Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02714

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,846,039	+		MPMX19_02713	0.79	-0.2
2,846,039	+		MPMX19_02713	0.79	-0.1
2,846,039	+		MPMX19_02713	0.79	-2.5
2,846,039	+		MPMX19_02713	0.79	-0.9
2,846,039	+		MPMX19_02713	0.79	-1.0
2,846,039	+		MPMX19_02713	0.79	-1.9
2,846,039	+		MPMX19_02713	0.79	-1.3
2,846,039	+		MPMX19_02713	0.79	-1.6
2,846,039	+		MPMX19_02713	0.79	-1.6
2,846,039	+		MPMX19_02713	0.79	+0.7
2,846,039	+		MPMX19_02713	0.79	-1.6
2,846,039	+		MPMX19_02713	0.79	-1.6
2,846,039	+		MPMX19_02713	0.79	+0.7
2,846,039	+		MPMX19_02713	0.79	-1.6
2,846,039	+		MPMX19_02713	0.79	-0.3
2,846,040	-		MPMX19_02713	0.79	-1.5
2,846,040	-		MPMX19_02713	0.79	-0.6
2,846,040	-		MPMX19_02713	0.79	-1.6
2,846,040	-		MPMX19_02713	0.79	-1.4
2,846,040	-		MPMX19_02713	0.79	-0.1
2,846,040	-		MPMX19_02713	0.79	-0.2
2,846,040	-		MPMX19_02713	0.79	+1.4
2,846,040	-		MPMX19_02713	0.79	-0.9
2,846,040	-		MPMX19_02713	0.79	-0.4
2,846,040	-		MPMX19_02713	0.79	-0.4
2,846,040	-		MPMX19_02713	0.79	-0.7
2,846,040	-		MPMX19_02713	0.79	-0.2
2,846,040	-		MPMX19_02713	0.79	-0.3
2,846,040	-		MPMX19_02713	0.79	-1.2
2,846,040	-		MPMX19_02713	0.79	-1.0
2,846,040	-		MPMX19_02713	0.79	-1.6
2,846,040	-		MPMX19_02713	0.79	-0.5
2,846,040	-		MPMX19_02713	0.79	-0.5
2,846,040	-		MPMX19_02713	0.79	+0.1
2,846,048	+		MPMX19_02713	0.80	-2.2
2,846,048	+		MPMX19_02713	0.80	-0.8
2,846,048	+		MPMX19_02713	0.80	-0.6
2,846,048	+		MPMX19_02713	0.80	+0.3
2,846,064	+		MPMX19_02713	0.82	-0.7
2,846,064	+		MPMX19_02713	0.82	-0.6
2,846,064	+		MPMX19_02713	0.82	+0.4
2,846,064	+		MPMX19_02713	0.82	-0.3
2,846,064	+		MPMX19_02713	0.82	-0.3
2,846,064	+		MPMX19_02713	0.82	-0.8
2,846,064	+		MPMX19_02713	0.82	-1.7
2,846,064	+		MPMX19_02713	0.82	-1.4
2,846,064	+		MPMX19_02713	0.82	-0.3
2,846,064	+		MPMX19_02713	0.82	-0.7
2,846,064	+		MPMX19_02713	0.82	+0.1
2,846,064	+		MPMX19_02713	0.82	-0.5
2,846,064	+		MPMX19_02713	0.82	-0.3
2,846,064	+		MPMX19_02713	0.82	-0.6
2,846,064	+		MPMX19_02713	0.82	-0.5
2,846,064	+		MPMX19_02713	0.82	-0.7
2,846,064	+		MPMX19_02713	0.82	-1.9
2,846,064	+		MPMX19_02713	0.82	-0.3
2,846,065	-		MPMX19_02713	0.82	-0.7
2,846,065	-		MPMX19_02713	0.82	+0.3
2,846,065	-		MPMX19_02713	0.82	+0.4
2,846,065	-		MPMX19_02713	0.82	-1.9
2,846,065	-		MPMX19_02713	0.82	-0.2
