Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02266

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,383,310	+		MPMX19_02265	0.22	-1.4
2,383,313	+		MPMX19_02265	0.22	-0.9
2,383,331	+		MPMX19_02265	0.24	-2.3
2,383,332	-		MPMX19_02265	0.24	-0.7
2,383,359	+		MPMX19_02265	0.27	-1.5
2,383,360	-		MPMX19_02265	0.27	-1.1
2,383,360	-		MPMX19_02265	0.27	+0.1
2,383,413	+		MPMX19_02265	0.32	+0.3
2,383,413	+		MPMX19_02265	0.32	+0.1
2,383,500	+		MPMX19_02265	0.42	-0.1
2,383,500	+		MPMX19_02265	0.42	-0.1
2,383,501	-		MPMX19_02265	0.42	-0.5
2,383,501	-		MPMX19_02265	0.42	+0.3
2,383,503	-		MPMX19_02265	0.42	-0.8
2,383,512	+		MPMX19_02265	0.43	-0.5
2,383,512	+		MPMX19_02265	0.43	+1.3
2,383,512	+		MPMX19_02265	0.43	+0.3
2,383,591	-		MPMX19_02265	0.51	-0.7
2,383,592	+		MPMX19_02265	0.51	+1.0
2,383,592	+		MPMX19_02265	0.51	-0.5
2,383,592	+		MPMX19_02265	0.51	+1.0
2,383,593	-		MPMX19_02265	0.51	-3.1
2,383,593	-		MPMX19_02265	0.51	-1.5
2,383,593	-		MPMX19_02265	0.51	-2.7
2,383,593	-		MPMX19_02265	0.51	-1.9
2,383,597	+		MPMX19_02265	0.52	-1.1
2,383,597	+		MPMX19_02265	0.52	+0.3
2,383,597	+		MPMX19_02265	0.52	+0.5
2,383,597	+		MPMX19_02265	0.52	-2.3
2,383,597	+		MPMX19_02265	0.52	-1.5
2,383,598	-		MPMX19_02265	0.52	-0.4
2,383,598	-		MPMX19_02265	0.52	-0.4
2,383,603	+		MPMX19_02265	0.52	-0.5
2,383,644	-		MPMX19_02265	0.57	-0.7
2,383,868	+		MPMX19_02265	0.80	+0.3
2,383,868	+		MPMX19_02265	0.80	-1.7
2,383,907	+		MPMX19_02265	0.84	+0.5
2,383,920	-		MPMX19_02265	0.86	+1.1
2,383,923	+		MPMX19_02265	0.86	-0.2
2,383,979	-				-0.4
2,384,031	+				-1.0
2,384,087	-				-1.4
2,384,087	-				-0.2
2,384,087	-				-1.6
2,384,110	+				-0.1
2,384,110	+				+0.9
2,384,110	+				-0.4
2,384,110	+				+0.4
2,384,110	+				-1.7
2,384,110	+				-0.3
2,384,110	+				-1.4
2,384,111	-				-1.1
2,384,111	-				+0.1
2,384,111	-				-0.1
2,384,111	-				+0.9
2,384,147	+				-0.2
2,384,147	+				+0.3
2,384,147	+				-0.1
2,384,147	+				-0.3
2,384,148	-				-2.9
2,384,148	-				-1.4
2,384,148	-				-1.1
2,384,148	-				-1.1
2,384,148	-				-1.7
2,384,172	+				-0.5
2,384,172	+				-0.7
2,384,172	+				-1.7
2,384,172	+				+0.9
2,384,172	+				-1.9
2,384,172	+				-0.9
2,384,172	+				+0.2
2,384,173	-				-0.1
2,384,173	-				+0.1
2,384,173	-				-0.7
2,384,173	-				+0.7
2,384,173	-				-0.4
2,384,204	+				-0.3
2,384,204	+				-0.8
2,384,204	+				-0.8
2,384,204	+				-2.0
2,384,204	+				+0.0
2,384,204	+				-0.2
2,384,204	+				-1.1
2,384,204	+				+0.9
2,384,204	+				-0.2
2,384,204	+				+0.9
2,384,204	+				-0.4
2,384,205	-				-1.4
2,384,205	-				+0.1
2,384,205	-				-0.8
2,384,205	-				+0.3
2,384,205	-				-0.9
2,384,205	-				-2.1
2,384,205	-				-0.6
2,384,205	-				-1.4
2,384,205	-				-1.6
2,384,205	-				-0.8
2,384,205	-				-0.5
