Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00578 and MPMX19_00579 are separated by 44 nucleotides MPMX19_00579 and MPMX19_00580 are separated by 56 nucleotides MPMX19_00580 and MPMX19_00581 are separated by 33 nucleotides MPMX19_00581 and MPMX19_00582 are separated by 2 nucleotides MPMX19_00582 and MPMX19_00583 are separated by 38 nucleotides
MPMX19_00578: MPMX19_00578 - Glutamate--cysteine ligase EgtA, at 592,216 to 593,580
_00578
MPMX19_00579: MPMX19_00579 - Ferredoxin-3, at 593,625 to 593,918
_00579
MPMX19_00580: MPMX19_00580 - hypothetical protein, at 593,975 to 594,175
_00580
MPMX19_00581: MPMX19_00581 - hypothetical protein, at 594,209 to 594,664
_00581
MPMX19_00582: MPMX19_00582 - hypothetical protein, at 594,667 to 595,065
_00582
MPMX19_00583: MPMX19_00583 - Nitrogenase molybdenum-iron protein beta chain, at 595,104 to 596,486
_00583
Position (kb) 594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 593.569 kb on + strand at 593.570 kb on - strand at 593.570 kb on - strand at 593.570 kb on - strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.576 kb on - strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.950 kb on - strand at 593.964 kb on + strand at 593.964 kb on + strand at 593.964 kb on + strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.976 kb on + strand at 593.977 kb on - strand at 593.977 kb on - strand at 593.977 kb on - strand at 593.977 kb on - strand at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.232 kb on - strand at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.989 kb on + strand, within MPMX19_00582 at 595.301 kb on + strand, within MPMX19_00583 at 595.301 kb on + strand, within MPMX19_00583 at 595.301 kb on + strand, within MPMX19_00583 at 595.302 kb on - strand, within MPMX19_00583 at 595.302 kb on - strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.513 kb on + strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.514 kb on - strand, within MPMX19_00583 at 595.558 kb on + strand, within MPMX19_00583 at 595.558 kb on + strand, within MPMX19_00583 at 595.558 kb on + strand, within MPMX19_00583 at 595.558 kb on + strand, within MPMX19_00583 at 595.558 kb on + strand, within MPMX19_00583 at 595.559 kb on - strand, within MPMX19_00583 at 595.559 kb on - strand, within MPMX19_00583
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 593,569 + -0.7 593,570 - -1.5 593,570 - -0.5 593,570 - -0.5 593,575 + +0.1 593,575 + +0.1 593,575 + -0.8 593,575 + -1.5 593,576 - -0.3 593,626 + -0.3 593,626 + -1.4 593,626 + -0.9 593,626 + -1.0 593,626 + +0.7 593,626 + -1.7 593,626 + +0.7 593,626 + +0.8 593,627 - +1.3 593,627 - -0.5 593,627 - -0.6 593,627 - -0.2 593,627 - -2.3 593,950 - +0.3 593,964 + -2.6 593,964 + -0.2 593,964 + -0.1 593,965 - +0.6 593,965 - -0.1 593,965 - -0.9 593,965 - +2.1 593,976 + -0.3 593,977 - +0.4 593,977 - -1.1 