Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07700

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
1,534,082	+		A4249_RS07695	0.22	-0.0
1,534,082	+		A4249_RS07695	0.22	+0.6
1,534,082	+		A4249_RS07695	0.22	-0.9
1,534,082	+		A4249_RS07695	0.22	+0.7
1,534,082	+		A4249_RS07695	0.22	-2.0
1,534,083	-		A4249_RS07695	0.22	+0.2
1,534,083	-		A4249_RS07695	0.22	-0.4
1,534,083	-		A4249_RS07695	0.22	-0.3
1,534,083	-		A4249_RS07695	0.22	-1.7
1,534,084	+		A4249_RS07695	0.22	+0.3
1,534,084	+		A4249_RS07695	0.22	+0.6
1,534,084	+		A4249_RS07695	0.22	+0.1
1,534,085	-		A4249_RS07695	0.22	-0.2
1,534,085	-		A4249_RS07695	0.22	-0.3
1,534,085	-		A4249_RS07695	0.22	-0.1
1,534,160	+		A4249_RS07695	0.28	-1.5
1,534,160	+		A4249_RS07695	0.28	-0.9
1,534,160	+		A4249_RS07695	0.28	-0.0
1,534,160	+		A4249_RS07695	0.28	+0.1
1,534,160	+		A4249_RS07695	0.28	+0.8
1,534,160	+		A4249_RS07695	0.28	+0.1
1,534,160	+		A4249_RS07695	0.28	+0.2
1,534,160	+		A4249_RS07695	0.28	+0.1
1,534,160	+		A4249_RS07695	0.28	+0.4
1,534,161	-		A4249_RS07695	0.28	-0.7
1,534,161	-		A4249_RS07695	0.28	+0.4
1,534,161	-		A4249_RS07695	0.28	+0.9
1,534,161	-		A4249_RS07695	0.28	-0.2
1,534,161	-		A4249_RS07695	0.28	-0.3
1,534,161	-		A4249_RS07695	0.28	-0.1
1,534,161	-		A4249_RS07695	0.28	+1.1
1,534,161	-		A4249_RS07695	0.28	-0.5
1,534,161	-		A4249_RS07695	0.28	-0.3
1,534,161	-		A4249_RS07695	0.28	-0.4
1,534,161	-		A4249_RS07695	0.28	+0.8
1,534,161	-		A4249_RS07695	0.28	-0.3
1,534,175	+		A4249_RS07695	0.30	+0.3
1,534,176	-		A4249_RS07695	0.30	+0.9
1,534,176	-		A4249_RS07695	0.30	-0.7
1,534,176	-		A4249_RS07695	0.30	+0.1
1,534,176	-		A4249_RS07695	0.30	+0.8
1,534,176	-		A4249_RS07695	0.30	-1.6
1,534,178	+		A4249_RS07695	0.30	+0.6
1,534,178	+		A4249_RS07695	0.30	-0.0
1,534,178	+		A4249_RS07695	0.30	-0.2
1,534,179	-		A4249_RS07695	0.30	+1.2
1,534,310	+		A4249_RS07695	0.41	-0.3
1,534,310	+		A4249_RS07695	0.41	+0.1
1,534,311	-		A4249_RS07695	0.41	+0.4
1,534,311	-		A4249_RS07695	0.41	+0.0
1,534,311	-		A4249_RS07695	0.41	-0.2
1,534,311	-		A4249_RS07695	0.41	+0.0
1,534,311	-		A4249_RS07695	0.41	+0.0
1,534,502	+		A4249_RS07695	0.57	+0.0
1,534,502	+		A4249_RS07695	0.57	+0.1
1,534,503	-		A4249_RS07695	0.57	-0.3
1,534,503	-		A4249_RS07695	0.57	-0.6
1,534,542	+		A4249_RS07695	0.60	+0.7
1,534,542	+		A4249_RS07695	0.60	+0.1
1,534,542	+		A4249_RS07695	0.60	-0.1
1,534,542	+		A4249_RS07695	0.60	+0.6
1,534,543	-		A4249_RS07695	0.60	+0.6
1,534,543	-		A4249_RS07695	0.60	+0.3
