Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09590 and A4249_RS09595 are separated by 43 nucleotides A4249_RS09595 and A4249_RS09600 are separated by 311 nucleotides A4249_RS09600 and A4249_RS09605 are separated by 17 nucleotides A4249_RS09605 and A4249_RS09610 overlap by 1 nucleotides
A4249_RS09590: A4249_RS09590 - M20/M25/M40 family metallo-hydrolase, at 1,913,752 to 1,915,197
_RS09590
A4249_RS09595: A4249_RS09595 - DUF3297 family protein, at 1,915,241 to 1,915,480
_RS09595
A4249_RS09600: A4249_RS09600 - hypothetical protein, at 1,915,792 to 1,916,712
_RS09600
A4249_RS09605: A4249_RS09605 - DUF6468 domain-containing protein, at 1,916,730 to 1,917,311
_RS09605
A4249_RS09610: A4249_RS09610 - flagellar motor switch protein FliM, at 1,917,311 to 1,918,354
_RS09610
Position (kb) 1915
1916
1917 Strain fitness (log2 ratio) -1
0
1 at 1914.968 kb on + strand, within A4249_RS09590 at 1914.968 kb on + strand, within A4249_RS09590 at 1914.968 kb on + strand, within A4249_RS09590 at 1914.969 kb on - strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.052 kb on + strand, within A4249_RS09590 at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.053 kb on - strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.197 kb on + strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.198 kb on - strand at 1915.232 kb on + strand at 1915.232 kb on + strand at 1915.233 kb on - strand at 1915.233 kb on - strand at 1915.233 kb on - strand at 1915.233 kb on - strand at 1915.236 kb on + strand at 1915.236 kb on + strand at 1915.236 kb on + strand at 1915.236 kb on + strand at 1915.236 kb on + strand at 1915.236 kb on + strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.237 kb on - strand at 1915.257 kb on + strand at 1915.258 kb on - strand at 1915.258 kb on - strand at 1915.356 kb on + strand, within A4249_RS09595 at 1915.356 kb on + strand, within A4249_RS09595 at 1915.356 kb on + strand, within A4249_RS09595 at 1915.356 kb on + strand, within A4249_RS09595 at 1915.356 kb on + strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.357 kb on - strand, within A4249_RS09595 at 1915.396 kb on + strand, within A4249_RS09595 at 1915.397 kb on - strand, within A4249_RS09595 at 1915.519 kb on + strand at 1915.519 kb on + strand at 1915.519 kb on + strand at 1915.520 kb on - strand at 1915.566 kb on + strand at 1915.566 kb on + strand at 1915.566 kb on + strand at 1915.566 kb on + strand at 1915.566 kb on + strand at 1915.566 kb on + strand at 1915.567 kb on - strand at 1915.567 kb on - strand at 1915.567 kb on - strand at 1915.581 kb on + strand at 1915.582 kb on - strand at 1915.582 kb on - strand at 1915.582 kb on - strand at 1915.582 kb on - strand at 1915.582 kb on - strand at 1915.634 kb on + strand