2,384,205	-				-2.3
2,384,205	-				+0.6
2,384,205	-				+1.6
2,384,239	+				-0.2
2,384,239	+				-0.1
2,384,239	+				-0.1
2,384,239	+				-1.3
2,384,239	+				-0.2
2,384,240	-				-1.1
2,384,240	-				-0.7
2,384,240	-				-0.7
2,384,240	-				-0.1
2,384,240	-				+0.2
2,384,240	-				-0.5
2,384,240	-				+0.1
2,384,253	-				+1.4
2,384,284	+				-2.1
2,384,284	+				-0.4
2,384,284	+				+0.1
2,384,284	+				+1.3
2,384,284	+				+1.5
2,384,284	+				-1.3
2,384,284	+				-1.1
2,384,284	+				+0.5
2,384,284	+				-1.9
2,384,284	+				-0.3
2,384,284	+				+0.0
2,384,284	+				+1.3
2,384,284	+				+0.0
2,384,285	-				-0.5
2,384,285	-				+0.1
2,384,285	-				+3.2
2,384,285	-				-0.3
2,384,285	-				-1.1
2,384,285	-				-0.9
2,384,285	-				-0.6
2,384,285	-				-1.3
2,384,285	-				-0.1
2,384,285	-				+0.1
2,384,442	+		MPMX19_02266	0.59	-0.8
2,384,442	+		MPMX19_02266	0.59	-0.8
2,384,443	-		MPMX19_02266	0.59	-0.3
2,384,492	+		MPMX19_02266	0.78	+0.5
2,384,492	+		MPMX19_02266	0.78	+0.4
2,384,492	+		MPMX19_02266	0.78	+1.3
2,384,492	+		MPMX19_02266	0.78	-0.1
2,384,492	+		MPMX19_02266	0.78	-0.4
2,384,493	-		MPMX19_02266	0.79	+0.3
2,384,493	-		MPMX19_02266	0.79	+0.9
2,384,493	-		MPMX19_02266	0.79	+0.1
2,384,493	-		MPMX19_02266	0.79	-0.5
2,384,493	-		MPMX19_02266	0.79	-1.9
2,384,493	-		MPMX19_02266	0.79	-1.1
2,384,493	-		MPMX19_02266	0.79	+1.5
2,384,493	-		MPMX19_02266	0.79	-0.6
2,384,544	+				-0.4
2,384,544	+				+0.2
2,384,544	+				-0.7
2,384,544	+				-0.7
2,384,544	+				-0.1
2,384,544	+				-1.1
2,384,544	+				+0.3
2,384,544	+				-1.9
2,384,544	+				-0.6
2,384,544	+				+0.5
2,384,544	+				-0.7
2,384,545	-				-1.1
2,384,545	-				+0.7
2,384,545	-				+0.9
2,384,545	-				-0.7
2,384,545	-				-1.9
2,384,545	-				+0.7
2,384,545	-				-1.0
2,384,545	-				-1.1
2,384,545	-				+0.3
2,384,545	-				-0.4
2,384,589	+				-0.9
2,384,589	+				-0.3
2,384,589	+				+0.9
2,384,589	+				+1.9
2,384,589	+				+1.5
2,384,590	-				-1.1
2,384,590	-				-0.1
2,384,590	-				-0.1
2,384,590	-				+0.3
2,384,590	-				-1.4
2,384,603	+				-1.3
2,384,603	+				-1.9
2,384,603	+				+0.4
2,384,603	+				+0.5
2,384,603	+				-0.5
2,384,603	+				+0.3
2,384,603	+				-0.1
2,384,603	+				+2.2
2,384,603	+				-0.6
2,384,603	+				-0.4
2,384,603	+				+0.2
2,384,603	+				-0.1
2,384,604	-				-1.7
2,384,604	-				+0.3
2,384,604	-				-2.0
2,384,604	-				-0.6
2,384,604	-				+0.9
2,384,604	-				-0.5
2,384,604	-				+0.9
2,384,691	+				-0.6
2,384,691	+				-0.1
2,384,691	+				+0.2
2,384,691	+				+0.9
2,384,691	+				-1.1
2,384,691	+				-0.7
2,384,691	+				+0.9
2,384,691	+				-0.3
2,384,691	+				-1.2
2,384,691	+				+0.1
2,384,691	+				-0.8
2,384,691	+				-1.5
2,384,691	+				+0.5
2,384,692	-				-0.4
2,384,692	-				+0.4
2,384,692	-				-0.7
2,384,692	-				-0.1