2,846,065	-		MPMX19_02713	0.82	-0.8
2,846,065	-		MPMX19_02713	0.82	-1.3
2,846,065	-		MPMX19_02713	0.82	-1.2
2,846,065	-		MPMX19_02713	0.82	-0.6
2,846,065	-		MPMX19_02713	0.82	-1.6
2,846,065	-		MPMX19_02713	0.82	-1.0
2,846,065	-		MPMX19_02713	0.82	-0.9
2,846,065	-		MPMX19_02713	0.82	-1.5
2,846,065	-		MPMX19_02713	0.82	-2.9
2,846,065	-		MPMX19_02713	0.82	-0.2
2,846,065	-		MPMX19_02713	0.82	-1.0
2,846,065	-		MPMX19_02713	0.82	-2.8
2,846,065	-		MPMX19_02713	0.82	-1.8
2,846,074	+		MPMX19_02713	0.83	-0.6
2,846,074	+		MPMX19_02713	0.83	-3.0
2,846,074	+		MPMX19_02713	0.83	-0.9
2,846,074	+		MPMX19_02713	0.83	+0.3
2,846,075	-		MPMX19_02713	0.83	-1.1
2,846,075	-		MPMX19_02713	0.83	-1.9
2,846,075	-		MPMX19_02713	0.83	-1.6
2,846,075	-		MPMX19_02713	0.83	-2.1
2,846,075	-		MPMX19_02713	0.83	-0.9
2,846,075	-		MPMX19_02713	0.83	+0.3
2,846,116	-		MPMX19_02713	0.88	-0.6
2,846,123	+		MPMX19_02713	0.89	+0.1
2,846,123	+		MPMX19_02713	0.89	-2.5
2,846,123	+		MPMX19_02713	0.89	+0.4
2,846,123	+		MPMX19_02713	0.89	-0.3
2,846,123	+		MPMX19_02713	0.89	-1.1
2,846,124	-		MPMX19_02713	0.89	+0.1
2,846,124	-		MPMX19_02713	0.89	+0.1
2,846,124	-		MPMX19_02713	0.89	-1.6
2,846,124	-		MPMX19_02713	0.89	-0.7
2,846,124	-		MPMX19_02713	0.89	-1.3
2,846,124	-		MPMX19_02713	0.89	+0.5
2,846,124	-		MPMX19_02713	0.89	-1.9
2,846,124	-		MPMX19_02713	0.89	-0.9
2,846,133	+		MPMX19_02713	0.90	-0.3
2,846,134	-		MPMX19_02713	0.90	-1.0
2,846,172	-				+0.1
2,846,256	+				+0.3
2,846,256	+				+0.0
2,846,256	+				-1.4
2,846,256	+				-1.3
2,846,256	+				-3.1
2,846,256	+				-0.9
2,846,256	+				-1.2
2,846,256	+				-1.1
2,846,256	+				-0.4
2,846,257	-				-1.1
2,846,257	-				+0.0
2,846,257	-				-1.3
2,846,257	-				-0.6
2,846,260	+				-0.8
2,846,260	+				+0.7
2,846,260	+				-0.1
2,846,260	+				-1.8
2,846,260	+				-1.6
2,846,260	+				-0.9
2,846,260	+				-0.9
2,846,260	+				-0.5
2,846,260	+				-1.6
2,846,260	+				-0.7
2,846,261	-				-0.7
2,846,261	-				-0.3
2,846,261	-				-0.9
2,846,261	-				+0.3
2,846,261	-				+0.1
2,846,261	-				-1.1
2,846,261	-				-0.9
2,846,261	-				-2.1
2,846,261	-				-0.9
2,846,261	-				-0.6
2,846,261	-				-0.9
2,846,261	-				-0.8
2,846,261	-				-1.3
2,846,261	-				-0.2
2,846,261	-				-3.3
2,846,261	-				+0.5
2,846,261	-				+1.3
2,846,261	-				-3.5
2,846,287	-				-0.7
2,846,287	-				-1.1
2,846,287	-				-1.9
2,846,287	-				-1.6
