Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03021 and MPMX19_03022 are separated by 112 nucleotides MPMX19_03022 and MPMX19_03023 are separated by 318 nucleotides MPMX19_03023 and MPMX19_03024 are separated by 351 nucleotides
MPMX19_03021: MPMX19_03021 - hypothetical protein, at 285,971 to 287,161
_03021
MPMX19_03022: MPMX19_03022 - hypothetical protein, at 287,274 to 287,684
_03022
MPMX19_03023: MPMX19_03023 - Maltose O-acetyltransferase, at 288,003 to 288,563
_03023
MPMX19_03024: MPMX19_03024 - hypothetical protein, at 288,915 to 290,369
_03024
Position (kb) 288
289 Strain fitness (log2 ratio) -2
-1
0
1 at 287.174 kb on + strand at 287.174 kb on + strand at 287.174 kb on + strand at 287.174 kb on + strand at 287.175 kb on - strand at 287.175 kb on - strand at 287.196 kb on + strand at 287.245 kb on + strand at 287.245 kb on + strand at 287.246 kb on - strand at 287.275 kb on + strand at 287.276 kb on - strand at 287.293 kb on + strand at 287.293 kb on + strand at 287.326 kb on + strand, within MPMX19_03022 at 287.326 kb on + strand, within MPMX19_03022 at 287.326 kb on + strand, within MPMX19_03022 at 287.327 kb on - strand, within MPMX19_03022 at 287.327 kb on - strand, within MPMX19_03022 at 287.327 kb on - strand, within MPMX19_03022 at 287.362 kb on + strand, within MPMX19_03022 at 287.362 kb on + strand, within MPMX19_03022 at 287.362 kb on + strand, within MPMX19_03022 at 287.376 kb on - strand, within MPMX19_03022 at 287.383 kb on + strand, within MPMX19_03022 at 287.384 kb on - strand, within MPMX19_03022 at 287.384 kb on - strand, within MPMX19_03022 at 287.384 kb on - strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.386 kb on + strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.387 kb on - strand, within MPMX19_03022 at 287.432 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.439 kb on + strand, within MPMX19_03022 at 287.440 kb on - strand, within MPMX19_03022 at 287.440 kb on - strand, within MPMX19_03022 at 287.440 kb on - strand, within MPMX19_03022 at 287.440 kb on - strand, within MPMX19_03022 at 287.465 kb on - strand, within MPMX19_03022 at 287.525 kb on + strand, within MPMX19_03022 at 287.526 kb on - strand, within MPMX19_03022 at 287.526 kb on - strand, within MPMX19_03022 at 287.526 kb on - strand, within MPMX19_03022 at 287.567 kb on + strand, within MPMX19_03022 at 287.569 kb on + strand, within MPMX19_03022 at 287.569 kb on + strand, within MPMX19_03022 at 287.569 kb on + strand, within MPMX19_03022 at 287.569 kb on + strand, within MPMX19_03022 at 287.569 kb on + strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.570 kb on - strand, within MPMX19_03022 at 287.573 kb on + strand, within MPMX19_03022 at 287.573 kb on + strand, within MPMX19_03022 at 287.574 kb on - strand, within MPMX19_03022 at 287.574 kb on - strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.602 kb on + strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.603 kb on - strand, within MPMX19_03022 at 287.717 kb on + strand at 287.717 kb on + strand at 287.748 kb on + strand at 287.749 kb on - strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.771 