1,534,543	-		A4249_RS07695	0.60	+0.7
1,534,543	-		A4249_RS07695	0.60	+0.1
1,534,577	+		A4249_RS07695	0.63	-0.2
1,534,577	+		A4249_RS07695	0.63	+0.2
1,534,586	+		A4249_RS07695	0.64	-0.2
1,534,586	+		A4249_RS07695	0.64	-0.6
1,534,587	-		A4249_RS07695	0.64	+0.9
1,534,587	-		A4249_RS07695	0.64	-0.2
1,534,587	-		A4249_RS07695	0.64	-0.0
1,534,587	-		A4249_RS07695	0.64	-0.8
1,534,587	-		A4249_RS07695	0.64	+0.7
1,534,588	+		A4249_RS07695	0.64	-0.2
1,534,588	+		A4249_RS07695	0.64	-0.4
1,534,588	+		A4249_RS07695	0.64	-0.2
1,534,588	+		A4249_RS07695	0.64	+0.4
1,534,588	+		A4249_RS07695	0.64	-0.8
1,534,589	-		A4249_RS07695	0.64	-0.5
1,534,589	-		A4249_RS07695	0.64	-0.3
1,534,589	-		A4249_RS07695	0.64	-0.6
1,534,589	-		A4249_RS07695	0.64	+0.4
1,534,589	-		A4249_RS07695	0.64	+0.4
1,534,802	+		A4249_RS07695	0.82	+0.3
1,534,802	+		A4249_RS07695	0.82	-0.3
1,534,803	-		A4249_RS07695	0.82	+0.1
1,534,803	-		A4249_RS07695	0.82	+0.9
1,534,803	-		A4249_RS07695	0.82	-0.0
1,534,803	-		A4249_RS07695	0.82	-0.4
1,534,808	+		A4249_RS07695	0.83	-0.1
1,534,808	+		A4249_RS07695	0.83	+0.7
1,534,808	+		A4249_RS07695	0.83	-0.6
1,534,808	+		A4249_RS07695	0.83	-0.5
1,534,808	+		A4249_RS07695	0.83	+0.1
1,534,808	+		A4249_RS07695	0.83	+0.1
1,534,808	+		A4249_RS07695	0.83	+0.3
1,534,809	-		A4249_RS07695	0.83	+1.3
1,534,809	-		A4249_RS07695	0.83	-0.5
1,534,809	-		A4249_RS07695	0.83	-1.9
1,534,831	+		A4249_RS07695	0.85	+0.2
1,534,832	-		A4249_RS07695	0.85	+0.6
1,534,951	+				+0.3
1,534,951	+				-0.3
1,534,951	+				-0.3
1,534,951	+				-0.3
1,535,013	-				-0.1
1,535,223	-		A4249_RS07700	0.22	-1.3
1,535,444	+		A4249_RS07700	0.48	+0.8
1,535,444	+		A4249_RS07700	0.48	+0.1
1,535,444	+		A4249_RS07700	0.48	-0.6
1,535,444	+		A4249_RS07700	0.48	-0.6
1,535,444	+		A4249_RS07700	0.48	+0.1
1,535,444	+		A4249_RS07700	0.48	-0.1
1,535,445	-		A4249_RS07700	0.48	-1.0
1,535,445	-		A4249_RS07700	0.48	+0.1
1,535,445	-		A4249_RS07700	0.48	-0.4
1,535,445	-		A4249_RS07700	0.48	+0.3
1,535,445	-		A4249_RS07700	0.48	+0.1
1,535,445	-		A4249_RS07700	0.48	+0.8
1,535,445	-		A4249_RS07700	0.48	-0.2
1,535,445	-		A4249_RS07700	0.48	-0.1
1,535,445	-		A4249_RS07700	0.48	-0.5
1,535,445	-		A4249_RS07700	0.48	+0.4
1,535,483	+		A4249_RS07700	0.53	+0.6
1,535,484	-		A4249_RS07700	0.53	+0.1
1,535,484	-		A4249_RS07700	0.53	+0.4
1,535,484	-		A4249_RS07700	0.53	-0.3
1,535,484	-		A4249_RS07700	0.53	+0.4
1,535,517	-		A4249_RS07700	0.57	+0.2
1,535,671	+		A4249_RS07700	0.75	-0.5