at 1915.634 kb on + strand at 1915.635 kb on - strand at 1915.635 kb on - strand at 1915.635 kb on - strand at 1915.665 kb on + strand at 1915.665 kb on + strand at 1915.665 kb on + strand at 1915.666 kb on - strand at 1915.666 kb on - strand at 1915.666 kb on - strand at 1915.776 kb on + strand at 1915.776 kb on + strand at 1915.777 kb on - strand at 1915.787 kb on + strand at 1915.787 kb on + strand at 1915.787 kb on + strand at 1915.787 kb on + strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.788 kb on - strand at 1915.793 kb on + strand at 1915.841 kb on + strand at 1915.841 kb on + strand at 1915.842 kb on - strand at 1915.842 kb on - strand at 1915.842 kb on - strand at 1915.842 kb on - strand at 1915.965 kb on + strand, within A4249_RS09600 at 1915.965 kb on + strand, within A4249_RS09600 at 1916.047 kb on - strand, within A4249_RS09600 at 1916.273 kb on + strand, within A4249_RS09600 at 1916.273 kb on + strand, within A4249_RS09600 at 1916.273 kb on + strand, within A4249_RS09600 at 1916.274 kb on - strand, within A4249_RS09600 at 1916.274 kb on - strand, within A4249_RS09600 at 1916.274 kb on - strand, within A4249_RS09600 at 1916.274 kb on - strand, within A4249_RS09600 at 1916.759 kb on + strand at 1916.759 kb on + strand at 1916.759 kb on + strand at 1916.759 kb on + strand at 1917.092 kb on + strand, within A4249_RS09605 at 1917.092 kb on + strand, within A4249_RS09605 at 1917.093 kb on - strand, within A4249_RS09605 at 1917.254 kb on - strand at 1917.296 kb on + strand at 1917.296 kb on + strand at 1917.297 kb on - strand at 1917.369 kb on - strand at 1917.369 kb on - strand at 1917.369 kb on - strand at 1917.658 kb on - strand, within A4249_RS09610
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 1,914,968 + A4249_RS09590 0.84 +0.1 1,914,968 + A4249_RS09590 0.84 -0.5 1,914,968 + A4249_RS09590 0.84 +0.3 1,914,969 - A4249_RS09590 0.84 -0.6 1,915,052 + A4249_RS09590 0.90 +0.6 1,915,052 + A4249_RS09590 0.90 -0.1 1,915,052 + A4249_RS09590 0.90 +0.4 1,915,052 + A4249_RS09590 0.90 -0.1 1,915,052 + A4249_RS09590 0.90 +0.1 1,915,052 + A4249_RS09590 0.90 +0.3 1,915,052 + A4249_RS09590 0.90 -0.4 1,915,052 + A4249_RS09590 0.90 -0.0 1,915,052 + A4249_RS09590 0.90 -0.1 1,915,052 + A4249_RS09590 0.90 -0.9 1,915,052 + A4249_RS09590 0.90 -0.7 1,915,052 + A4249_RS09590 0.90 +0.3 1,915,052 + A4249_RS09590 0.90 +0.6 1,915,053 - +0.1 1,915,053 - -1.3 1,915,053 - -0.3 1,915,053 - +0.1 1,915,053 - -0.2 1,915,053 - +0.6 1,915,053 - -0.4 1,915,053 - -0.7 1,915,053 - -0.6 1,915,053 - -0.1 1,915,053 - +0.6 1,915,197 + -0.4 1,915,197 + +0.3 1,915,197 + +0.1 1,915,197 + -0.1 1,915,197 + -0.8 1,915,197 + +0.1 1,915,197 + +0.1 1,915,197 + -0.5 1,915,197 + +0.1 1,915,197 + -0.1 1,915,197 + +0.2 