Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11900

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
2,389,227	-		A4249_RS11895	0.44	+1.7
2,389,733	-				-0.3
2,389,842	-				+0.4
2,389,842	-				-0.4
2,390,003	+				+0.8
2,390,003	+				-0.1
2,390,004	-				-0.3
2,390,004	-				+0.1
2,390,057	+				-0.2
2,390,057	+				-0.0
2,390,057	+				-0.8
2,390,057	+				-0.3
2,390,058	-				-0.3
2,390,058	-				-1.2
2,390,058	-				+0.7
2,390,075	+				+0.6
2,390,075	+				-0.0
2,390,075	+				+0.9
2,390,075	+				-0.6
2,390,075	+				-0.0
2,390,075	+				-0.3
2,390,076	-				+0.5
2,390,076	-				-0.5
2,390,076	-				-0.3
2,390,076	-				-0.2
2,390,076	-				+0.5
2,390,162	+		A4249_RS11900	0.11	-0.1
2,390,162	+		A4249_RS11900	0.11	-0.1
2,390,162	+		A4249_RS11900	0.11	+0.5
2,390,162	+		A4249_RS11900	0.11	-0.1
2,390,163	-		A4249_RS11900	0.11	+0.0
2,390,163	-		A4249_RS11900	0.11	+0.8
2,390,163	-		A4249_RS11900	0.11	-0.5
2,390,163	-		A4249_RS11900	0.11	+0.2
2,390,177	+		A4249_RS11900	0.12	-0.8
2,390,177	+		A4249_RS11900	0.12	-0.9
2,390,177	+		A4249_RS11900	0.12	+0.8
2,390,177	+		A4249_RS11900	0.12	-0.5
2,390,177	+		A4249_RS11900	0.12	+0.7
2,390,178	-		A4249_RS11900	0.12	-0.5
2,390,178	-		A4249_RS11900	0.12	-0.0
2,390,276	+		A4249_RS11900	0.15	+0.8
2,390,276	+		A4249_RS11900	0.15	+0.1
2,390,276	+		A4249_RS11900	0.15	-0.1
2,390,276	+		A4249_RS11900	0.15	-0.7
2,390,277	-		A4249_RS11900	0.15	-0.3
2,390,277	-		A4249_RS11900	0.15	+0.5
2,390,277	-		A4249_RS11900	0.15	-0.2
2,390,277	-		A4249_RS11900	0.15	-1.5
2,390,277	-		A4249_RS11900	0.15	-1.5
2,390,277	-		A4249_RS11900	0.15	-0.1
2,390,277	-		A4249_RS11900	0.15	-0.1
2,390,291	+		A4249_RS11900	0.16	-0.6
2,390,291	+		A4249_RS11900	0.16	-0.7
2,390,291	+		A4249_RS11900	0.16	-0.5
2,390,292	-		A4249_RS11900	0.16	+0.3
2,390,292	-		A4249_RS11900	0.16	-1.5
2,390,292	-		A4249_RS11900	0.16	-0.6
2,390,292	-		A4249_RS11900	0.16	-0.6
2,390,292	-		A4249_RS11900	0.16	-0.0
2,390,292	-		A4249_RS11900	0.16	-0.3
2,390,310	-		A4249_RS11900	0.16	-0.4
2,390,387	+		A4249_RS11900	0.19	-0.3
2,390,387	+		A4249_RS11900	0.19	-0.8
2,390,387	+		A4249_RS11900	0.19	-0.1
2,390,388	-		A4249_RS11900	0.19	-0.7
2,390,388	-		A4249_RS11900	0.19	-0.4
2,390,388	-		A4249_RS11900	0.19	-0.1
2,390,543	+		A4249_RS11900	0.24	+0.3
2,390,543	+		A4249_RS11900	0.24	-0.2
2,390,544	-		A4249_RS11900	0.25	-0.3
2,390,544	-		A4249_RS11900	0.25	-0.2
2,390,544	-		A4249_RS11900	0.25	-0.5
2,390,544	-		A4249_RS11900	0.25	-0.3
2,390,544	-		A4249_RS11900	0.25	-0.7
2,390,544	-		A4249_RS11900	0.25	-0.6
2,390,544	-		A4249_RS11900	0.25	-0.3
2,390,544	-		A4249_RS11900	0.25	-0.1
2,390,544	-		A4249_RS11900	0.25	+0.3
2,390,549	+		A4249_RS11900	0.25	+0.6
2,390,549	+		A4249_RS11900	0.25	+0.1
2,390,549	+		A4249_RS11900	0.25	+0.9
2,390,549	+		A4249_RS11900	0.25	-2.3
2,390,549	+		A4249_RS11900	0.25	-0.5
2,390,549	+		A4249_RS11900	0.25	-0.4
