Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16160 and A4249_RS16165 overlap by 4 nucleotides
A4249_RS16160: A4249_RS16160 - cystathionine gamma-synthase, at 3,260,922 to 3,262,103
_RS16160
A4249_RS16165: A4249_RS16165 - homoserine O-succinyltransferase, at 3,262,100 to 3,263,152
_RS16165
Position (kb)
3262
3263
3264 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3261.235 kb on - strand, within A4249_RS16160 at 3261.354 kb on + strand, within A4249_RS16160 at 3261.355 kb on - strand, within A4249_RS16160 at 3261.355 kb on - strand, within A4249_RS16160 at 3261.355 kb on - strand, within A4249_RS16160 at 3261.382 kb on + strand, within A4249_RS16160 at 3261.383 kb on - strand, within A4249_RS16160 at 3261.383 kb on - strand, within A4249_RS16160 at 3261.383 kb on - strand, within A4249_RS16160 at 3261.383 kb on - strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.656 kb on + strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.657 kb on - strand, within A4249_RS16160 at 3261.683 kb on + strand, within A4249_RS16160 at 3261.683 kb on + strand, within A4249_RS16160 at 3261.683 kb on + strand, within A4249_RS16160 at 3261.683 kb on + strand, within A4249_RS16160 at 3261.684 kb on - strand, within A4249_RS16160 at 3261.684 kb on - strand, within A4249_RS16160 at 3261.796 kb on + strand, within A4249_RS16160 at 3261.797 kb on - strand, within A4249_RS16160 at 3261.878 kb on + strand, within A4249_RS16160 at 3261.958 kb on + strand, within A4249_RS16160 at 3261.958 kb on + strand, within A4249_RS16160 at 3261.958 kb on + strand, within A4249_RS16160 at 3261.958 kb on + strand, within A4249_RS16160 at 3261.958 kb on + strand, within A4249_RS16160 at 3261.959 kb on - strand, within A4249_RS16160 at 3261.959 kb on - strand, within A4249_RS16160 at 3261.959 kb on - strand, within A4249_RS16160 at 3261.959 kb on - strand, within A4249_RS16160 at 3261.964 kb on + strand, within A4249_RS16160 at 3261.964 kb on + strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.965 kb on - strand, within A4249_RS16160 at 3261.997 kb on + strand at 3261.997 kb on + strand at 3261.997 kb on + strand at 3261.997 kb on + strand at 3261.997 kb on + strand at 3261.997 kb on + strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3261.998 kb on - strand at 3262.012 kb on + strand at 3262.012 kb on + strand at 3262.012 kb on + strand at 3262.012 kb on + strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.013 kb on - strand at 3262.050 kb on - strand at 3262.111 kb on + strand at 3262.111 kb on + strand at 3262.179 kb on + strand at 3262.180 kb on - strand at 3262.318 kb on + strand, within A4249_RS16165 at 3262.319 kb on - strand, within A4249_RS16165 at 3262.378 kb on - strand, within A4249_RS16165 at 3262.401 kb on + strand, within A4249_RS16165 at 3262.402 kb on - strand, within A4249_RS16165 at 3262.483 kb on - strand, within A4249_RS16165 at 3262.483 kb on - strand, within A4249_RS16165 at 3262.863 kb on - strand, within A4249_RS16165 at 3262.863 kb on - strand, within A4249_RS16165 at 3262.984 kb on + strand, within A4249_RS16165 at 3262.985 kb on - strand, within A4249_RS16165 at 3263.