1,915,197 + +0.1 1,915,198 - +0.2 1,915,198 - -0.1 1,915,198 - +0.5 1,915,198 - +1.5 1,915,198 - +0.6 1,915,198 - -1.4 1,915,198 - +0.7 1,915,198 - -0.3 1,915,198 - +0.2 1,915,198 - +0.5 1,915,232 + -0.9 1,915,232 + +0.1 1,915,233 - +0.4 1,915,233 - -1.0 1,915,233 - +0.0 1,915,233 - +1.1 1,915,236 + -1.2 1,915,236 + +0.4 1,915,236 + +0.3 1,915,236 + +1.3 1,915,236 + -0.9 1,915,236 + -1.1 1,915,237 - +0.3 1,915,237 - +0.3 1,915,237 - +0.2 1,915,237 - -0.1 1,915,237 - -1.0 1,915,237 - -0.3 1,915,237 - +0.2 1,915,237 - -0.2 1,915,237 - +0.0 1,915,237 - +0.5 1,915,257 + +0.6 1,915,258 - -0.6 1,915,258 - +0.2 1,915,356 + A4249_RS09595 0.48 +0.6 1,915,356 + A4249_RS09595 0.48 +0.0 1,915,356 + A4249_RS09595 0.48 -1.5 1,915,356 + A4249_RS09595 0.48 -0.2 1,915,356 + A4249_RS09595 0.48 +0.9 1,915,357 - A4249_RS09595 0.48 -0.4 1,915,357 - A4249_RS09595 0.48 -0.0 1,915,357 - A4249_RS09595 0.48 -0.0 1,915,357 - A4249_RS09595 0.48 -0.3 1,915,357 - A4249_RS09595 0.48 -0.0 1,915,357 - A4249_RS09595 0.48 +0.3 1,915,357 - A4249_RS09595 0.48 -0.1 1,915,357 - A4249_RS09595 0.48 +0.4 1,915,396 + A4249_RS09595 0.65 +0.1 1,915,397 - A4249_RS09595 0.65 -0.6 1,915,519 + +0.0 1,915,519 + +0.0 1,915,519 + -0.9 1,915,520 - +0.2 1,915,566 + -0.2 1,915,566 + -0.2 1,915,566 + +1.2 1,915,566 + +0.4 1,915,566 + +1.2 1,915,566 + +0.0 1,915,567 - -0.5 1,915,567 - +0.0 1,915,567 - -0.1 1,915,581 + -0.3 1,915,582 - +0.0 1,915,582 - +0.4 1,915,582 - -0.8 1,915,582 - +0.6 1,915,582 - +0.4 1,915,634 + +0.3 1,915,634 + +0.4 1,915,635 - +0.0 1,915,635 - -0.2 1,915,635 - +0.4 1,915,665 + -0.1 1,915,665 + +1.5 1,915,665 + +0.8 1,915,666 - +1.3 1,915,666 - +0.0 1,915,666 - -0.6 1,915,776 + -0.3 1,915,776 + -0.2 1,915,777 - +1.4 1,915,787 + -0.0 1,915,787 + -0.4 1,915,787 + -0.4 1,915,787 + -0.7 1,915,788 - +0.2 1,915,788 - +1.3 1,915,788 - -0.1 1,915,788 - +0.3 1,915,788 - -0.9 1,915,788 - -0.4 1,915,788 - -0.9 1,915,793 + +0.5 1,915,841 + -0.4 1,915,841 + +0.1 1,915,842 - +0.2 1,915,842 - -0.4 1,915,842 - -0.4 1,915,842 - -0.3 1,915,965 + A4249_RS09600 0.19 -0.6 1,915,965 + A4249_RS09600 0.19 -0.1 1,916,047 - A4249_RS09600 0.28 -0.2 1,916,273 + A4249_RS09600 0.52 -0.1 1,916,273 + A4249_RS09600 0.52 -0.7 1,916,273 + A4249_RS09600 0.52 -1.0 1,916,274 - A4249_RS09600 0.52 -0.2 1,916,274 - A4249_RS09600 0.52 +0.1 1,916,274 - A4249_RS09600 0.52 +0.5 1,916,274 - A4249_RS09600 0.52 +0.0 1,916,759 + +0.3 1,916,759 + +0.4 1,916,759 + +0.3 1,916,759 + +0.3 1,917,092 + A4249_RS09605 0.62 +1.6 1,917,092 + A4249_RS09605 0.62 +0.1 1,917,093 - A4249_RS09605 0.62 -0.1 1,917,254 - -0.2 1,917,296 + -0.1 1,917,296 + +1.0 1,917,297 - +0.1 1,917,369 - +0.6 1,917,369 - -0.2 1,917,369 - +1.2 1,917,658 - A4249_RS09610 0.33 +1.7
Or see this region's nucleotide sequence