - strand, within malF at 727.271 kb on - strand, within malF at 727.271 kb on - strand, within malF at 727.314 kb on - strand, within malF at 727.324 kb on + strand, within malF at 727.681 kb on - strand, within malF at 727.708 kb on + strand, within malF at 727.708 kb on + strand, within malF at 727.760 kb on - strand, within malF at 727.813 kb on - strand, within malF at 727.901 kb on + strand, within malF at 727.950 kb on + strand, within malF at 727.950 kb on + strand, within malF at 727.951 kb on - strand, within malF at 727.951 kb on - strand, within malF at 727.951 kb on - strand, within malF at 727.965 kb on + strand at 727.965 kb on + strand at 727.969 kb on + strand at 727.969 kb on + strand at 727.970 kb on - strand at 727.970 kb on - strand at 727.975 kb on + strand at 727.976 kb on - strand at 727.976 kb on - strand at 727.976 kb on - strand at 728.104 kb on + strand at 728.113 kb on + strand at 728.163 kb on - strand at 728.166 kb on - strand at 728.166 kb on - strand at 728.176 kb on + strand at 728.177 kb on - strand at 728.177 kb on - strand at 728.182 kb on + strand at 728.182 kb on + strand at 728.183 kb on - strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.201 kb on + strand at 728.228 kb on + strand, within malG at 728.229 kb on - strand, within malG at 728.308 kb on + strand, within malG at 728.308 kb on + strand, within malG at 728.309 kb on - strand, within malG at 728.442 kb on + strand, within malG at 728.521 kb on + strand, within malG at 728.521 kb on + strand, within malG at 728.541 kb on + strand, within malG at 728.542 kb on - strand, within malG at 728.542 kb on - strand, within malG at 728.569 kb on - strand, within malG at 728.569 kb on - strand, within malG at 728.591 kb on + strand, within malG at 728.591 kb on + strand, within malG at 728.591 kb on + strand, within malG at 728.659 kb on - strand, within malG at 728.756 kb on - strand, within malG at 728.773 kb on + strand, within malG at 728.789 kb on + strand, within malG at 728.802 kb on - strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.847 kb on + strand, within malG at 728.848 kb on - strand, within malG at 728.848 kb on - strand, within malG at 728.892 kb on + strand, within malG at 729.009 kb on + strand at 729.033 kb on - strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.053 kb on + strand at 729.054 kb on - strand at 729.054 kb on - strand at 729.189 kb on + strand at 729.225 kb on + strand at 729.398 kb on - strand at 729.427 kb on - strand at 729.482 kb on - strand at 729.553 kb on - strand, within xylE at 729.553 kb on - strand, within xylE at 729.612 kb on - strand, within xylE at 729.619 kb on + strand, within xylE at 729.682 kb on - strand, within xylE at 729.718 kb on - strand, within xylE at 729.756 kb on - strand, within xylE at 729.756 kb on - strand, within xylE at 729.756 kb on - strand, within xylE at 729.830 kb on + strand, within xylE at 729.830 kb on + strand, within xylE at 729.857 kb on - strand, within xylE at 729.912 kb on + strand, within xylE at 729.984 kb on - strand, within xylE at 729.985 kb on + strand, within xylE at 729.986 kb on - strand, within xylE at 729.986 kb on - strand, within xylE at 729.986 kb on - strand, within xylE at 730.003 kb on + strand, within xylE
