Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03310 and A4249_RS03315 are separated by 8 nucleotides A4249_RS03315 and A4249_RS03320 overlap by 4 nucleotides A4249_RS03320 and A4249_RS03325 are separated by 117 nucleotides A4249_RS03325 and A4249_RS03330 are separated by 89 nucleotides A4249_RS03330 and A4249_RS03335 are separated by 50 nucleotides
A4249_RS03310: A4249_RS03310 - RNA polymerase sigma factor, at 696,796 to 697,374
_RS03310
A4249_RS03315: A4249_RS03315 - periplasmic heavy metal sensor, at 697,383 to 697,823
_RS03315
A4249_RS03320: A4249_RS03320 - hypothetical protein, at 697,820 to 698,101
_RS03320
A4249_RS03325: A4249_RS03325 - hypothetical protein, at 698,219 to 698,869
_RS03325
A4249_RS03330: A4249_RS03330 - nuclear transport factor 2 family protein, at 698,959 to 699,426
_RS03330
A4249_RS03335: A4249_RS03335 - DUF411 domain-containing protein, at 699,477 to 699,950
_RS03335
Position (kb) 698
699 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.265 kb on + strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310 at 697.384 kb on + strand at 698.092 kb on + strand at 698.092 kb on + strand at 698.092 kb on + strand at 698.123 kb on + strand at 698.123 kb on + strand at 698.123 kb on + strand at 698.123 kb on + strand at 698.124 kb on - strand at 698.124 kb on - strand at 698.124 kb on - strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.131 kb on - strand at 698.131 kb on - strand at 698.131 kb on - strand at 698.131 kb on - strand at 698.131 kb on - strand at 698.131 kb on - strand at 698.133 kb on + strand at 698.134 kb on - strand at 698.134 kb on - strand at 698.134 kb on - strand at 698.185 kb on + strand at 698.185 kb on + strand at 698.185 kb on + strand at 698.185 kb on + strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.186 kb on - strand at 698.189 kb on + strand at 698.189 kb on + strand at 698.190 kb on - strand at 698.190 kb on - strand at 698.190 kb on - strand at 698.218 kb on + strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.450 kb on + strand, within A4249_RS03325 at 698.450 kb on + strand, within A4249_RS03325 at 698.451 kb on - strand, within A4249_RS03325 at 698.451 kb on - strand, within A4249_RS03325 at 698.716 kb on + strand, within A4249_RS03325 at 698.716 kb on + strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.717 kb on - strand, within A4249_RS03325 at 698.774 kb on + strand, within A4249_RS03325 at 698.774 kb on + strand, within A4249_RS03325 at 698.775 kb on - strand, within A4249_RS03325 at 698.775 kb on - strand, within A4249_RS03325 at 698.775 kb on - strand, within A4249_RS03325 at 698.775 kb on - strand, within A4249_RS03325 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.065 kb on - strand, within A4249_RS03330 at 699.166 kb on + strand, within A4249_RS03330 at 699.166 kb on + strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.258 kb on + strand, within A4249_RS03330 at 699.259 kb on - strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.287 kb on - strand, within A4249_RS03330 at 699.287 kb on - strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.386 kb on + strand at 699.387 kb on - strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.591 kb on + strand, within A4249_RS03335 at 699.591 kb on + strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 697,220 + A4249_RS03310 0.73 +0.3 697,220 + A4249_RS03310 0.73 -0.9 697,220 + A4249_RS03310 0.73 -1.5 697,220 + A4249_RS03310 0.73 -0.2 697,220 + A4249_RS03310 0.73 +1.4 697,220 + A4249_RS03310 0.73 +0.7 697,220 + A4249_RS03310 0.73 +1.0 697,220 + A4249_RS03310 0.73 +0.3 697,221 - A4249_RS03310 0.73 +1.4 697,221 - A4249_RS03310 0.73 +0.6 697,221 - A4249_RS03310 0.73 -0.2 697,221 - A4249_RS03310 0.73 -0.0 697,221 - A4249_RS03310 0.73 -0.4 697,221 - A4249_RS03310 0.73 +0.1 697,221 - A4249_RS03310 0.73 +0.1 697,265 + A4249_RS03310 0.81 +0.4 697,266 - A4249_RS03310 0.81 +1.4 697,266 - A4249_RS03310 0.81 -0.6 697,266 - A4249_RS03310 0.81 +0.1 697,384 + +0.6 698,092 + +0.2 698,092 + -0.7 698,092 + +0.9 698,123 + -1.0 698,123 + -0.5 698,123 + -0.7 698,123 + +0.8 698,124 - -1.2 698,124 - +0.3 698,124 - -0.5 698,130 + +0.8 698,130 + -1.4 698,130 + +0.1 698,130 + -0.0 698,130 + -0.0 698,130 + +2.4 698,131 - +0.1 698,131 - -0.4 698,131 - +0.7 698,131 - +0.0 698,131 - +0.4 698,131 - +0.6 698,133 + -0.6 698,134 - +0.1 698,134 - +0.3 698,134 - -0.8 698,185 + -1.2 698,185 + +1.0 698,185 + +0.0 698,185 + +0.8 698,186 - +1.3 698,186 - -0.4 698,186 - -0.0 698,186 - -1.1 698,186 - -0.2 698,186 - -0.4 698,186 - -0.5 698,186 - -0.5 698,186 - +0.2 698,189 + -0.3 698,189 + +1.0 698,190 - +0.7 698,190 - -0.1 698,190 - +0.7 698,218 + -0.1 698,219 - +0.5 698,219 - +0.4 698,450 + A4249_RS03325 0.35 -0.1 698,450 + A4249_RS03325 0.35 +0.4 698,451 - A4249_RS03325 0.36 +0.4 698,451 - A4249_RS03325 0.36 -0.1 698,716 + A4249_RS03325 0.76 -0.6 698,716 + A4249_RS03325 0.76 +0.2 698,717 - A4249_RS03325 0.76 +0.5 698,717 - A4249_RS03325 0.76 -1.3 698,717 - A4249_RS03325 0.76 -0.6 698,717 - A4249_RS03325 0.76 +0.3 698,717 - A4249_RS03325 0.76 -0.4 698,717 - A4249_RS03325 0.76 -2.8 698,774 + A4249_RS03325 0.85 +0.2 698,774 + A4249_RS03325 0.85 +0.3 698,775 - A4249_RS03325 0.85 +0.5 698,775 - A4249_RS03325 0.85 -0.8 698,775 - A4249_RS03325 0.85 -0.5 698,775 - A4249_RS03325 0.85 -0.6 699,064 + A4249_RS03330 0.22 +0.2 699,064 + A4249_RS03330 0.22 -0.1 699,064 + A4249_RS03330 0.22 +0.5 699,064 + A4249_RS03330 0.22 +0.5 699,065 - A4249_RS03330 0.23 +0.9 699,166 + A4249_RS03330 0.44 -0.1 699,166 + A4249_RS03330 0.44 -2.9 699,167 - A4249_RS03330 0.44 -0.3 699,167 - A4249_RS03330 0.44 +0.3 699,167 - A4249_RS03330 0.44 -1.5 699,169 + A4249_RS03330 0.45 -1.5 699,169 + A4249_RS03330 0.45 -1.0 699,169 + A4249_RS03330 0.45 +0.2 699,169 + A4249_RS03330 0.45 -0.6 699,169 + A4249_RS03330 0.45 +0.5 699,169 + A4249_RS03330 0.45 -0.4 699,169 + A4249_RS03330 0.45 -0.1 699,170 - A4249_RS03330 0.45 -0.4 699,170 - A4249_RS03330 0.45 -0.7 699,170 - A4249_RS03330 0.45 +0.2 699,170 - A4249_RS03330 0.45 -0.5 699,170 - A4249_RS03330 0.45 +0.0 699,170 - A4249_RS03330 0.45 -0.0 699,170 - A4249_RS03330 0.45 +1.2 699,258 + A4249_RS03330 0.64 +1.0 699,259 - A4249_RS03330 0.64 -1.2 699,280 + A4249_RS03330 0.69 +0.7 699,280 + A4249_RS03330 0.69 +0.5 699,280 + A4249_RS03330 0.69 -1.4 699,280 + A4249_RS03330 0.69 -0.2 699,280 + A4249_RS03330 0.69 +0.4 699,280 + A4249_RS03330 0.69 -0.5 699,280 + A4249_RS03330 0.69 +1.3 699,281 - A4249_RS03330 0.69 +0.6 699,281 - A4249_RS03330 0.69 +0.8 699,281 - A4249_RS03330 0.69 -0.3 699,281 - A4249_RS03330 0.69 +0.2 699,281 - A4249_RS03330 0.69 +0.3 699,281 - A4249_RS03330 0.69 -0.7 699,281 - A4249_RS03330 0.69 +0.0 699,281 - A4249_RS03330 0.69 -0.4 699,281 - A4249_RS03330 0.69 -0.1 699,281 - A4249_RS03330 0.69 +0.6 699,281 - A4249_RS03330 0.69 -0.3 699,281 - A4249_RS03330 0.69 -0.2 699,286 + A4249_RS03330 0.70 +0.4 699,286 + A4249_RS03330 0.70 +0.0 699,286 + A4249_RS03330 0.70 -0.0 699,286 + A4249_RS03330 0.70 -0.0 699,286 + A4249_RS03330 0.70 -0.4 699,286 + A4249_RS03330 0.70 +0.2 699,286 + A4249_RS03330 0.70 -1.0 699,287 - A4249_RS03330 0.70 +0.8 699,287 - A4249_RS03330 0.70 -0.2 699,323 + A4249_RS03330 0.78 -1.2 699,323 + A4249_RS03330 0.78 +0.6 699,323 + A4249_RS03330 0.78 -0.5 699,324 - A4249_RS03330 0.78 -0.4 699,324 - A4249_RS03330 0.78 -1.8 699,324 - A4249_RS03330 0.78 -0.4 699,386 + -1.2 699,387 - +0.8 699,388 + -0.3 699,388 + +0.1 699,388 + +0.2 699,388 + -0.2 699,388 + +0.0 699,388 + +0.3 699,388 + -0.1 699,388 + -0.2 699,388 + -0.2 699,388 + -0.6 699,388 + -0.6 699,388 + -0.3 699,388 + +0.2 699,388 + +0.0 699,388 + +0.2 699,388 + +0.7 699,388 + -1.1 699,389 - +0.1 699,389 - +0.0 699,389 - -2.4 699,389 - +0.0 699,389 - +0.1 699,389 - +0.6 699,389 - +0.1 699,389 - -0.0 699,389 - -1.6 699,389 - +0.1 699,389 - +0.1 699,389 - -0.1 699,389 - +0.0 699,591 + A4249_RS03335 0.24 -0.7 699,591 + A4249_RS03335 0.24 -2.0 699,592 - A4249_RS03335 0.24 -0.1 699,592 - A4249_RS03335 0.24 -0.4 699,592 - A4249_RS03335 0.24 +0.3 699,592 - A4249_RS03335 0.24 +0.0 699,592 - A4249_RS03335 0.24 +0.8 699,753 + A4249_RS03335 0.58 -0.2 699,753 + A4249_RS03335 0.58 -0.0 699,753 + A4249_RS03335 0.58 -0.3 699,753 + A4249_RS03335 0.58 -0.1 699,753 + A4249_RS03335 0.58 -0.8 699,753 + A4249_RS03335 0.58 -0.6 699,754 - A4249_RS03335 0.58 +0.6 699,754 - A4249_RS03335 0.58 -0.7 699,754 - A4249_RS03335 0.58 -0.2 699,754 - A4249_RS03335 0.58 -0.4 699,754 - A4249_RS03335 0.58 -1.1
Or see this region's nucleotide sequence