Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05440

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
1,111,385	+		A4249_RS05430	0.87	-2.0
1,111,385	+		A4249_RS05430	0.87	-0.0
1,111,386	-		A4249_RS05430	0.87	+0.9
1,111,386	-		A4249_RS05430	0.87	-0.9
1,111,422	+		A4249_RS05430	0.90	-0.6
1,111,422	+		A4249_RS05430	0.90	+0.3
1,111,422	+		A4249_RS05430	0.90	+0.2
1,111,422	+		A4249_RS05430	0.90	+0.3
1,111,422	+		A4249_RS05430	0.90	-0.5
1,111,423	-				-0.0
1,111,423	-				-0.1
1,111,473	+				+0.7
1,111,473	+				+0.9
1,111,474	-				-0.3
1,111,548	+				+0.9
1,111,548	+				+0.6
1,111,549	-				+0.9
1,111,549	-				-0.7
1,111,570	-				+0.7
1,111,570	-				+0.8
1,111,873	-		A4249_RS05435	0.41	+0.6
1,112,026	-		A4249_RS05435	0.60	+0.1
1,112,281	+				-1.6
1,112,460	+		A4249_RS05440	0.13	+1.3
1,112,460	+		A4249_RS05440	0.13	-0.6
1,112,460	+		A4249_RS05440	0.13	-0.7
1,112,460	+		A4249_RS05440	0.13	-0.2
1,112,460	+		A4249_RS05440	0.13	-0.0
1,112,460	+		A4249_RS05440	0.13	+0.9
1,112,460	+		A4249_RS05440	0.13	+0.5
1,112,460	+		A4249_RS05440	0.13	-0.0
1,112,460	+		A4249_RS05440	0.13	+0.2
1,112,461	-		A4249_RS05440	0.13	-1.4
1,112,461	-		A4249_RS05440	0.13	+0.2
1,112,461	-		A4249_RS05440	0.13	-0.2
1,112,461	-		A4249_RS05440	0.13	+1.6
1,112,461	-		A4249_RS05440	0.13	-0.9
1,112,461	-		A4249_RS05440	0.13	+0.5
1,112,461	-		A4249_RS05440	0.13	-0.2
1,112,461	-		A4249_RS05440	0.13	+0.3
1,112,461	-		A4249_RS05440	0.13	-0.2
1,112,461	-		A4249_RS05440	0.13	+1.6
1,112,498	+		A4249_RS05440	0.17	-0.7
1,112,498	+		A4249_RS05440	0.17	+1.1
1,112,498	+		A4249_RS05440	0.17	+1.2
1,112,499	-		A4249_RS05440	0.17	-0.2
1,112,568	+		A4249_RS05440	0.25	+0.0
1,112,613	-		A4249_RS05440	0.30	+0.3
1,112,613	-		A4249_RS05440	0.30	-0.1
1,112,613	-		A4249_RS05440	0.30	+0.1
1,112,613	-		A4249_RS05440	0.30	-0.2
1,112,632	+		A4249_RS05440	0.32	-0.8
1,112,632	+		A4249_RS05440	0.32	-0.3
1,112,632	+		A4249_RS05440	0.32	-0.5
1,112,632	+		A4249_RS05440	0.32	-2.0
1,112,633	-		A4249_RS05440	0.32	+0.3
1,112,633	-		A4249_RS05440	0.32	-0.0
1,112,633	-		A4249_RS05440	0.32	-0.9
1,112,633	-		A4249_RS05440	0.32	-0.6
1,112,642	+		A4249_RS05440	0.33	-0.3
1,112,642	+		A4249_RS05440	0.33	+0.5
1,112,643	-		A4249_RS05440	0.33	-0.4
1,112,643	-		A4249_RS05440	0.33	-1.0
1,112,643	-		A4249_RS05440	0.33	-0.0
1,112,643	-		A4249_RS05440	0.33	+0.0
1,112,643	-		A4249_RS05440	0.33	-0.2
1,112,643	-		A4249_RS05440	0.33	-0.5
1,112,643	-		A4249_RS05440	0.33	+0.4
1,112,675	+		A4249_RS05440	0.37	+0.7
1,112,675	+		A4249_RS05440	0.37	-0.4
1,112,675	+		A4249_RS05440	0.37	-0.2
1,112,675	+		A4249_RS05440	0.37	+1.1
1,112,675	+		A4249_RS05440	0.37	+0.8
1,112,675	+		A4249_RS05440	0.37	-0.3
1,112,676	-		A4249_RS05440	0.37	-0.8
1,112,676	-		A4249_RS05440	0.37	+0.0
1,112,676	-		A4249_RS05440	0.37	-0.6
1,112,676	-		A4249_RS05440	0.37	+0.2
1,112,676	-		A4249_RS05440	0.37	-0.7
1,112,830	-		A4249_RS05440	0.54	+0.3
1,112,831	+		A4249_RS05440	0.54	+0.2
1,112,832	-		A4249_RS05440	0.54	-0.1
1,112,832	-		A4249_RS05440	0.54	+0.7
1,112,832	-		A4249_RS05440	0.54	+0.6
1,112,832	-		A4249_RS05440	0.54	-0.3
