Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01465

Experiment: NF_with_fullN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_01464 and MPMX19_01465 are separated by 87 nucleotidesMPMX19_01465 and MPMX19_01466 are separated by 11 nucleotidesMPMX19_01466 and MPMX19_01467 overlap by 4 nucleotides MPMX19_01464: MPMX19_01464 - Endolytic peptidoglycan transglycosylase RlpA, at 1,536,427 to 1,537,398 _01464 MPMX19_01465: MPMX19_01465 - D-alanyl-D-alanine carboxypeptidase DacC, at 1,537,486 to 1,538,688 _01465 MPMX19_01466: MPMX19_01466 - Thymidylate kinase, at 1,538,700 to 1,539,359 _01466 MPMX19_01467: MPMX19_01467 - hypothetical protein, at 1,539,356 to 1,540,486 _01467 Position (kb) 1537 1538 1539Strain fitness (log2 ratio) -3 -2 -1 0 1at 1536.541 kb on + strand, within MPMX19_01464at 1536.541 kb on + strand, within MPMX19_01464at 1536.541 kb on + strand, within MPMX19_01464at 1536.541 kb on + strand, within MPMX19_01464at 1536.541 kb on + strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.542 kb on - strand, within MPMX19_01464at 1536.559 kb on + strand, within MPMX19_01464at 1536.559 kb on + strand, within MPMX19_01464at 1536.580 kb on + strand, within MPMX19_01464at 1536.583 kb on + strand, within MPMX19_01464at 1536.583 kb on + strand, within MPMX19_01464at 1536.584 kb on - strand, within MPMX19_01464at 1536.604 kb on + strand, within MPMX19_01464at 1536.604 kb on + strand, within MPMX19_01464at 1536.631 kb on + strand, within MPMX19_01464at 1536.631 kb on + strand, within MPMX19_01464at 1536.632 kb on - strand, within MPMX19_01464at 1536.676 kb on + strand, within MPMX19_01464at 1536.676 kb on + strand, within MPMX19_01464at 1536.676 kb on + strand, within MPMX19_01464at 1536.676 kb on + strand, within MPMX19_01464at 1536.677 kb on - strand, within MPMX19_01464at 1536.677 kb on - strand, within MPMX19_01464at 1536.677 kb on - strand, within MPMX19_01464at 1536.677 kb on - strand, within MPMX19_01464at 1536.794 kb on - strand, within MPMX19_01464at 1536.794 kb on - strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.872 kb on + strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1536.873 kb on - strand, within MPMX19_01464at 1537.107 kb on + strand, within MPMX19_01464at 1537.108 kb on - strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.177 kb on + strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.178 kb on - strand, within MPMX19_01464at 1537.432 kb on + strandat 1537.432 kb on + strandat 1537.432 kb on + strandat 1537.432 kb on + strandat 1537.432 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strandat 1537.450 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF_with_fullN
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1,536,541 + MPMX19_01464 0.12 -1.2
1,536,541 + MPMX19_01464 0.12 -1.1
1,536,541 + MPMX19_01464 0.12 +0.7
1,536,541 + MPMX19_01464 0.12 -0.8
1,536,541 + MPMX19_01464 0.12 +1.1
1,536,542 - MPMX19_01464 0.12 +0.4
1,536,542 - MPMX19_01464 0.12 -0.0
1,536,542 - MPMX19_01464 0.12 -0.1
