Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02185 and A4249_RS02190 are separated by 81 nucleotides A4249_RS02190 and A4249_RS02195 are separated by 21 nucleotides A4249_RS02195 and A4249_RS02200 overlap by 4 nucleotides
A4249_RS02185: A4249_RS02185 - polysaccharide biosynthesis tyrosine autokinase, at 459,637 to 461,829
_RS02185
A4249_RS02190: A4249_RS02190 - outer membrane beta-barrel protein, at 461,911 to 463,194
_RS02190
A4249_RS02195: A4249_RS02195 - SDR family NAD(P)-dependent oxidoreductase, at 463,216 to 464,193
_RS02195
A4249_RS02200: A4249_RS02200 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 464,190 to 465,512
_RS02200
Position (kb) 461
462
463
464 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 461.078 kb on + strand, within A4249_RS02185 at 461.078 kb on + strand, within A4249_RS02185 at 461.078 kb on + strand, within A4249_RS02185 at 461.079 kb on - strand, within A4249_RS02185 at 461.079 kb on - strand, within A4249_RS02185 at 461.079 kb on - strand, within A4249_RS02185 at 461.264 kb on + strand, within A4249_RS02185 at 461.339 kb on + strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.340 kb on - strand, within A4249_RS02185 at 461.497 kb on + strand, within A4249_RS02185 at 461.497 kb on + strand, within A4249_RS02185 at 461.498 kb on - strand, within A4249_RS02185 at 461.498 kb on - strand, within A4249_RS02185 at 461.631 kb on + strand at 461.631 kb on + strand at 461.632 kb on - strand at 461.632 kb on - strand at 461.632 kb on - strand at 461.658 kb on + strand at 461.658 kb on + strand at 461.659 kb on - strand at 461.659 kb on - strand at 461.660 kb on + strand at 461.660 kb on + strand at 461.660 kb on + strand at 461.660 kb on + strand at 461.660 kb on + strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.661 kb on - strand at 461.872 kb on + strand at 461.872 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.954 kb on + strand at 461.955 kb on - strand at 461.955 kb on - strand at 461.955 kb on - strand at 461.955 kb on - strand at 461.955 kb on - strand at 461.955 kb on - strand at 461.996 kb on + strand at 461.996 kb on + strand at 461.996 kb on + strand at 461.997 kb on - strand at 461.997 kb on - strand at 461.997 kb on - strand at 462.092 kb on + strand, within A4249_RS02190 at 462.092 kb on + strand, within A4249_RS02190 at 462.092 kb on + strand, within A4249_RS02190 at 462.092 kb on + strand, within A4249_RS02190 at 462.093 kb on - strand, within A4249_RS02190 at 462.335 kb on + strand, within A4249_RS02190 at 462.335 kb on + strand, within A4249_RS02190 at 462.335 kb on + strand, within A4249_RS02190 at 462.336 kb on - strand, within A4249_RS02190 at 462.336 kb on - strand, within A4249_RS02190 at 462.336 kb on - strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.370 kb on + strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.371 kb on - strand, within A4249_RS02190 at 462.444 kb on - strand, within A4249_RS02190 at 462.500 kb on + strand, within A4249_RS02190 at 462.501 kb on - strand, within A4249_RS02190 at 462.593 kb on + strand, within A4249_RS02190 at 462.593 kb on + strand, within A4249_RS02190 at 462.593 kb on + strand, within A4249_RS02190 at 462.594 kb on - strand, within A4249_RS02190 at 462.740 kb on + strand, within A4249_RS02190 at 462.740 kb on + strand, within A4249_RS02190 at 462.741 kb on - strand, within A4249_RS02190 at 462.741 kb on - strand, within A4249_RS02190 at 462.741 kb on - strand, within A4249_RS02190 at 462.741 kb on - strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.963 kb on + strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 462.964 kb on - strand, within A4249_RS02190 at 463.040 kb on + strand, within A4249_RS02190 at 463.064 kb on - strand, within A4249_RS02190 at 463.230 kb on - strand at 463.325 kb on + strand, within A4249_RS02195