1,113,014	+		A4249_RS05440	0.74	+0.6
1,113,014	+		A4249_RS05440	0.74	+0.4
1,113,143	+		A4249_RS05440	0.88	-0.3
1,113,143	+		A4249_RS05440	0.88	+0.2
1,113,143	+		A4249_RS05440	0.88	-0.8
1,113,144	-		A4249_RS05440	0.88	-0.3
1,113,194	+				-0.6
1,113,194	+				-0.7
1,113,194	+				-1.3
1,113,194	+				-0.2
1,113,195	-				-0.6
1,113,195	-				+0.3
1,113,195	-				+0.3
1,113,265	-				+1.4
1,113,265	-				+0.4
1,113,265	-				-0.2
1,113,419	+		A4249_RS05445	0.11	+1.1
1,113,419	+		A4249_RS05445	0.11	-0.8
1,113,419	+		A4249_RS05445	0.11	-1.6
1,113,420	-		A4249_RS05445	0.11	-0.5
1,113,420	-		A4249_RS05445	0.11	-1.3
1,113,526	+		A4249_RS05445	0.19	-0.2
1,113,697	-		A4249_RS05445	0.32	+0.8
1,113,697	-		A4249_RS05445	0.32	-0.0
1,113,697	-		A4249_RS05445	0.32	+0.3
1,113,717	+		A4249_RS05445	0.34	-0.5
1,113,717	+		A4249_RS05445	0.34	-0.1
1,113,717	+		A4249_RS05445	0.34	+0.7
1,113,717	+		A4249_RS05445	0.34	+0.6
1,113,717	+		A4249_RS05445	0.34	-0.1
1,113,717	+		A4249_RS05445	0.34	+0.2
1,113,717	+		A4249_RS05445	0.34	-0.5
1,113,717	+		A4249_RS05445	0.34	-1.2
1,113,717	+		A4249_RS05445	0.34	+0.1
1,113,717	+		A4249_RS05445	0.34	+0.4
1,113,717	+		A4249_RS05445	0.34	+0.6
1,113,717	+		A4249_RS05445	0.34	-0.9
1,113,717	+		A4249_RS05445	0.34	+0.4
1,113,717	+		A4249_RS05445	0.34	-0.1
1,113,717	+		A4249_RS05445	0.34	-0.2
1,113,717	+		A4249_RS05445	0.34	-0.0
1,113,717	+		A4249_RS05445	0.34	+0.1
1,113,717	+		A4249_RS05445	0.34	-0.3
1,113,717	+		A4249_RS05445	0.34	+0.9
1,113,718	-		A4249_RS05445	0.34	-0.3
1,113,718	-		A4249_RS05445	0.34	-1.1
1,113,718	-		A4249_RS05445	0.34	-0.6
1,113,718	-		A4249_RS05445	0.34	-0.7
1,113,718	-		A4249_RS05445	0.34	-0.1
1,113,718	-		A4249_RS05445	0.34	-1.6
1,113,718	-		A4249_RS05445	0.34	+0.3
1,113,718	-		A4249_RS05445	0.34	-0.3
1,113,718	-		A4249_RS05445	0.34	+0.2
1,113,718	-		A4249_RS05445	0.34	-0.2
1,113,718	-		A4249_RS05445	0.34	-1.1
1,113,718	-		A4249_RS05445	0.34	-0.5
1,113,718	-		A4249_RS05445	0.34	-0.2
1,113,719	+		A4249_RS05445	0.34	-0.1
1,113,719	+		A4249_RS05445	0.34	+0.4
1,113,719	+		A4249_RS05445	0.34	-0.2
1,113,719	+		A4249_RS05445	0.34	+0.1
1,113,719	+		A4249_RS05445	0.34	-0.5
1,113,719	+		A4249_RS05445	0.34	-0.6
1,113,720	-		A4249_RS05445	0.34	-0.0
1,113,720	-		A4249_RS05445	0.34	-0.6
1,113,720	-		A4249_RS05445	0.34	+0.0
1,113,720	-		A4249_RS05445	0.34	+0.6
1,113,720	-		A4249_RS05445	0.34	-0.6
1,113,720	-		A4249_RS05445	0.34	+0.6
1,113,720	-		A4249_RS05445	0.34	-0.4
1,113,720	-		A4249_RS05445	0.34	+0.4
1,113,986	+		A4249_RS05445	0.54	-0.0
1,113,986	+		A4249_RS05445	0.54	+0.6
1,113,986	+		A4249_RS05445	0.54	-0.4
1,113,987	-		A4249_RS05445	0.54	-0.4
1,114,142	+		A4249_RS05445	0.66	-0.9
1,114,142	+		A4249_RS05445	0.66	-0.8
1,114,142	+		A4249_RS05445	0.66	-0.7
1,114,142	+		A4249_RS05445	0.66	-1.2
1,114,143	-		A4249_RS05445	0.66	-0.3
1,114,143	-		A4249_RS05445	0.66	-1.1
1,114,143	-		A4249_RS05445	0.66	+0.0
1,114,143	-		A4249_RS05445	0.66	-0.3
1,114,143	-		A4249_RS05445	0.66	+0.4
1,114,143	-		A4249_RS05445	0.66	-0.0
1,114,181	+		A4249_RS05445	0.69	-0.0
1,114,181	+		A4249_RS05445	0.69	+0.0
1,114,182	-		A4249_RS05445	0.69	-0.1