Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06795

Experiment: Thymine 0.793 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06790 and A4249_RS06795 are separated by 151 nucleotidesA4249_RS06795 and A4249_RS06800 are separated by 179 nucleotides A4249_RS06790: A4249_RS06790 - beta-ketoacyl-ACP synthase II, at 1,383,660 to 1,384,931 _RS06790 A4249_RS06795: A4249_RS06795 - acyl carrier protein, at 1,385,083 to 1,385,322 _RS06795 A4249_RS06800: A4249_RS06800 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,385,502 to 1,386,242 _RS06800 Position (kb) 1385 1386Strain fitness (log2 ratio) -1 0 1 2at 1384.947 kb on - strandat 1384.947 kb on - strandat 1384.947 kb on - strandat 1385.001 kb on - strandat 1385.001 kb on - strandat 1385.001 kb on - strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1386.315 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C)
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1,384,947 - +0.2
1,384,947 - -0.3
1,384,947 - +0.9
1,385,001 - -0.2
1,385,001 - -0.3
1,385,001 - +0.1
1,385,503 + +0.2
1,385,503 + +1.9
1,385,503 + +0.8
1,385,503 + +0.2
1,385,503 + -0.4
1,385,503 + -0.7
1,385,503 + -0.7
1,385,504 - +0.1
1,385,504 - +0.3
1,385,504 - -0.0
1,385,504 - +0.1
1,385,504 - -0.2
1,386,315 + +1.0

Or see this region's nucleotide sequence