1,536,542 - MPMX19_01464 0.12 -0.2
1,536,542 - MPMX19_01464 0.12 -0.3
1,536,542 - MPMX19_01464 0.12 +0.1
1,536,559 + MPMX19_01464 0.14 -0.9
1,536,559 + MPMX19_01464 0.14 +0.5
1,536,580 + MPMX19_01464 0.16 -2.2
1,536,583 + MPMX19_01464 0.16 -0.6
1,536,583 + MPMX19_01464 0.16 -0.1
1,536,584 - MPMX19_01464 0.16 +0.8
1,536,604 + MPMX19_01464 0.18 -1.4
1,536,604 + MPMX19_01464 0.18 +0.1
1,536,631 + MPMX19_01464 0.21 -0.1
1,536,631 + MPMX19_01464 0.21 -1.2
1,536,632 - MPMX19_01464 0.21 +0.1
1,536,676 + MPMX19_01464 0.26 +1.5
1,536,676 + MPMX19_01464 0.26 +0.8
1,536,676 + MPMX19_01464 0.26 -0.5
1,536,676 + MPMX19_01464 0.26 -0.5
1,536,677 - MPMX19_01464 0.26 -2.2
1,536,677 - MPMX19_01464 0.26 -0.7
1,536,677 - MPMX19_01464 0.26 -1.2
1,536,677 - MPMX19_01464 0.26 -0.7
1,536,794 - MPMX19_01464 0.38 -0.5
1,536,794 - MPMX19_01464 0.38 -2.1
1,536,872 + MPMX19_01464 0.46 +0.9
1,536,872 + MPMX19_01464 0.46 -2.8
1,536,872 + MPMX19_01464 0.46 +0.1
1,536,872 + MPMX19_01464 0.46 -0.9
1,536,872 + MPMX19_01464 0.46 -0.1
1,536,872 + MPMX19_01464 0.46 -0.9
1,536,872 + MPMX19_01464 0.46 -0.9
1,536,872 + MPMX19_01464 0.46 -1.9
1,536,872 + MPMX19_01464 0.46 -1.5
1,536,872 + MPMX19_01464 0.46 -2.1
1,536,872 + MPMX19_01464 0.46 -1.1
1,536,872 + MPMX19_01464 0.46 -0.3
1,536,872 + MPMX19_01464 0.46 +0.3
1,536,872 + MPMX19_01464 0.46 +0.7
1,536,872 + MPMX19_01464 0.46 +1.1
1,536,872 + MPMX19_01464 0.46 -0.9
1,536,872 + MPMX19_01464 0.46 +0.1
1,536,872 + MPMX19_01464 0.46 +1.1
1,536,872 + MPMX19_01464 0.46 +0.5
1,536,873 - MPMX19_01464 0.46 -1.0
1,536,873 - MPMX19_01464 0.46 -1.2
1,536,873 - MPMX19_01464 0.46 +0.1
1,536,873 - MPMX19_01464 0.46 -0.1
1,536,873 - MPMX19_01464 0.46 +0.3
1,536,873 - MPMX19_01464 0.46 -1.1
1,536,873 - MPMX19_01464 0.46 -0.3
1,536,873 - MPMX19_01464 0.46 +0.4
1,536,873 - MPMX19_01464 0.46 +0.6
1,537,107 + MPMX19_01464 0.70 +0.1
1,537,108 - MPMX19_01464 0.70 -1.4
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -0.3
1,537,177 + MPMX19_01464 0.77 +1.5
1,537,177 + MPMX19_01464 0.77 -1.2
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -1.2
1,537,177 + MPMX19_01464 0.77 -0.2
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -2.5
1,537,177 + MPMX19_01464 0.77 -1.2
1,537,177 + MPMX19_01464 0.77 -0.1
1,537,177 + MPMX19_01464 0.77 -0.2
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 +0.5
1,537,177 + MPMX19_01464 0.77 -0.4
1,537,177 + MPMX19_01464 0.77 -1.5
1,537,177 + MPMX19_01464 0.77 -1.8
1,537,177 + MPMX19_01464 0.77 -1.3
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 +0.2
1,537,177 + MPMX19_01464 0.77 +0.5
1,537,177 + MPMX19_01464 0.77 +0.4
1,537,177 + MPMX19_01464 0.77 -1.2
1,537,177 + MPMX19_01464 0.77 -1.0
1,537,177 + MPMX19_01464 0.77 -2.1
1,537,177 + MPMX19_01464 0.77 +0.4
1,537,177 + MPMX19_01464 0.77 -0.1
1,537,177 + MPMX19_01464 0.77 -3.4
1,537,177 + MPMX19_01464 0.77 -0.7
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.6
1,537,177 + MPMX19_01464 0.77 -0.4
1,537,177 + MPMX19_01464 0.77 +0.4
1,537,177 + MPMX19_01464 0.77 +0.5