2,384,692	-				+0.0
2,384,692	-				+0.6
2,384,692	-				+1.3
2,384,710	+				-0.1
2,384,710	+				-0.1
2,384,710	+				+0.5
2,384,710	+				+0.9
2,384,710	+				-1.1
2,384,710	+				+1.5
2,384,710	+				-0.7
2,384,710	+				+0.9
2,384,710	+				-0.8
2,384,710	+				+0.1
2,384,710	+				+0.3
2,384,710	+				-1.3
2,384,710	+				+0.9
2,384,710	+				+0.1
2,384,710	+				-1.8
2,384,710	+				+0.4
2,384,710	+				-0.1
2,384,710	+				-0.1
2,384,710	+				-0.1
2,384,710	+				+0.1
2,384,710	+				+1.6
2,384,710	+				+1.5
2,384,710	+				+0.2
2,384,710	+				+1.1
2,384,710	+				-0.1
2,384,711	-				-1.4
2,384,711	-				-1.7
2,384,711	-				+0.3
2,384,711	-				+0.2
2,384,711	-				+0.6
2,384,711	-				+0.5
2,384,711	-				-0.1
2,384,711	-				+1.2
2,384,711	-				-0.1
2,384,711	-				-0.1
2,384,711	-				+0.4
2,384,711	-				-2.0
2,384,711	-				-1.9
2,384,711	-				-0.7
2,384,711	-				-0.7
2,384,711	-				-0.9
2,384,711	-				-1.1
2,384,711	-				-0.0
2,384,711	-				+0.9
2,384,711	-				+0.9
2,384,711	-				-0.7
2,384,719	+				-1.0
2,384,719	+				+0.2
2,384,719	+				-0.3
2,384,720	-				-0.0
2,384,720	-				-0.9
2,384,804	-				+0.9
2,384,804	-				+0.9
2,384,804	-				+0.7
2,384,881	+				-0.1
2,384,881	+				-0.7
2,384,881	+				+0.9
2,384,882	-				-0.9
2,385,001	+				+0.5
2,385,001	+				+0.4
2,385,001	+				-0.4
2,385,001	+				-1.4
2,385,001	+				-0.9
2,385,002	-				-0.7
2,385,002	-				+0.2
2,385,002	-				-1.0
2,385,002	-				-0.7
2,385,002	-				-0.1
2,385,002	-				-0.1
2,385,002	-				-0.1
2,385,011	+				+1.5
2,385,011	+				-2.1
2,385,011	+				-1.5
2,385,011	+				+0.6
2,385,011	+				+0.9
2,385,012	-				-1.0
2,385,012	-				-0.7
2,385,012	-				-0.4
2,385,012	-				-0.1
2,385,012	-				+0.5
2,385,012	-				+0.1
2,385,037	-				-1.1
2,385,037	-				-0.1
2,385,037	-				-1.0
2,385,105	+				-3.8
2,385,187	+				-0.9
2,385,187	+				-0.7
2,385,187	+				+0.9
2,385,187	+				-0.9
2,385,187	+				-2.0
2,385,187	+				-1.6
2,385,188	-				-0.4
2,385,188	-				-0.1
2,385,188	-				+0.9
2,385,188	-				-0.3
2,385,188	-				+0.3
2,385,188	-				-1.4
2,385,188	-				-1.1
2,385,188	-				-0.7
2,385,233	+				-1.6
2,385,233	+				-1.7
2,385,233	+				+0.1
2,385,233	+				-1.6
2,385,234	-				-0.7
2,385,234	-				-0.4
2,385,234	-				-1.3
2,385,234	-				-0.1
2,385,234	-				-0.4
2,385,234	-				-0.5
2,385,234	-				-0.0
2,385,234	-				-1.9
2,385,234	-				+0.9
2,385,234	-				-0.7
2,385,234	-				-0.2
2,385,237	+				-1.9
2,385,237	+				+0.2
2,385,237	+				+1.1
2,385,237	+				-1.4
2,385,237	+				+0.3
2,385,237	+				-0.6
2,385,237	+				-0.4
2,385,238	-				+0.6
2,385,238	-				-0.7
2,385,238	-				-1.0
2,385,238	-				-1.7
2,385,238	-				-0.1
2,385,238	-				+0.1
2,385,269	+				-1.1
2,385,269	+				-0.7
2,385,269	+				+0.3
2,385,269	+				+0.9