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 3,261,235 - A4249_RS16160 0.26 +1.9 3,261,354 + A4249_RS16160 0.37 +0.4 3,261,355 - A4249_RS16160 0.37 -0.2 3,261,355 - A4249_RS16160 0.37 +0.7 3,261,355 - A4249_RS16160 0.37 +0.4 3,261,382 + A4249_RS16160 0.39 +0.3 3,261,383 - A4249_RS16160 0.39 -0.5 3,261,383 - A4249_RS16160 0.39 -0.4 3,261,383 - A4249_RS16160 0.39 -0.5 3,261,383 - A4249_RS16160 0.39 +0.5 3,261,656 + A4249_RS16160 0.62 -1.1 3,261,656 + A4249_RS16160 0.62 +1.1 3,261,656 + A4249_RS16160 0.62 -0.2 3,261,656 + A4249_RS16160 0.62 +0.4 3,261,656 + A4249_RS16160 0.62 -0.8 3,261,656 + A4249_RS16160 0.62 +0.2 3,261,656 + A4249_RS16160 0.62 -0.2 3,261,657 - A4249_RS16160 0.62 +1.1 3,261,657 - A4249_RS16160 0.62 +0.2 3,261,657 - A4249_RS16160 0.62 -0.2 3,261,657 - A4249_RS16160 0.62 -0.1 3,261,657 - A4249_RS16160 0.62 +0.2 3,261,657 - A4249_RS16160 0.62 +0.2 3,261,657 - A4249_RS16160 0.62 +0.1 3,261,657 - A4249_RS16160 0.62 +0.2 3,261,657 - A4249_RS16160 0.62 +0.6 3,261,657 - A4249_RS16160 0.62 +0.8 3,261,657 - A4249_RS16160 0.62 +0.6 3,261,657 - A4249_RS16160 0.62 -0.2 3,261,683 + A4249_RS16160 0.64 +0.3 3,261,683 + A4249_RS16160 0.64 -0.4 3,261,683 + A4249_RS16160 0.64 -0.9 3,261,683 + A4249_RS16160 0.64 -0.7 3,261,684 - A4249_RS16160 0.64 +0.4 3,261,684 - A4249_RS16160 0.64 -1.0 3,261,796 + A4249_RS16160 0.74 +0.5 3,261,797 - A4249_RS16160 0.74 -0.5 3,261,878 + A4249_RS16160 0.81 +0.2 3,261,958 + A4249_RS16160 0.88 -0.0 3,261,958 + A4249_RS16160 0.88 -2.0 3,261,958 + A4249_RS16160 0.88 -0.4 3,261,958 + A4249_RS16160 0.88 -0.9 3,261,958 + A4249_RS16160 0.88 +0.9 3,261,959 - A4249_RS16160 0.88 +0.2 3,261,959 - A4249_RS16160 0.88 +0.6 3,261,959 - A4249_RS16160 0.88 +0.6 3,261,959 - A4249_RS16160 0.88 +0.4 3,261,964 + A4249_RS16160 0.88 -0.4 3,261,964 + A4249_RS16160 0.88 -1.3 3,261,965 - A4249_RS16160 0.88 -0.3 3,261,965 - A4249_RS16160 0.88 +0.1 3,261,965 - A4249_RS16160 0.88 -1.1 3,261,965 - A4249_RS16160 0.88 +1.0 3,261,965 - A4249_RS16160 0.88 -0.0 3,261,965 - A4249_RS16160 0.88 -0.5 3,261,965 - A4249_RS16160 0.88 +0.2 3,261,997 + -0.3 3,261,997 + +0.4 3,261,997 + +0.0 3,261,997 + +0.4 3,261,997 + -0.3 3,261,997 + +0.1 3,261,998 - -0.5 3,261,998 - +0.5 3,261,998 - +0.5 3,261,998 - -0.5 3,261,998 - +1.4 3,261,998 - -0.1 3,261,998 - +0.2 3,262,012 + -0.1 3,262,012 + -0.5 3,262,012 + +0.4 3,262,012 + +0.7 3,262,013 - +0.8 3,262,013 - -0.7 3,262,013 - +0.1 3,262,013 - -0.1 3,262,013 - -1.4 3,262,013 - +0.6 3,262,013 - -0.0 3,262,050 - -0.4 3,262,111 + -0.6 3,262,111 + -0.4 3,262,179 + -0.2 3,262,180 - +1.5 3,262,318 + A4249_RS16165 0.21 -0.5 3,262,319 - A4249_RS16165 0.21 +0.5 3,262,378 - A4249_RS16165 0.26 +0.2 3,262,401 + A4249_RS16165 0.29 -0.6 3,262,402 - A4249_RS16165 0.29 -0.1 3,262,483 - A4249_RS16165 0.36 +0.1 3,262,483 - A4249_RS16165 0.36 -0.7 3,262,863 - A4249_RS16165 0.72 -0.6 3,262,863 - A4249_RS16165 0.72 +1.3 3,262,984 + A4249_RS16165 0.84 -1.4 3,262,985 - A4249_RS16165 0.84 -0.4 3,263,319 - +1.8
Or see this region's nucleotide sequence