1,535,671	+		A4249_RS07700	0.75	-0.1
1,535,671	+		A4249_RS07700	0.75	-0.2
1,535,672	-		A4249_RS07700	0.75	-0.0
1,535,711	+		A4249_RS07700	0.80	-0.1
1,535,711	+		A4249_RS07700	0.80	-0.5
1,535,712	-		A4249_RS07700	0.80	-0.3
1,535,712	-		A4249_RS07700	0.80	-0.3
1,535,712	-		A4249_RS07700	0.80	+0.1
1,535,712	-		A4249_RS07700	0.80	-0.4
1,535,712	-		A4249_RS07700	0.80	-0.0
1,535,712	-		A4249_RS07700	0.80	+0.4
1,535,712	-		A4249_RS07700	0.80	+0.2
1,535,712	-		A4249_RS07700	0.80	-0.6
1,535,712	-		A4249_RS07700	0.80	+0.8
1,535,801	+				-0.6
1,535,801	+				-0.1
1,535,801	+				-0.3
1,535,801	+				-0.2
1,535,801	+				-0.0
1,535,802	-				+0.3
1,535,802	-				-0.7
1,535,802	-				+0.5
1,535,802	-				-0.7
1,535,802	-				+0.3
1,535,890	+				-0.6
1,535,890	+				-0.6
1,535,891	-				+0.3
1,535,891	-				+1.0
1,535,946	-				+0.4
1,536,244	+		A4249_RS07705	0.48	+0.8
1,536,244	+		A4249_RS07705	0.48	+0.8
1,536,244	+		A4249_RS07705	0.48	-0.3
1,536,244	+		A4249_RS07705	0.48	-0.0
1,536,244	+		A4249_RS07705	0.48	+1.0
1,536,244	+		A4249_RS07705	0.48	+0.1
1,536,244	+		A4249_RS07705	0.48	+0.9
1,536,244	+		A4249_RS07705	0.48	+0.7
1,536,244	+		A4249_RS07705	0.48	+0.4
1,536,244	+		A4249_RS07705	0.48	+0.1
1,536,245	-		A4249_RS07705	0.48	+0.5
1,536,245	-		A4249_RS07705	0.48	+0.1
1,536,245	-		A4249_RS07705	0.48	+0.7
1,536,245	-		A4249_RS07705	0.48	-0.0
1,536,245	-		A4249_RS07705	0.48	-0.0
1,536,294	+		A4249_RS07705	0.55	-1.8
1,536,295	-		A4249_RS07705	0.55	+0.1
1,536,295	-		A4249_RS07705	0.55	-1.0
1,536,349	+		A4249_RS07705	0.62	+0.7
1,536,350	-		A4249_RS07705	0.62	+0.0
1,536,350	-		A4249_RS07705	0.62	+0.7
1,536,493	+		A4249_RS07705	0.81	-0.2
1,536,493	+		A4249_RS07705	0.81	+0.7
1,536,493	+		A4249_RS07705	0.81	-0.8
1,536,493	+		A4249_RS07705	0.81	+0.1
1,536,493	+		A4249_RS07705	0.81	-0.4
1,536,493	+		A4249_RS07705	0.81	+0.2
1,536,493	+		A4249_RS07705	0.81	-0.6
1,536,493	+		A4249_RS07705	0.81	-0.5
1,536,493	+		A4249_RS07705	0.81	-0.1
1,536,494	-		A4249_RS07705	0.81	-1.2
1,536,494	-		A4249_RS07705	0.81	-1.1
1,536,494	-		A4249_RS07705	0.81	+0.3
1,536,494	-		A4249_RS07705	0.81	+0.3
1,536,494	-		A4249_RS07705	0.81	+0.3
1,536,494	-		A4249_RS07705	0.81	+1.2
1,536,495	+		A4249_RS07705	0.82	+0.8
1,536,495	+		A4249_RS07705	0.82	+0.0
1,536,495	+		A4249_RS07705	0.82	+0.8
1,536,495	+		A4249_RS07705	0.82	-0.1
1,536,495	+		A4249_RS07705	0.82	-0.1
1,536,495	+		A4249_RS07705	0.82	-0.3
1,536,496	-		A4249_RS07705	0.82	+0.9