2,846,287	-				+0.3
2,846,287	-				-0.5
2,846,290	-				-0.9
2,846,290	-				+0.1
2,846,290	-				-1.3
2,846,290	-				-1.3
2,846,290	-				-0.0
2,846,293	-				-0.5
2,846,304	+				-0.7
2,846,315	-				-2.1
2,846,315	-				+0.3
2,846,337	+				-1.6
2,846,428	+				-1.2
2,846,428	+				-0.5
2,846,428	+				-0.0
2,846,428	+				-2.3
2,846,428	+				-0.9
2,846,429	-				-0.8
2,846,429	-				-0.3
2,846,429	-				-1.3
2,846,429	-				-1.3
2,846,429	-				-0.9
2,846,429	-				-0.6
2,846,431	+				-0.9
2,846,431	+				-0.3
2,846,432	-				+0.2
2,846,515	+				-1.0
2,846,516	-				+0.1
2,846,516	-				-1.6
2,846,517	+				-1.6
2,846,517	+				-1.6
2,846,517	+				-0.3
2,846,517	+				-1.3
2,846,518	-				-1.1
2,846,518	-				-0.6
2,846,566	+				-0.7
2,846,566	+				-0.9
2,846,566	+				-0.0
2,846,566	+				-1.8
2,846,567	-				-0.7
2,846,567	-				-0.2
2,846,567	-				-0.9
2,846,567	-				+0.5
2,846,567	-				-1.0
2,846,570	+				-2.1
2,846,570	+				-1.3
2,846,570	+				-1.0
2,846,570	+				-0.4
2,846,570	+				-1.0
2,846,570	+				+1.0
2,846,570	+				-2.1
2,846,570	+				+0.2
2,846,570	+				-1.3
2,846,571	-				+0.7
2,846,571	-				-0.4
2,846,571	-				-0.9
2,846,571	-				+0.4
2,846,571	-				-0.3
2,846,571	-				-1.6
2,846,571	-				-0.9
2,846,579	+				-1.3
2,846,580	-				+0.7
2,846,607	+				+0.2
2,846,607	+				-1.3
2,846,653	+				-0.6
2,846,653	+				-2.1
2,846,653	+				-1.5
2,846,654	-				+0.1
2,846,654	-				-1.9
2,846,654	-				+0.4
2,846,666	+				-1.3
2,846,666	+				+1.1
2,846,666	+				-1.9
2,846,666	+				-0.7
2,846,666	+				-0.6
2,846,674	+				-0.7
2,846,674	+				-0.3
2,846,674	+				-3.0
2,846,674	+				-0.5
2,846,674	+				-0.9
2,846,674	+				+1.0
2,846,674	+				-2.7
2,846,674	+				-1.0
2,846,674	+				-1.3
2,846,674	+				+0.3
2,846,675	-				-0.5
2,846,675	-				-0.3
2,846,675	-				+0.4
2,846,675	-				+0.0
2,846,675	-				-0.7
2,846,675	-				+0.4
2,846,736	+				-1.2
2,846,737	-				+1.0
2,846,779	+				-1.0
2,846,833	+				-1.5
2,846,833	+				-0.5
2,846,833	+				-1.1
2,846,833	+				+0.1
2,846,833	+				-1.5
2,846,833	+				-0.7
2,846,833	+				-0.3
2,846,833	+				-1.7
2,846,833	+				+0.0
2,846,833	+				-1.2
2,846,834	-				-0.7
2,846,834	-				-0.4
2,846,834	-				-0.6
2,846,834	-				-0.9
2,846,834	-				+0.1
2,846,834	-				-0.5
2,846,834	-				+1.7
2,846,834	-				-2.9
2,846,834	-				+0.3
2,846,834	-				-1.1
2,846,834	-				+0.7
