Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03110 and A4249_RS03115 overlap by 4 nucleotides A4249_RS03115 and A4249_RS03120 are separated by 157 nucleotides A4249_RS03120 and A4249_RS03125 overlap by 4 nucleotides A4249_RS03125 and A4249_RS03130 are separated by 68 nucleotides
A4249_RS03110: A4249_RS03110 - MAPEG family protein, at 657,731 to 658,273
_RS03110
A4249_RS03115: A4249_RS03115 - signal peptidase II, at 658,270 to 658,794
_RS03115
A4249_RS03120: A4249_RS03120 - cation transporter, at 658,952 to 659,602
_RS03120
A4249_RS03125: A4249_RS03125 - class I SAM-dependent methyltransferase, at 659,599 to 660,249
_RS03125
A4249_RS03130: A4249_RS03130 - hypothetical protein, at 660,318 to 660,647
_RS03130
Position (kb) 658
659
660 Strain fitness (log2 ratio) -2
-1
0
1 at 658.017 kb on + strand, within A4249_RS03110 at 658.122 kb on + strand, within A4249_RS03110 at 658.185 kb on - strand, within A4249_RS03110 at 658.185 kb on - strand, within A4249_RS03110 at 658.515 kb on + strand, within A4249_RS03115 at 658.515 kb on + strand, within A4249_RS03115 at 658.833 kb on - strand at 658.836 kb on + strand at 658.837 kb on - strand at 658.839 kb on + strand at 658.840 kb on - strand at 658.840 kb on - strand at 659.068 kb on + strand, within A4249_RS03120 at 659.069 kb on - strand, within A4249_RS03120 at 659.171 kb on + strand, within A4249_RS03120 at 659.171 kb on + strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.172 kb on - strand, within A4249_RS03120 at 659.277 kb on - strand, within A4249_RS03120 at 659.631 kb on + strand at 659.631 kb on + strand at 659.631 kb on + strand at 659.631 kb on + strand at 659.631 kb on + strand at 659.632 kb on - strand at 659.632 kb on - strand at 659.632 kb on - strand at 659.632 kb on - strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.650 kb on + strand at 659.651 kb on - strand at 659.651 kb on - strand at 659.651 kb on - strand at 659.651 kb on - strand at 659.651 kb on - strand at 660.053 kb on - strand, within A4249_RS03125 at 660.112 kb on + strand, within A4249_RS03125 at 660.112 kb on + strand, within A4249_RS03125 at 660.150 kb on + strand, within A4249_RS03125 at 660.151 kb on - strand, within A4249_RS03125 at 660.277 kb on + strand at 660.278 kb on - strand at 660.278 kb on - strand at 660.305 kb on + strand at 660.305 kb on + strand at 660.306 kb on - strand at 660.306 kb on - strand at 660.306 kb on - strand at 660.306 kb on - strand at 660.447 kb on - strand, within A4249_RS03130
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 658,017 + A4249_RS03110 0.53 +0.8 658,122 + A4249_RS03110 0.72 -0.5 658,185 - A4249_RS03110 0.84 +0.4 658,185 - A4249_RS03110 0.84 +0.4 658,515 + A4249_RS03115 0.47 +0.4 658,515 + A4249_RS03115 0.47 +0.5 658,833 - -0.6 658,836 + +0.5 658,837 - -0.3 658,839 + -0.2 658,840 - -0.0 658,840 - -0.4 659,068 + A4249_RS03120 0.18 +0.5 659,069 - A4249_RS03120 0.18 +0.6 659,171 + A4249_RS03120 0.34 +0.5 659,171 + A4249_RS03120 0.34 -0.1 659,172 - A4249_RS03120 0.34 +0.2 659,172 - A4249_RS03120 0.34 -1.5 659,172 - A4249_RS03120 0.34 +0.2 659,172 - A4249_RS03120 0.34 +0.2 659,172 - A4249_RS03120 0.34 -0.5 659,172 - A4249_RS03120 0.34 +0.6 659,172 - A4249_RS03120 0.34 -0.3 659,172 - A4249_RS03120 0.34 +0.2 659,277 - A4249_RS03120 0.50 +0.6 659,631 + -0.0 659,631 + -0.0 659,631 + -0.2 659,631 + +0.4 659,631 + -2.0 659,632 - -0.3 659,632 - -0.4 659,632 - -1.1 659,632 - +0.2 659,650 + -0.0 659,650 + +0.2 659,650 + -1.4 659,650 + +1.3 659,650 + +0.4 659,650 + +0.2 659,650 + -0.4 659,651 - -0.6 659,651 - -0.2 659,651 - +0.8 659,651 - -0.1 659,651 - -0.3 660,053 - A4249_RS03125 0.70 +0.1 660,112 + A4249_RS03125 0.79 +0.6 660,112 + A4249_RS03125 0.79 +0.0 660,150 + A4249_RS03125 0.85 +0.3 660,151 - A4249_RS03125 0.85 -0.0 660,277 + +0.0 660,278 - +0.2 660,278 - +0.0 660,305 + -0.4 660,305 + -0.3 660,306 - -0.2 660,306 - -0.2 660,306 - +0.4 660,306 - -0.4 660,447 - A4249_RS03130 0.39 -0.1
Or see this region's nucleotide sequence