2,385,270	-				-0.1
2,385,270	-				+0.5
2,385,270	-				-0.1
2,385,270	-				-0.2
2,385,270	-				-0.1
2,385,270	-				-0.1
2,385,270	-				-1.4
2,385,271	+				-2.4
2,385,271	+				-0.4
2,385,271	+				-1.4
2,385,271	+				+0.3
2,385,271	+				-0.4
2,385,271	+				-2.3
2,385,271	+				-0.8
2,385,271	+				+0.3
2,385,271	+				-1.7
2,385,271	+				+0.9
2,385,271	+				+1.1
2,385,271	+				-0.1
2,385,271	+				-1.1
2,385,271	+				-0.7
2,385,271	+				+0.1
2,385,271	+				+0.1
2,385,271	+				-0.7
2,385,271	+				-0.9
2,385,271	+				+0.4
2,385,271	+				-0.4
2,385,271	+				-1.1
2,385,271	+				-1.4
2,385,271	+				-1.2
2,385,271	+				-0.7
2,385,271	+				-0.3
2,385,271	+				+0.3
2,385,271	+				+0.9
2,385,272	+				-0.4
2,385,272	-				-1.0
2,385,272	-				-1.9
2,385,272	-				-1.1
2,385,272	-				+0.5
2,385,272	-				-0.7
2,385,272	-				-0.3
2,385,272	-				-2.5
2,385,272	-				-1.1
2,385,272	-				+0.1
2,385,272	-				+0.2
2,385,272	-				+0.9
2,385,272	-				+0.4
2,385,272	-				-0.4
2,385,272	-				-2.1
2,385,272	-				+0.1
2,385,272	-				-1.1
2,385,272	-				-1.7
2,385,272	-				-0.9
2,385,272	-				-0.3
2,385,272	-				+0.1
2,385,279	+				-1.1
2,385,279	+				+0.1
2,385,279	+				+0.4
2,385,279	+				-1.1
2,385,279	+				-0.8
2,385,279	+				-0.8
2,385,279	+				+0.6
2,385,280	-				+0.3
2,385,280	-				+0.1
2,385,280	-				-0.9
2,385,280	-				+1.0
2,385,280	-				-1.2
2,385,280	-				-0.1
2,385,280	-				+0.7
2,385,280	-				-0.9
2,385,280	-				+0.3
2,385,280	-				-0.9
2,385,280	-				-0.1
2,385,288	+				+0.3
2,385,288	+				+0.6
2,385,288	+				+0.3
2,385,288	+				-1.1
2,385,288	+				-0.4
2,385,288	+				-0.3
2,385,288	+				-0.4
2,385,346	+				-0.3
2,385,347	-				+0.2
2,385,347	-				-0.3
2,385,347	-				-0.8
2,385,366	+				+0.3
2,385,366	+				+0.3
2,385,366	+				-1.3
2,385,367	-				+0.5
2,385,367	-				-0.5
2,385,381	+				-1.5
2,385,381	+				+0.4
2,385,381	+				-1.5
2,385,381	+				+1.3
2,385,381	+				-1.1
2,385,381	+				-1.5
2,385,381	+				-0.9
2,385,381	+				-1.4
2,385,381	+				-0.7
2,385,381	+				+0.0
2,385,381	+				-1.5
2,385,381	+				-1.0
2,385,381	+				-0.7
2,385,381	+				-1.7
2,385,381	+				-0.2
2,385,382	-				+0.5
2,385,382	-				-0.4
2,385,382	-				-1.6
2,385,382	-				+0.5
2,385,382	-				+0.4
2,385,382	-				-1.1
2,385,382	-				-1.1
2,385,382	-				-1.2
2,385,382	-				-0.3
2,385,382	-				+0.5
2,385,382	-				+2.5
2,385,382	-				-1.4
2,385,382	-				+0.1
2,385,402	+				-1.5
2,385,402	+				-0.6
2,385,402	+				-1.9
2,385,402	+				-1.1
2,385,402	+				-1.7
2,385,402	+				+0.5
2,385,402	+				-0.5
2,385,402	+				-0.5
2,385,403	-				-1.0
2,385,403	-				-0.5
2,385,403	-				+0.0
2,385,403	-				-1.1
2,385,403	-				-0.7
2,385,403	-				-0.4
2,385,403	-				-1.5
2,385,423	+				-0.7
2,385,423	+				-0.1
2,385,424	-				-0.7