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.1
1,537,177 + MPMX19_01464 0.77 -2.2
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -0.7
1,537,177 + MPMX19_01464 0.77 -2.2
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 +0.4
1,537,177 + MPMX19_01464 0.77 -0.7
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 +0.8
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -0.7
1,537,177 + MPMX19_01464 0.77 -1.9
1,537,177 + MPMX19_01464 0.77 -0.7
1,537,177 + MPMX19_01464 0.77 -1.7
1,537,177 + MPMX19_01464 0.77 -0.2
1,537,177 + MPMX19_01464 0.77 -1.5
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 -0.2
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.9
1,537,177 + MPMX19_01464 0.77 -0.1
1,537,177 + MPMX19_01464 0.77 -0.1
1,537,177 + MPMX19_01464 0.77 +1.4
1,537,177 + MPMX19_01464 0.77 +0.1
1,537,177 + MPMX19_01464 0.77 -1.5
1,537,177 + MPMX19_01464 0.77 -1.2
1,537,177 + MPMX19_01464 0.77 -3.0
1,537,177 + MPMX19_01464 0.77 +0.3
1,537,177 + MPMX19_01464 0.77 -1.9
1,537,177 + MPMX19_01464 0.77 +0.5
1,537,177 + MPMX19_01464 0.77 -0.8
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,177 + MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 -0.1
1,537,178 - MPMX19_01464 0.77 -1.5
1,537,178 - MPMX19_01464 0.77 -1.4
1,537,178 - MPMX19_01464 0.77 -0.9
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 +0.6
1,537,178 - MPMX19_01464 0.77 -0.6
1,537,178 - MPMX19_01464 0.77 -0.0
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 -0.6
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 +0.5
1,537,178 - MPMX19_01464 0.77 -0.6
1,537,178 - MPMX19_01464 0.77 -0.9
1,537,178 - MPMX19_01464 0.77 -1.4
1,537,178 - MPMX19_01464 0.77 -1.6
1,537,178 - MPMX19_01464 0.77 -1.7
1,537,178 - MPMX19_01464 0.77 -1.1
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 -2.3
1,537,178 - MPMX19_01464 0.77 +0.8
1,537,178 - MPMX19_01464 0.77 -1.5
1,537,178 - MPMX19_01464 0.77 -0.7
1,537,178 - MPMX19_01464 0.77 +0.5
1,537,178 - MPMX19_01464 0.77 -0.2
1,537,178 - MPMX19_01464 0.77 -1.2
1,537,178 - MPMX19_01464 0.77 -0.2
1,537,178 - MPMX19_01464 0.77 -1.7
1,537,178 - MPMX19_01464 0.77 -1.5
1,537,178 - MPMX19_01464 0.77 -0.9
1,537,178 - MPMX19_01464 0.77 -0.5
1,537,178 - MPMX19_01464 0.77 -1.5
1,537,178 - MPMX19_01464 0.77 -0.9
1,537,178 - MPMX19_01464 0.77 +0.7
1,537,178 - MPMX19_01464 0.77 -0.4
1,537,178 - MPMX19_01464 0.77 +0.1
1,537,178 - MPMX19_01464 0.77 +1.4
1,537,178 - MPMX19_01464 0.77 +0.2
1,537,178 - MPMX19_01464 0.77 +0.1
1,537,178 - MPMX19_01464 0.77 -0.9
1,537,178 - MPMX19_01464 0.77 +0.6
1,537,432 + -0.3
1,537,432 + +0.1
1,537,432 + +0.5
1,537,432 + -2.1
1,537,432 + +0.7
1,537,450 + -0.7
1,537,450 + -1.9
1,537,450 + +1.7
1,537,450 + +0.2
1,537,450 + -0.5
1,537,450 + -0.8
1,537,450 + -1.0
1,537,450 + -1.7
1,537,450 + -1.1
1,537,450 + -0.9
1,537,450 + -2.2
1,537,450 + -1.5
1,537,450 + -1.8
1,537,450 + -0.6
1,537,450 + -2.5
1,537,450 + +0.7
1,537,450 + -0.5
1,537,450 + +0.3
1,537,450 + -0.2

Or see this region's nucleotide sequence