Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01816

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,898,960	+		MPMX19_01815	0.38	-0.1
1,898,960	+		MPMX19_01815	0.38	-1.1
1,898,960	+		MPMX19_01815	0.38	+0.3
1,898,961	-		MPMX19_01815	0.38	-1.3
1,898,961	-		MPMX19_01815	0.38	-1.3
1,898,961	-		MPMX19_01815	0.38	-1.0
1,899,143	+		MPMX19_01815	0.52	-0.3
1,899,143	+		MPMX19_01815	0.52	-0.8
1,899,143	+		MPMX19_01815	0.52	-0.3
1,899,143	+		MPMX19_01815	0.52	-0.5
1,899,144	-		MPMX19_01815	0.52	-0.5
1,899,242	+		MPMX19_01815	0.59	+0.2
1,899,242	+		MPMX19_01815	0.59	+0.3
1,899,242	+		MPMX19_01815	0.59	+0.6
1,899,296	+		MPMX19_01815	0.63	+0.4
1,899,296	+		MPMX19_01815	0.63	-0.3
1,899,296	+		MPMX19_01815	0.63	+1.0
1,899,296	+		MPMX19_01815	0.63	-0.0
1,899,296	+		MPMX19_01815	0.63	-1.1
1,899,296	+		MPMX19_01815	0.63	-0.7
1,899,296	+		MPMX19_01815	0.63	+0.0
1,899,296	+		MPMX19_01815	0.63	-0.8
1,899,296	+		MPMX19_01815	0.63	-0.4
1,899,296	+		MPMX19_01815	0.63	-1.0
1,899,296	+		MPMX19_01815	0.63	+1.0
1,899,296	+		MPMX19_01815	0.63	+0.5
1,899,296	+		MPMX19_01815	0.63	-1.0
1,899,296	+		MPMX19_01815	0.63	-0.8
1,899,296	+		MPMX19_01815	0.63	-0.6
1,899,296	+		MPMX19_01815	0.63	+0.0
1,899,296	+		MPMX19_01815	0.63	-1.0
1,899,297	-		MPMX19_01815	0.63	-0.5
1,899,297	-		MPMX19_01815	0.63	+0.0
1,899,347	+		MPMX19_01815	0.66	-1.0
1,899,347	+		MPMX19_01815	0.66	-0.5
1,899,347	+		MPMX19_01815	0.66	+0.0
1,899,348	-		MPMX19_01815	0.66	+0.0
1,899,348	-		MPMX19_01815	0.66	+2.0
1,899,362	+		MPMX19_01815	0.67	-1.5
1,899,362	+		MPMX19_01815	0.67	-0.5
1,899,362	+		MPMX19_01815	0.67	-0.7
1,899,362	+		MPMX19_01815	0.67	+0.4
1,899,362	+		MPMX19_01815	0.67	+0.7
1,899,363	-		MPMX19_01815	0.68	-0.5
1,899,363	-		MPMX19_01815	0.68	-1.3
1,899,363	-		MPMX19_01815	0.68	+0.0
1,899,363	-		MPMX19_01815	0.68	-0.1
1,899,551	+		MPMX19_01815	0.81	+0.0
1,899,551	+		MPMX19_01815	0.81	-2.0
1,899,551	+		MPMX19_01815	0.81	+0.4
1,899,551	+		MPMX19_01815	0.81	+0.2
1,899,551	+		MPMX19_01815	0.81	-0.8
1,899,551	+		MPMX19_01815	0.81	-0.5
1,899,551	+		MPMX19_01815	0.81	+0.6
1,899,551	+		MPMX19_01815	0.81	-1.5
1,899,551	+		MPMX19_01815	0.81	-0.3
1,899,551	+		MPMX19_01815	0.81	+0.3
1,899,552	-		MPMX19_01815	0.81	+0.0
1,899,552	-		MPMX19_01815	0.81	-2.0
1,899,552	-		MPMX19_01815	0.81	+1.0
1,899,552	-		MPMX19_01815	0.81	-0.5
1,899,695	+				-0.2
1,899,695	+				+1.3
1,899,695	+				-1.5
1,899,695	+				+0.9
1,899,695	+				+0.3
1,899,696	-				+0.7
1,899,696	-				+0.5
1,899,696	-				+0.5
1,901,105	+				+0.0
1,901,105	+				-1.3
1,901,375	+				+0.4
1,901,471	+				-1.0