2,390,549	+		A4249_RS11900	0.25	-0.1
2,390,550	-		A4249_RS11900	0.25	+0.3
2,390,550	-		A4249_RS11900	0.25	-0.1
2,390,550	-		A4249_RS11900	0.25	+0.0
2,390,550	-		A4249_RS11900	0.25	-0.1
2,390,550	-		A4249_RS11900	0.25	+0.7
2,390,551	+		A4249_RS11900	0.25	+0.3
2,390,551	+		A4249_RS11900	0.25	+0.6
2,390,551	+		A4249_RS11900	0.25	-0.3
2,390,551	+		A4249_RS11900	0.25	-0.6
2,390,551	+		A4249_RS11900	0.25	+0.9
2,390,551	+		A4249_RS11900	0.25	+0.4
2,390,552	-		A4249_RS11900	0.25	-0.4
2,390,552	-		A4249_RS11900	0.25	-0.0
2,390,552	-		A4249_RS11900	0.25	-0.3
2,390,552	-		A4249_RS11900	0.25	-1.7
2,390,552	-		A4249_RS11900	0.25	-0.2
2,390,552	-		A4249_RS11900	0.25	-0.2
2,390,552	-		A4249_RS11900	0.25	+0.7
2,390,552	-		A4249_RS11900	0.25	-0.5
2,390,552	-		A4249_RS11900	0.25	-1.2
2,390,552	-		A4249_RS11900	0.25	-0.7
2,390,552	-		A4249_RS11900	0.25	-0.1
2,391,196	+		A4249_RS11900	0.47	-0.5
2,391,196	+		A4249_RS11900	0.47	-1.6
2,391,196	+		A4249_RS11900	0.47	-0.5
2,391,196	+		A4249_RS11900	0.47	-0.2
2,391,196	+		A4249_RS11900	0.47	-0.6
2,391,196	+		A4249_RS11900	0.47	+0.8
2,391,197	-		A4249_RS11900	0.47	-1.0
2,391,197	-		A4249_RS11900	0.47	-0.3
2,391,197	-		A4249_RS11900	0.47	+0.6
2,391,197	-		A4249_RS11900	0.47	+0.5
2,391,197	-		A4249_RS11900	0.47	-0.7
2,391,386	+		A4249_RS11900	0.54	+0.8
2,391,386	+		A4249_RS11900	0.54	-0.3
2,391,387	-		A4249_RS11900	0.54	-0.8
2,392,187	+		A4249_RS11900	0.82	-0.4
2,392,496	+				-1.2
2,392,496	+				-0.2
2,392,496	+				+0.1
2,392,497	-				-0.7
2,392,497	-				-1.0
2,392,497	-				-1.2
2,392,497	-				-0.4
2,392,497	-				-1.2
2,392,497	-				+0.5
2,392,497	-				-0.5
2,392,535	+				+0.1
2,392,571	+				-0.3
2,392,742	+				+0.2
2,392,742	+				-0.7
2,392,742	+				-0.5
2,392,743	-				-0.9
2,392,744	+				-0.1
2,392,745	-				+0.1
2,392,764	+				+0.5
2,392,789	+				-1.0
2,392,789	+				+0.1
2,392,789	+				-0.4
2,393,084	+		A4249_RS11905	0.72	-0.9
2,393,085	-		A4249_RS11905	0.72	+0.5
2,393,085	-		A4249_RS11905	0.72	+0.8
2,393,085	-		A4249_RS11905	0.72	+0.1
2,393,085	-		A4249_RS11905	0.72	+0.2
2,393,085	-		A4249_RS11905	0.72	-0.7
2,393,133	-				-0.6
2,393,143	+				-0.5
2,393,144	-				+2.0
2,393,144	-				-0.0
2,393,144	-				+0.1
2,393,160	+				-0.2
2,393,160	+				-0.2
2,393,303	-		A4249_RS11910	0.19	-0.2
2,393,346	+		A4249_RS11910	0.28	+0.6
2,393,425	+		A4249_RS11910	0.44	-0.3
2,393,425	+		A4249_RS11910	0.44	+0.7
2,393,426	-		A4249_RS11910	0.44	+0.3
2,393,426	-		A4249_RS11910	0.44	+0.2
2,393,506	+		A4249_RS11910	0.60	-0.2
2,393,506	+		A4249_RS11910	0.60	+0.3
2,393,507	-		A4249_RS11910	0.60	-0.7
2,393,507	-		A4249_RS11910	0.60	+0.1
2,393,507	-		A4249_RS11910	0.60	+0.0
2,393,507	-		A4249_RS11910	0.60	+0.2
2,393,507	-		A4249_RS11910	0.60	-0.5
2,393,632	+		A4249_RS11910	0.86	-0.7
2,393,633	-		A4249_RS11910	0.86	+0.4
2,393,701	+				+0.1
2,393,701	+				+1.1