2,846,834	-				+0.1
2,846,835	+				-2.2
2,846,835	+				-1.9
2,846,836	-				-1.0
2,846,836	-				-1.2
2,846,836	-				-1.5
2,846,853	-				-0.5
2,846,857	+				-1.1
2,846,862	+				-0.9
2,846,862	+				+0.7
2,846,863	-				-0.3
2,846,863	-				+0.7
2,846,863	-				-0.8
2,846,863	-				-0.6
2,846,865	+				+1.7
2,846,865	+				-0.3
2,846,866	-				-2.0
2,846,866	-				-0.3
2,846,866	-				-1.5
2,846,866	-				-1.6
2,846,867	+				-0.5
2,846,867	+				-0.3
2,846,867	+				-0.6
2,846,867	+				-0.9
2,846,868	-				-1.0
2,846,868	-				+1.0
2,846,952	+				+0.4
2,846,953	-				-2.3
2,846,953	-				-0.3
2,846,971	-				-0.7
2,846,971	-				-0.6
2,846,982	+				-0.9
2,846,982	+				-0.6
2,846,982	+				-0.3
2,846,982	+				+0.7
2,846,982	+				+0.7
2,846,982	+				-1.5
2,846,983	-				-1.3
2,846,983	-				-2.0
2,846,983	-				-1.4
2,846,983	-				+0.1
2,846,983	-				-1.7
2,846,983	-				-1.1
2,846,983	-				-1.3
2,846,985	+				-0.9
2,846,985	+				-0.5
2,846,985	+				-0.3
2,846,985	+				-0.8
2,846,985	+				-1.2
2,846,986	-				-0.3
2,846,986	-				+0.1
2,846,986	-				-2.1
2,846,986	-				-1.3
2,846,986	-				-0.7
2,846,986	-				-2.5
2,847,002	+				-2.2
2,847,245	+		MPMX19_02714	0.73	-0.0
2,847,245	+		MPMX19_02714	0.73	-1.6
2,847,245	+		MPMX19_02714	0.73	+0.9
2,847,245	+		MPMX19_02714	0.73	+0.7
2,847,245	+		MPMX19_02714	0.73	+0.1
2,847,246	-		MPMX19_02714	0.73	-2.1
2,847,246	-		MPMX19_02714	0.73	-0.6
2,847,246	-		MPMX19_02714	0.73	+0.7
2,847,246	-		MPMX19_02714	0.73	-1.1
2,847,389	+				-1.5
2,847,389	+				+0.1
2,847,390	-				-0.1
2,847,390	-				-0.5
2,847,436	+				-0.1
2,847,436	+				-0.9
2,847,437	-				-0.8
2,847,437	-				-0.3
2,847,460	+				+0.1
2,847,460	+				-0.6
2,847,467	-				-0.3
2,847,467	-				+0.3
2,847,480	+				-0.2
2,847,480	+				-1.6
2,847,480	+				+1.0
2,847,481	-				+0.7
2,847,498	+				+0.7
2,847,498	+				+0.7
2,847,498	+				-1.9
2,847,499	-				+0.7
2,847,552	+				-0.6
2,847,552	+				-0.0
2,847,552	+				+0.1
2,847,552	+				-1.6
2,847,553	-				-0.4
2,847,570	+				-0.3
2,847,570	+				-3.4
2,847,570	+				-1.6
2,847,570	+				-0.8
2,847,633	-				-0.6
2,847,633	-				+0.7
2,847,633	-				+0.4
2,847,633	-				-0.7
2,847,633	-				-0.3
2,847,633	-				+0.7
2,847,633	-				-0.1
2,847,641	+				-2.4
2,847,641	+				-0.0
2,847,659	-				+2.7
2,847,684	+				-0.9
2,847,684	+				-2.5
2,847,685	-				-0.3
2,847,685	-				+0.5
2,847,685	-				+0.4