1,901,511	+				-0.8
1,901,511	+				+0.0
1,901,561	+				+0.6
1,901,561	+				+1.0
1,901,562	-				-2.1
1,901,562	-				+0.0
1,901,565	+				-1.0
1,901,565	+				-1.3
1,901,565	+				-1.0
1,901,636	+				-1.7
1,901,636	+				-0.7
1,901,636	+				-0.8
1,901,636	+				-0.9
1,901,636	+				-0.5
1,901,636	+				+0.7
1,901,636	+				-0.5
1,901,636	+				+0.2
1,901,636	+				+0.5
1,901,636	+				-0.4
1,901,636	+				+0.5
1,901,636	+				-0.3
1,901,636	+				+0.0
1,901,636	+				-1.0
1,901,636	+				-1.0
1,901,637	-				-1.5
1,901,637	-				-1.5
1,901,637	-				-2.1
1,901,637	-				-1.0
1,901,637	-				+0.0
1,901,637	-				-1.0
1,901,637	-				+0.3
1,901,637	-				+0.4
1,901,637	-				-0.8
1,901,637	-				-0.3
1,901,637	-				-0.7
1,901,637	-				-1.1
1,901,637	-				-1.4
1,901,637	-				-1.3
1,901,637	-				-1.1
1,901,637	-				-1.5
1,901,637	-				-0.1
1,901,711	+				-1.0
1,901,711	+				-0.3
1,901,711	+				-1.0
1,901,711	+				-0.5
1,901,712	-				-1.8
1,901,712	-				-1.2
1,901,726	+				-1.3
1,901,727	-				+0.5
1,901,840	+		MPMX19_01818	0.31	-2.2
1,901,840	+		MPMX19_01818	0.31	-1.5
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	-1.2
1,901,840	+		MPMX19_01818	0.31	-1.0
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	+0.6
1,901,840	+		MPMX19_01818	0.31	-1.1
1,901,840	+		MPMX19_01818	0.31	+1.0
1,901,840	+		MPMX19_01818	0.31	-1.0
1,901,840	+		MPMX19_01818	0.31	-2.0
1,901,840	+		MPMX19_01818	0.31	-0.8
1,901,840	+		MPMX19_01818	0.31	+0.6
1,901,840	+		MPMX19_01818	0.31	+0.0
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	-0.9
1,901,840	+		MPMX19_01818	0.31	+1.3
1,901,840	+		MPMX19_01818	0.31	-1.5
1,901,841	-		MPMX19_01818	0.32	-0.3
1,901,841	-		MPMX19_01818	0.32	+0.7
1,901,841	-		MPMX19_01818	0.32	-0.8
1,901,841	-		MPMX19_01818	0.32	+0.0
1,901,841	-		MPMX19_01818	0.32	-0.1
1,901,841	-		MPMX19_01818	0.32	-0.3
1,901,841	-		MPMX19_01818	0.32	-1.1
1,901,841	-		MPMX19_01818	0.32	+0.0
1,901,841	-		MPMX19_01818	0.32	-1.5
1,901,841	-		MPMX19_01818	0.32	-0.4
1,901,841	-		MPMX19_01818	0.32	+0.2
1,901,841	-		MPMX19_01818	0.32	-0.9
1,901,841	-		MPMX19_01818	0.32	+0.4
1,901,841	-		MPMX19_01818	0.32	-0.8
1,901,841	-		MPMX19_01818	0.32	+0.0
1,901,841	-		MPMX19_01818	0.32	-0.8
1,901,841	-		MPMX19_01818	0.32	+0.8
1,901,841	-		MPMX19_01818	0.32	-0.4
1,902,025	+		MPMX19_01818	0.72	-1.0
1,902,025	+		MPMX19_01818	0.72	-0.5
1,902,025	+		MPMX19_01818	0.72	+0.5
1,902,025	+		MPMX19_01818	0.72	-1.0
1,902,026	-		MPMX19_01818	0.73	-0.7
1,902,026	-		MPMX19_01818	0.73	-1.3
1,902,026	-		MPMX19_01818	0.73	-1.4
1,902,026	-		MPMX19_01818	0.73	+0.6
1,902,026	-		MPMX19_01818	0.73	-1.0