kb on + strand at 287.772 kb on + strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.772 kb on - strand at 287.831 kb on + strand at 287.832 kb on - strand at 287.835 kb on + strand at 287.835 kb on + strand at 287.945 kb on + strand at 287.946 kb on - strand at 287.946 kb on - strand at 287.946 kb on - strand at 288.057 kb on + strand at 288.057 kb on + strand at 288.057 kb on + strand at 288.057 kb on + strand at 288.057 kb on + strand at 288.058 kb on - strand at 288.058 kb on - strand at 288.058 kb on - strand at 288.058 kb on - strand at 288.058 kb on - strand at 288.058 kb on - strand at 288.120 kb on + strand, within MPMX19_03023 at 288.120 kb on + strand, within MPMX19_03023 at 288.120 kb on + strand, within MPMX19_03023 at 288.121 kb on - strand, within MPMX19_03023 at 288.121 kb on - strand, within MPMX19_03023 at 288.228 kb on + strand, within MPMX19_03023 at 288.228 kb on + strand, within MPMX19_03023 at 288.228 kb on + strand, within MPMX19_03023 at 288.228 kb on + strand, within MPMX19_03023 at 288.229 kb on - strand, within MPMX19_03023 at 288.229 kb on - strand, within MPMX19_03023 at 288.234 kb on + strand, within MPMX19_03023 at 288.234 kb on + strand, within MPMX19_03023 at 288.235 kb on - strand, within MPMX19_03023 at 288.697 kb on + strand at 288.698 kb on - strand at 288.733 kb on + strand at 288.826 kb on + strand at 289.363 kb on - strand, within MPMX19_03024 at 289.383 kb on + strand, within MPMX19_03024 at 289.383 kb on + strand, within MPMX19_03024 at 289.383 kb on + strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024 at 289.384 kb on - strand, within MPMX19_03024
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 287,174 + +0.2 287,174 + +0.0 287,174 + -1.5 287,174 + -0.1 287,175 - -1.5 287,175 - -0.8 287,196 + -2.5 287,245 + -1.8 287,245 + -0.7 287,246 - +1.3 287,275 + +0.0 287,276 - +1.0 287,293 + -1.3 287,293 + -0.4 287,326 + MPMX19_03022 0.13 -0.9 287,326 + MPMX19_03022 0.13 -0.3 287,326 + MPMX19_03022 0.13 -0.9 287,327 - MPMX19_03022 0.13 +0.4 287,327 - MPMX19_03022 0.13 +0.3 287,327 - MPMX19_03022 0.13 +0.5 287,362 + MPMX19_03022 0.21 -0.9 287,362 + MPMX19_03022 0.21 -1.5 287,362 + MPMX19_03022 0.21 +1.6 287,376 - MPMX19_03022 0.25 -0.2 287,383 + MPMX19_03022 0.27 -0.4 287,384 - MPMX19_03022 0.27 +0.0 287,384 - MPMX19_03022 0.27 -1.0 287,384 - MPMX19_03022 0.27 +0.2 287,386 + MPMX19_03022 0.27 +0.0 287,386 + MPMX19_03022 0.27 -0.8 287,386 + MPMX19_03022 0.27 -2.1 287,386 + MPMX19_03022 0.27 +0.0 287,386 + MPMX19_03022 0.27 -1.5 287,386 + MPMX19_03022 0.27 -0.1 287,386 + MPMX19_03022 0.27 -2.1 287,386 + MPMX19_03022 0.27 -1.0 287,386 + MPMX19_03022 0.27 -0.3 287,386 + MPMX19_03022 0.27 -0.6 287,386 + MPMX19_03022 0.27 -1.5 287,386 + MPMX19_03022 0.27 -0.8 287,386 + MPMX19_03022 0.27 -1.5 287,387 - MPMX19_03022 0.27 -0.9 287,387 - MPMX19_03022 0.27 -0.4 287,387 - MPMX19_03022 0.27 -1.3 287,387 - MPMX19_03022 0.27 -0.8 287,387 - MPMX19_03022 0.27 -1.4 287,387 - MPMX19_03022 0.27 -1.2 287,432 + MPMX19_03022 0.38 -0.6 287,439 + MPMX19_03022 0.40 -2.3 287,439 + MPMX19_03022 0.40 +0.5 287,439 + MPMX19_03022 