Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01225 and A4249_RS01230 are separated by 28 nucleotides A4249_RS01230 and A4249_RS01235 are separated by 7 nucleotides A4249_RS01235 and A4249_RS01240 overlap by 1 nucleotides A4249_RS01240 and A4249_RS01245 overlap by 1 nucleotides
A4249_RS01225: A4249_RS01225 - hypothetical protein, at 230,353 to 235,407
_RS01225
A4249_RS01230: A4249_RS01230 - hypothetical protein, at 235,436 to 235,882
_RS01230
A4249_RS01235: A4249_RS01235 - hypothetical protein, at 235,890 to 236,363
_RS01235
A4249_RS01240: A4249_RS01240 - hypothetical protein, at 236,363 to 237,280
_RS01240
A4249_RS01245: A4249_RS01245 - hypothetical protein, at 237,280 to 239,799
_RS01245
Position (kb) 235
236
237 Strain fitness (log2 ratio) -2
-1
0
1 at 234.934 kb on + strand at 235.231 kb on - strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.247 kb on + strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.248 kb on - strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.346 kb on + strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.347 kb on - strand at 235.722 kb on + strand, within A4249_RS01230 at 235.734 kb on + strand, within A4249_RS01230 at 235.734 kb on + strand, within A4249_RS01230 at 235.921 kb on + strand at 235.921 kb on + strand at 235.921 kb on + strand at 235.921 kb on + strand at 235.921 kb on + strand at 235.921 kb on + strand at 235.922 kb on - strand at 236.200 kb on + strand, within A4249_RS01235 at 236.201 kb on - strand, within A4249_RS01235 at 236.210 kb on - strand, within A4249_RS01235 at 236.349 kb on + strand at 236.349 kb on + strand at 236.349 kb on + strand at 236.349 kb on + strand at 236.605 kb on + strand, within A4249_RS01240 at 236.605 kb on + strand, within A4249_RS01240 at 236.606 kb on - strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.829 kb on + strand, within A4249_RS01240 at 236.830 kb on - strand, within A4249_RS01240 at 236.830 kb on - strand, within A4249_RS01240 at 236.830 kb on - strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.841 kb on + strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.842 kb on - strand, within A4249_RS01240 at 236.895 kb on + strand, within A4249_RS01240 at 236.896 kb on - strand, within A4249_RS01240 at 236.961 kb on - strand, within A4249_RS01240 at 236.997 kb on + strand, within A4249_RS01240 at 236.997 kb on + strand, within A4249_RS01240 at 236.997 kb on + strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 236.998 kb on - strand, within A4249_RS01240 at 237.092 kb on + strand, within A4249_RS01240 at 237.092 kb on + strand, within A4249_RS01240 at 237.092 kb on + strand, within A4249_RS01240 at 237.092 kb on + strand, within A4249_RS01240 at 237.093 kb on - strand, within A4249_RS01240 at 237.093 kb on - strand, within A4249_RS01240 at 237.312 kb on - strand at 237.312 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 234,934 + +0.5 235,231 - +0.8 235,247 + -0.8 235,247 + +0.2 235,247 + +0.3 235,247 + -0.3 235,247 + -1.4 235,247 + -0.2 235,247 + -0.4 235,247 + -0.5 235,247 + +0.4 235,247 + +0.1 235,247 + +0.6 235,247 + -0.3 235,247 + +0.5 235,247 + -1.8 235,248 - -0.1 235,248 - -0.2 235,248 - +1.0 235,248 - -0.2 235,248 - -0.3 235,248 - +0.1 235,248 - -1.8 235,346 + -1.1 235,346 + -0.1 235,346 + -0.2 235,346 + -0.0 235,346 + +0.5 235,346 + -0.2 235,346 + -0.1 235,347 - -0.3 235,347 - -0.1 235,347 - -1.0 235,347 - +0.1 235,347 - +0.0 235,347 - +1.7 235,347 - +1.7 235,347 - -0.3 235,722 + A4249_RS01230 0.64 +1.0 235,734 + A4249_RS01230 0.67 +0.0 235,734 + A4249_RS01230 0.67 -0.5 235,921 + -0.2 235,921 + -0.3 235,921 + +0.5 235,921 + +1.1 235,921 + -0.4 235,921 + -0.1 235,922 - -0.4 236,200 + A4249_RS01235 0.65 -2.1 236,201 - A4249_RS01235 0.66 -0.3 236,210 - A4249_RS01235 0.68 +0.3 236,349 + -0.3 236,349 + -0.3 236,349 + +0.6 236,349 + +0.0 236,605 + A4249_RS01240 0.26 +0.5 236,605 + A4249_RS01240 0.26 -0.2 236,606 - A4249_RS01240 0.26 -0.0 236,829 + A4249_RS01240 0.51 -1.0 236,829 + A4249_RS01240 0.51 -0.1 236,829 + A4249_RS01240 0.51 -0.3 236,829 + A4249_RS01240 0.51 +0.4 236,829 + A4249_RS01240 0.51 +0.6 236,829 + A4249_RS01240 0.51 +0.0 236,830 - A4249_RS01240 0.51 -0.2 236,830 - A4249_RS01240 0.51 +0.3 236,830 - A4249_RS01240 0.51 +0.1 236,841 + A4249_RS01240 0.52 -0.1 236,841 + A4249_RS01240 0.52 +0.5 236,841 + A4249_RS01240 0.52 -0.3 236,841 + A4249_RS01240 0.52 +0.1 236,841 + A4249_RS01240 0.52 +0.2 236,841 + A4249_RS01240 0.52 +0.9 236,841 + A4249_RS01240 0.52 +0.3 236,841 + A4249_RS01240 0.52 -0.2 236,841 + A4249_RS01240 0.52 -0.2 236,842 - A4249_RS01240 0.52 -0.1 236,842 - A4249_RS01240 0.52 -0.5 236,842 - A4249_RS01240 0.52 +0.4 236,842 - A4249_RS01240 0.52 +0.5 236,842 - A4249_RS01240 0.52 +0.2 236,842 - A4249_RS01240 0.52 -0.2 236,842 - A4249_RS01240 0.52 +0.7 236,895 + A4249_RS01240 0.58 -0.4 236,896 - A4249_RS01240 0.58 -0.3 236,961 - A4249_RS01240 0.65 +0.1 236,997 + A4249_RS01240 0.69 +0.9 236,997 + A4249_RS01240 0.69 -1.0 236,997 + A4249_RS01240 0.69 -0.2 236,998 - A4249_RS01240 0.69 +0.4 236,998 - A4249_RS01240 0.69 -0.3 236,998 - A4249_RS01240 0.69 +0.5 236,998 - A4249_RS01240 0.69 -0.1 236,998 - A4249_RS01240 0.69 +0.7 236,998 - A4249_RS01240 0.69 +0.7 237,092 + A4249_RS01240 0.79 -1.1 237,092 + A4249_RS01240 0.79 -1.1 237,092 + A4249_RS01240 0.79 +1.2 237,092 + A4249_RS01240 0.79 +0.8 237,093 - A4249_RS01240 0.80 +0.5 237,093 - A4249_RS01240 0.80 -0.1 237,312 - +0.3 237,312 - -1.0
Or see this region's nucleotide sequence