Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03885 and A4249_RS03890 are separated by 10 nucleotides A4249_RS03890 and A4249_RS03895 are separated by 98 nucleotides
A4249_RS03885: A4249_RS03885 - GNAT family N-acetyltransferase, at 818,271 to 819,431
_RS03885
A4249_RS03890: A4249_RS03890 - transcriptional regulator, at 819,442 to 820,356
_RS03890
A4249_RS03895: A4249_RS03895 - DUF2807 domain-containing protein, at 820,455 to 821,342
_RS03895
Position (kb) 819
820
821 Strain fitness (log2 ratio) -2
-1
0
1 at 818.530 kb on - strand, within A4249_RS03885 at 818.530 kb on - strand, within A4249_RS03885 at 818.685 kb on + strand, within A4249_RS03885 at 818.686 kb on - strand, within A4249_RS03885 at 818.727 kb on + strand, within A4249_RS03885 at 818.728 kb on - strand, within A4249_RS03885 at 818.728 kb on - strand, within A4249_RS03885 at 819.016 kb on - strand, within A4249_RS03885 at 819.016 kb on - strand, within A4249_RS03885 at 819.036 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.150 kb on + strand, within A4249_RS03885 at 819.151 kb on - strand, within A4249_RS03885 at 819.151 kb on - strand, within A4249_RS03885 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.589 kb on + strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.590 kb on - strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.595 kb on + strand, within A4249_RS03890 at 819.596 kb on - strand, within A4249_RS03890 at 819.596 kb on - strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.772 kb on + strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.773 kb on - strand, within A4249_RS03890 at 819.841 kb on + strand, within A4249_RS03890 at 819.842 kb on - strand, within A4249_RS03890 at 819.842 kb on - strand, within A4249_RS03890 at 819.905 kb on - strand, within A4249_RS03890 at 819.905 kb on - strand, within A4249_RS03890 at 819.939 kb on + strand, within A4249_RS03890 at 819.940 kb on - strand, within A4249_RS03890 at 819.940 kb on - strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.982 kb on + strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 819.983 kb on - strand, within A4249_RS03890 at 820.054 kb on + strand, within A4249_RS03890 at 820.054 kb on + strand, within A4249_RS03890 at 820.055 kb on - strand, within A4249_RS03890 at 820.275 kb on + strand at 820.275 kb on + strand at 820.276 kb on - strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.354 kb on + strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.355 kb on - strand at 820.368 kb on + strand at 820.368 kb on + strand at 820.369 kb on - strand at 820.369 kb on - strand at 820.392 kb on + strand at 820.393 kb on - strand at 821.340 kb on + strand at 821.340 kb on + strand at 821.341 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 818,530 - A4249_RS03885 0.22 +0.2 818,530 - A4249_RS03885 0.22 +1.6 818,685 + A4249_RS03885 0.36 -0.7 818,686 - A4249_RS03885 0.36 +0.2 818,727 + A4249_RS03885 0.39 +0.4 818,728 - A4249_RS03885 0.39 +0.1 818,728 - A4249_RS03885 0.39 +0.5 819,016 - A4249_RS03885 0.64 -0.8 819,016 - A4249_RS03885 0.64 +0.6 819,036 + A4249_RS03885 0.66 -1.2 819,150 + A4249_RS03885 0.76 -0.6 819,150 + A4249_RS03885 0.76 -1.8 819,150 + A4249_RS03885 0.76 +0.2 819,151 - A4249_RS03885 0.76 -0.1 819,151 - A4249_RS03885 0.76 +1.1 819,589 + A4249_RS03890 0.16 +0.1 819,589 + A4249_RS03890 0.16 +0.6 819,589 + A4249_RS03890 0.16 +0.2 819,589 + A4249_RS03890 0.16 -1.2 819,589 + A4249_RS03890 0.16 +0.7 819,590 - A4249_RS03890 0.16 -0.3 819,590 - A4249_RS03890 0.16 -0.4 819,590 - A4249_RS03890 0.16 +0.2 819,590 - A4249_RS03890 0.16 -0.1 819,590 - A4249_RS03890 0.16 +0.1 819,590 - A4249_RS03890 0.16 +1.0 819,590 - A4249_RS03890 0.16 -0.2 819,595 + A4249_RS03890 0.17 +0.3 819,595 + A4249_RS03890 0.17 +0.3 819,595 + A4249_RS03890 0.17 -0.1 819,595 + A4249_RS03890 0.17 +0.8 819,596 - A4249_RS03890 0.17 -0.3 819,596 - A4249_RS03890 0.17 +0.3 819,772 + A4249_RS03890 0.36 -0.1 819,772 + A4249_RS03890 0.36 -0.6 819,772 + A4249_RS03890 0.36 -0.1 819,772 + A4249_RS03890 0.36 -1.0 819,772 + A4249_RS03890 0.36 +0.6 819,772 + A4249_RS03890 0.36 +0.4 819,773 - A4249_RS03890 0.36 -0.2 819,773 - A4249_RS03890 0.36 +0.4 819,773 - A4249_RS03890 0.36 -1.5 819,773 - A4249_RS03890 0.36 +0.6 819,841 + A4249_RS03890 0.44 -0.9 819,842 - A4249_RS03890 0.44 -0.4 819,842 - A4249_RS03890 0.44 -0.6 819,905 - A4249_RS03890 0.51 +0.6 819,905 - A4249_RS03890 0.51 +0.3 819,939 + A4249_RS03890 0.54 +0.5 819,940 - A4249_RS03890 0.54 +0.2 819,940 - A4249_RS03890 0.54 +1.2 819,982 + A4249_RS03890 0.59 +0.1 819,982 + A4249_RS03890 0.59 -0.3 819,982 + A4249_RS03890 0.59 -0.8 819,982 + A4249_RS03890 0.59 +0.3 819,982 + A4249_RS03890 0.59 +0.3 819,982 + A4249_RS03890 0.59 +0.6 819,983 - A4249_RS03890 0.59 -0.3 819,983 - A4249_RS03890 0.59 +0.1 819,983 - A4249_RS03890 0.59 +0.7 820,054 + A4249_RS03890 0.67 +0.1 820,054 + A4249_RS03890 0.67 +0.2 820,055 - A4249_RS03890 0.67 +1.1 820,275 + +0.3 820,275 + +0.2 820,276 - +0.3 820,354 + -0.6 820,354 + +0.0 820,354 + -0.1 820,354 + +1.1 820,354 + +0.5 820,355 - -0.0 820,355 - -0.7 820,355 - -0.4 820,355 - -0.6 820,368 + +0.9 820,368 + +0.5 820,369 - +0.4 820,369 - +0.2 820,392 + -0.2 820,393 - -0.1 821,340 + -0.5 821,340 + -1.3 821,341 - -0.1
Or see this region's nucleotide sequence