0.40 +1.3 287,439 + MPMX19_03022 0.40 +0.0 287,439 + MPMX19_03022 0.40 -0.3 287,439 + MPMX19_03022 0.40 -1.5 287,439 + MPMX19_03022 0.40 -0.7 287,440 - MPMX19_03022 0.40 -0.8 287,440 - MPMX19_03022 0.40 +1.5 287,440 - MPMX19_03022 0.40 -1.0 287,440 - MPMX19_03022 0.40 -1.5 287,465 - MPMX19_03022 0.46 +0.2 287,525 + MPMX19_03022 0.61 -0.5 287,526 - MPMX19_03022 0.61 -0.0 287,526 - MPMX19_03022 0.61 -0.2 287,526 - MPMX19_03022 0.61 -0.5 287,567 + MPMX19_03022 0.71 -0.5 287,569 + MPMX19_03022 0.72 -1.3 287,569 + MPMX19_03022 0.72 -1.3 287,569 + MPMX19_03022 0.72 -0.3 287,569 + MPMX19_03022 0.72 -1.3 287,569 + MPMX19_03022 0.72 +0.5 287,570 - MPMX19_03022 0.72 +0.3 287,570 - MPMX19_03022 0.72 +0.2 287,570 - MPMX19_03022 0.72 -1.0 287,570 - MPMX19_03022 0.72 -1.0 287,570 - MPMX19_03022 0.72 -0.1 287,570 - MPMX19_03022 0.72 +0.4 287,570 - MPMX19_03022 0.72 -0.2 287,570 - MPMX19_03022 0.72 +0.1 287,570 - MPMX19_03022 0.72 -0.5 287,570 - MPMX19_03022 0.72 +0.4 287,570 - MPMX19_03022 0.72 +1.5 287,573 + MPMX19_03022 0.73 -0.3 287,573 + MPMX19_03022 0.73 -0.7 287,574 - MPMX19_03022 0.73 -0.4 287,574 - MPMX19_03022 0.73 -0.4 287,602 + MPMX19_03022 0.80 +0.5 287,602 + MPMX19_03022 0.80 -1.1 287,602 + MPMX19_03022 0.80 +1.0 287,602 + MPMX19_03022 0.80 -0.5 287,602 + MPMX19_03022 0.80 +0.7 287,602 + MPMX19_03022 0.80 +1.0 287,602 + MPMX19_03022 0.80 +0.6 287,603 - MPMX19_03022 0.80 -1.4 287,603 - MPMX19_03022 0.80 -0.7 287,603 - MPMX19_03022 0.80 -1.0 287,603 - MPMX19_03022 0.80 -0.5 287,603 - MPMX19_03022 0.80 +1.0 287,603 - MPMX19_03022 0.80 -1.0 287,717 + -1.8 287,717 + +1.0 287,748 + -0.2 287,749 - +0.5 287,771 + -0.7 287,771 + +0.5 287,771 + -0.5 287,771 + -0.7 287,771 + +0.3 287,771 + -0.2 287,771 + -0.9 287,771 + +0.5 287,772 + +0.9 287,772 - +0.4 287,772 - +0.0 287,772 - +0.0 287,772 - -0.3 287,772 - -0.5 287,772 - -1.5 287,772 - -1.1 287,772 - -0.3 287,772 - -1.5 287,772 - -1.5 287,831 + +1.0 287,832 - -0.8 287,835 + -0.1 287,835 + -1.4 287,945 + -1.0 287,946 - -0.4 287,946 - -0.5 287,946 - +1.0 288,057 + +0.6 288,057 + +1.0 288,057 + -1.5 288,057 + -1.5 288,057 + +0.2 288,058 - -1.0 288,058 - -0.3 288,058 - -1.5 288,058 - -0.1 288,058 - -0.3 288,058 - +0.0 288,120 + MPMX19_03023 0.21 -0.0 288,120 + MPMX19_03023 0.21 +0.0 288,120 + MPMX19_03023 0.21 -1.5 288,121 - MPMX19_03023 0.21 -2.2 288,121 - MPMX19_03023 0.21 -1.3 288,228 + MPMX19_03023 0.40 -1.1 288,228 + MPMX19_03023 0.40 -0.1 288,228 + MPMX19_03023 0.40 -0.1 288,228 + MPMX19_03023 0.40 +0.5 288,229 - MPMX19_03023 0.40 -2.0 288,229 - MPMX19_03023 0.40 +0.5 288,234 + MPMX19_03023 0.41 +0.6 288,234 + MPMX19_03023 0.41 -0.2 288,235 - MPMX19_03023 0.41 -1.5 288,697 + -2.0 288,698 - +0.0 288,733 + +0.0 288,826 + -0.5 289,363 - MPMX19_03024 0.31 -0.1 289,383 + MPMX19_03024 0.32 -0.3 289,383 + MPMX19_03024 0.32 +0.6 289,383 + MPMX19_03024 0.32 -1.0 289,384 - MPMX19_03024 0.32 +1.6 289,384 - MPMX19_03024 0.32 +1.2 289,384 - MPMX19_03024 0.32 -1.1 289,384 - MPMX19_03024 0.32 +0.3 289,384 - MPMX19_03024 0.32 +0.0 289,384 - MPMX19_03024 0.32 -0.2 289,384 - MPMX19_03024 0.32 -0.8
Or see this region's nucleotide sequence