Per-strain Table
Position Strand Gene LocusTag Fraction WM_Bas14 remove 727,225 - malF MCAODC_03625 0.43 -0.5 727,271 - malF MCAODC_03625 0.46 +0.5 727,271 - malF MCAODC_03625 0.46 +0.2 727,314 - malF MCAODC_03625 0.49 +0.0 727,324 + malF MCAODC_03625 0.49 -0.1 727,681 - malF MCAODC_03625 0.72 -2.8 727,708 + malF MCAODC_03625 0.74 +0.7 727,708 + malF MCAODC_03625 0.74 -0.5 727,760 - malF MCAODC_03625 0.78 +0.5 727,813 - malF MCAODC_03625 0.81 +0.5 727,901 + malF MCAODC_03625 0.87 -0.0 727,950 + malF MCAODC_03625 0.90 +0.1 727,950 + malF MCAODC_03625 0.90 -0.3 727,951 - malF MCAODC_03625 0.90 +0.5 727,951 - malF MCAODC_03625 0.90 +0.3 727,951 - malF MCAODC_03625 0.90 +0.9 727,965 + -0.2 727,965 + +0.7 727,969 + +0.2 727,969 + -1.8 727,970 - -0.3 727,970 - +0.4 727,975 + +0.3 727,976 - +0.4 727,976 - -0.3 727,976 - -0.7 728,104 + -1.5 728,113 + -0.3 728,163 - -0.4 728,166 - +0.1 728,166 - +0.3 728,176 + +1.2 728,177 - +1.3 728,177 - +0.4 728,182 + +0.3 728,182 + -2.0 728,183 - +0.4 728,201 + +0.2 728,201 + -0.7 728,201 + -1.2 728,201 + -1.3 728,228 + malG MCAODC_03630 0.12 -1.1 728,229 - malG MCAODC_03630 0.12 +0.3 728,308 + malG MCAODC_03630 0.21 +0.4 728,308 + malG MCAODC_03630 0.21 +0.9 728,309 - malG MCAODC_03630 0.21 +0.3 728,442 + malG MCAODC_03630 0.36 +1.6 728,521 + malG MCAODC_03630 0.45 +1.2 728,521 + malG MCAODC_03630 0.45 -0.6 728,541 + malG MCAODC_03630 0.47 -0.1 728,542 - malG MCAODC_03630 0.47 +0.6 728,542 - malG MCAODC_03630 0.47 -0.3 728,569 - malG MCAODC_03630 0.50 -0.4 728,569 - malG MCAODC_03630 0.50 +0.7 728,591 + malG MCAODC_03630 0.53 -1.3 728,591 + malG MCAODC_03630 0.53 -2.0 728,591 + malG MCAODC_03630 0.53 +0.2 728,659 - malG MCAODC_03630 0.60 -0.7 728,756 - malG MCAODC_03630 0.71 -0.0 728,773 + malG MCAODC_03630 0.73 +0.0 728,789 + malG MCAODC_03630 0.75 +0.2 728,802 - malG MCAODC_03630 0.76 +0.2 728,847 + malG MCAODC_03630 0.81 +1.2 728,847 + malG MCAODC_03630 0.81 -0.5 728,847 + malG MCAODC_03630 0.81 -1.9 728,847 + malG MCAODC_03630 0.81 +0.2 728,848 - malG MCAODC_03630 0.82 +0.1 728,848 - malG MCAODC_03630 0.82 +0.3 728,892 + malG MCAODC_03630 0.87 +0.1 729,009 + +0.1 729,033 - -0.4 729,053 + +1.1 729,053 + +0.2 729,053 + -0.9 729,053 + -0.8 729,053 + -0.5 729,054 - +0.2 729,054 - +0.0 729,189 + -0.5 729,225 + -0.5 729,398 - +0.4 729,427 - -1.5 729,482 - -0.5 729,553 - xylE MCAODC_03635 0.12 +0.5 729,553 - xylE MCAODC_03635 0.12 -0.1 729,612 - xylE MCAODC_03635 0.16 -0.2 729,619 + xylE MCAODC_03635 0.16 -0.4 729,682 - xylE MCAODC_03635 0.20 -0.2 729,718 - xylE MCAODC_03635 0.23 -0.6 729,756 - xylE MCAODC_03635 0.25 -0.2 729,756 - xylE MCAODC_03635 0.25 -0.2 729,756 - xylE MCAODC_03635 0.25 -0.7 729,830 + xylE MCAODC_03635 0.30 +0.3 729,830 + xylE MCAODC_03635 0.30 +1.0 729,857 - xylE MCAODC_03635 0.32 -1.7 729,912 + xylE MCAODC_03635 0.36 +0.1 729,984 - xylE MCAODC_03635 0.41 +0.9 729,985 + xylE MCAODC_03635 0.41 +0.1 729,986 - xylE MCAODC_03635 0.41 +0.7 729,986 - xylE MCAODC_03635 0.41 -1.1 729,986 - xylE MCAODC_03635 0.41 +0.1 730,003 + xylE MCAODC_03635 0.42 -0.3
Or see this region's nucleotide sequence