1,536,496	-		A4249_RS07705	0.82	-1.7
1,536,496	-		A4249_RS07705	0.82	-0.7
1,536,496	-		A4249_RS07705	0.82	+0.3
1,536,496	-		A4249_RS07705	0.82	+0.9
1,536,496	-		A4249_RS07705	0.82	+0.8
1,536,496	-		A4249_RS07705	0.82	-1.5
1,536,496	-		A4249_RS07705	0.82	-0.3
1,536,496	-		A4249_RS07705	0.82	-0.5
1,536,585	+				-0.7
1,536,585	+				-0.3
1,536,586	-				+0.0
1,536,586	-				-1.1
1,536,586	-				-1.2
1,536,628	+				-0.8
1,536,628	+				-0.1
1,536,628	+				-0.4
1,536,628	+				-0.2
1,536,628	+				-0.5
1,536,628	+				-0.1
1,536,628	+				+0.7
1,536,628	+				+0.7
1,536,628	+				-0.2
1,536,628	+				+0.0
1,536,628	+				+0.7
1,536,629	-				+0.3
1,536,629	-				-0.2
1,536,629	-				-0.1
1,536,629	-				-0.2
1,536,629	-				-0.0
1,536,629	-				-0.4
1,536,629	-				-1.4
1,536,629	-				-0.5
1,536,631	+				+0.6
1,536,631	+				+0.7
1,536,631	+				+0.5
1,536,631	+				+0.0
1,536,632	-				-0.5
1,536,632	-				-0.4
1,536,632	-				-1.2
1,536,632	-				-1.1
1,536,707	-				+0.2
1,536,778	+		A4249_RS07710	0.15	+0.4
1,536,778	+		A4249_RS07710	0.15	+0.0
1,536,778	+		A4249_RS07710	0.15	-0.5
1,536,778	+		A4249_RS07710	0.15	+0.1
1,536,778	+		A4249_RS07710	0.15	-0.5
1,536,778	+		A4249_RS07710	0.15	-0.3
1,536,778	+		A4249_RS07710	0.15	+0.8
1,536,778	+		A4249_RS07710	0.15	-0.1
1,536,779	-		A4249_RS07710	0.15	+0.7
1,536,779	-		A4249_RS07710	0.15	-0.3
1,536,779	-		A4249_RS07710	0.15	+0.2
1,536,779	-		A4249_RS07710	0.15	-0.6
1,536,779	-		A4249_RS07710	0.15	+0.4
1,536,779	-		A4249_RS07710	0.15	+0.2
1,536,793	+		A4249_RS07710	0.17	+0.0
1,536,793	+		A4249_RS07710	0.17	-1.3
1,536,793	+		A4249_RS07710	0.17	+0.0
1,536,793	+		A4249_RS07710	0.17	-1.0
1,536,793	+		A4249_RS07710	0.17	-0.2
1,536,793	+		A4249_RS07710	0.17	-0.1
1,536,793	+		A4249_RS07710	0.17	+1.3
1,536,793	+		A4249_RS07710	0.17	+0.8
1,536,793	+		A4249_RS07710	0.17	-0.1
1,536,793	+		A4249_RS07710	0.17	-0.2
1,536,793	+		A4249_RS07710	0.17	+0.3
1,536,793	+		A4249_RS07710	0.17	-0.0
1,536,793	+		A4249_RS07710	0.17	+0.4
1,536,793	+		A4249_RS07710	0.17	-0.1
1,536,793	+		A4249_RS07710	0.17	+1.8
1,536,794	-		A4249_RS07710	0.17	+0.7
1,536,794	-		A4249_RS07710	0.17	+0.2
1,536,794	-		A4249_RS07710	0.17	-0.1
1,536,794	-		A4249_RS07710	0.17	-0.3
1,536,794	-		A4249_RS07710	0.17	+0.7
1,536,794	-		A4249_RS07710	0.17	+0.1
1,536,794	-		A4249_RS07710	0.17	-0.3
1,536,804	+		A4249_RS07710	0.18	+0.4
1,536,804	+		A4249_RS07710	0.18	+0.3
1,536,804	+		A4249_RS07710	0.18	-0.0
1,536,804	+		A4249_RS07710	0.18	+0.6