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 461,078 + A4249_RS02185 0.66 +0.9 461,078 + A4249_RS02185 0.66 -0.4 461,078 + A4249_RS02185 0.66 -0.1 461,079 - A4249_RS02185 0.66 -0.8 461,079 - A4249_RS02185 0.66 -0.2 461,079 - A4249_RS02185 0.66 -0.2 461,264 + A4249_RS02185 0.74 -1.1 461,339 + A4249_RS02185 0.78 -0.2 461,340 - A4249_RS02185 0.78 +0.3 461,340 - A4249_RS02185 0.78 -0.4 461,340 - A4249_RS02185 0.78 +0.2 461,340 - A4249_RS02185 0.78 -1.5 461,340 - A4249_RS02185 0.78 -0.8 461,340 - A4249_RS02185 0.78 -0.3 461,497 + A4249_RS02185 0.85 -0.9 461,497 + A4249_RS02185 0.85 +1.8 461,498 - A4249_RS02185 0.85 +0.2 461,498 - A4249_RS02185 0.85 -1.5 461,631 + +0.1 461,631 + +1.1 461,632 - +0.4 461,632 - -0.1 461,632 - -0.0 461,658 + -0.5 461,658 + -0.9 461,659 - +0.4 461,659 - -1.8 461,660 + -0.3 461,660 + +1.6 461,660 + -0.5 461,660 + +0.6 461,660 + -0.1 461,661 - +0.3 461,661 - +0.2 461,661 - -1.1 461,661 - -0.9 461,661 - -0.5 461,661 - -0.6 461,661 - +0.4 461,661 - -0.4 461,872 + +0.2 461,872 + -0.5 461,954 + +0.6 461,954 + -2.4 461,954 + -1.9 461,954 + -0.2 461,954 + -0.4 461,954 + -1.4 461,954 + +0.2 461,954 + +0.5 461,954 + -0.5 461,954 + +0.9 461,954 + -0.2 461,955 - +1.2 461,955 - +0.3 461,955 - -0.3 461,955 - +0.0 461,955 - -1.0 461,955 - +0.2 461,996 + +0.3 461,996 + +0.1 461,996 + +0.5 461,997 - -0.5 461,997 - +0.5 461,997 - -1.4 462,092 + A4249_RS02190 0.14 +0.5 462,092 + A4249_RS02190 0.14 +0.6 462,092 + A4249_RS02190 0.14 +0.1 462,092 + A4249_RS02190 0.14 -1.5 462,093 - A4249_RS02190 0.14 -0.6 462,335 + A4249_RS02190 0.33 -0.4 462,335 + A4249_RS02190 0.33 +1.5 462,335 + A4249_RS02190 0.33 -0.0 462,336 - A4249_RS02190 0.33 +1.6 462,336 - A4249_RS02190 0.33 +1.0 462,336 - A4249_RS02190 0.33 +0.3 462,370 + A4249_RS02190 0.36 +0.3 462,370 + A4249_RS02190 0.36 +0.6 462,370 + A4249_RS02190 0.36 +0.8 462,370 + A4249_RS02190 0.36 -0.4 462,370 + A4249_RS02190 0.36 -0.5 462,370 + A4249_RS02190 0.36 -0.0 462,370 + A4249_RS02190 0.36 -0.6 462,370 + A4249_RS02190 0.36 +0.5 462,371 - A4249_RS02190 0.36 -3.0 462,371 - A4249_RS02190 0.36 +0.4 462,371 - A4249_RS02190 0.36 -2.3 462,371 - A4249_RS02190 0.36 +0.0 462,371 - A4249_RS02190 0.36 +0.5 462,371 - A4249_RS02190 0.36 -0.7 462,371 - A4249_RS02190 0.36 -0.8 462,371 - A4249_RS02190 0.36 -0.1 462,371 - A4249_RS02190 0.36 -0.6 462,371 - A4249_RS02190 0.36 -1.2 462,444 - A4249_RS02190 0.42 +0.2 462,500 + A4249_RS02190 0.46 -0.7 462,501 - A4249_RS02190 0.46 -0.0 462,593 + A4249_RS02190 0.53 -1.2 462,593 + A4249_RS02190 0.53 +0.4 462,593 + A4249_RS02190 0.53 -0.7 462,594 - A4249_RS02190 0.53 +0.0 462,740 + A4249_RS02190 0.65 -0.5 462,740 + A4249_RS02190 0.65 -0.1 462,741 - A4249_RS02190 0.65 +0.3 462,741 - A4249_RS02190 0.65 +0.5 462,741 - A4249_RS02190 0.65 +1.1 462,741 - A4249_RS02190 0.65 -0.4 462,963 + A4249_RS02190 0.82 +0.4 462,963 + A4249_RS02190 0.82 -0.4 462,963 + A4249_RS02190 0.82 -0.1 462,963 + A4249_RS02190 0.82 -1.4 462,963 + A4249_RS02190 0.82 -0.2 462,963 + A4249_RS02190 0.82 -0.3 462,963 + A4249_RS02190 0.82 -0.1 462,964 - A4249_RS02190 0.82 +0.6 462,964 - A4249_RS02190 0.82 -0.1 462,964 - A4249_RS02190 0.82 +0.2 462,964 - A4249_RS02190 0.82 -0.5 462,964 - A4249_RS02190 0.82 -0.2 462,964 - A4249_RS02190 0.82 +0.4 462,964 - A4249_RS02190 0.82 +0.5 463,040 + A4249_RS02190 0.88 -0.4 463,064 - A4249_RS02190 0.90 +0.1 463,230 - +0.8 463,325 + A4249_RS02195 0.11 +1.6
Or see this region's nucleotide sequence