593,977 - +0.1 593,977 - -0.7 594,036 + MPMX19_00580 0.30 +0.8 594,036 + MPMX19_00580 0.30 +0.1 594,036 + MPMX19_00580 0.30 -0.1 594,036 + MPMX19_00580 0.30 -0.8 594,036 + MPMX19_00580 0.30 -0.8 594,036 + MPMX19_00580 0.30 -1.1 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 +0.3 594,037 - MPMX19_00580 0.31 -0.9 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 -1.2 594,037 - MPMX19_00580 0.31 -0.5 594,037 - MPMX19_00580 0.31 +1.1 594,037 - MPMX19_00580 0.31 -0.1 594,037 - MPMX19_00580 0.31 -1.1 594,037 - MPMX19_00580 0.31 +0.7 594,037 - MPMX19_00580 0.31 +2.9 594,037 - MPMX19_00580 0.31 +0.5 594,232 - +0.3 594,456 + MPMX19_00581 0.54 -1.5 594,456 + MPMX19_00581 0.54 +1.8 594,456 + MPMX19_00581 0.54 -0.3 594,456 + MPMX19_00581 0.54 -0.7 594,456 + MPMX19_00581 0.54 -0.2 594,456 + MPMX19_00581 0.54 -1.8 594,456 + MPMX19_00581 0.54 +0.5 594,456 + MPMX19_00581 0.54 -0.9 594,457 - MPMX19_00581 0.54 +0.7 594,457 - MPMX19_00581 0.54 -0.5 594,457 - MPMX19_00581 0.54 +1.4 594,457 - MPMX19_00581 0.54 -0.5 594,457 - MPMX19_00581 0.54 -0.6 594,457 - MPMX19_00581 0.54 -1.3 594,457 - MPMX19_00581 0.54 +0.4 594,457 - MPMX19_00581 0.54 -0.4 594,457 - MPMX19_00581 0.54 -0.3 594,457 - MPMX19_00581 0.54 +0.3 594,457 - MPMX19_00581 0.54 -2.6 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 -0.2 594,585 + MPMX19_00581 0.82 -0.3 594,585 + MPMX19_00581 0.82 -0.3 594,585 + MPMX19_00581 0.82 -1.3 594,585 + MPMX19_00581 0.82 -0.5 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 +1.1 594,585 + MPMX19_00581 0.82 -0.6 594,585 + MPMX19_00581 0.82 -0.7 594,585 + MPMX19_00581 0.82 -0.7 594,585 + MPMX19_00581 0.82 -1.1 594,585 + MPMX19_00581 0.82 -0.5 594,585 + MPMX19_00581 0.82 +0.1 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 -0.7 594,585 + MPMX19_00581 0.82 -0.3 594,585 + MPMX19_00581 0.82 -0.1 594,585 + MPMX19_00581 0.82 -1.5 594,586 - MPMX19_00581 0.83 -1.5 594,586 - MPMX19_00581 0.83 -1.7 594,586 - MPMX19_00581 0.83 +1.1 594,586 - MPMX19_00581 0.83 -2.3 594,586 - MPMX19_00581 0.83 -0.1 594,586 - MPMX19_00581 0.83 -2.1 594,586 - MPMX19_00581 0.83 -1.7 594,586 - MPMX19_00581 0.83 -0.2 594,586 - MPMX19_00581 0.83 -0.9 594,586 - MPMX19_00581 0.83 -0.9 594,586 - MPMX19_00581 0.83 -0.6 594,586 - MPMX19_00581 0.83 -3.0 594,586 - MPMX19_00581 0.83 +0.8 594,586 - MPMX19_00581 0.83 -0.8 594,586 - MPMX19_00581 0.83 -0.9 594,586 - MPMX19_00581 0.83 -0.7 594,586 - MPMX19_00581 0.83 +1.1 594,586 - MPMX19_00581 0.83 -0.2 594,586 - MPMX19_00581 0.83 -0.1 594,586 - MPMX19_00581 0.83 -0.1 594,586 - MPMX19_00581 0.83 -1.2 594,586 - MPMX19_00581 0.83 -0.7 594,586 - MPMX19_00581 0.83 +0.1 594,863 + MPMX19_00582 0.49 -0.3 594,863 + MPMX19_00582 0.49 +0.0 594,863 + MPMX19_00582 0.49 +0.3 594,863 + MPMX19_00582 0.49 -1.3 594,863 + MPMX19_00582 0.49 -0.2 594,863 + MPMX19_00582 0.49 -0.3 594,863 + MPMX19_00582 0.49 +3.7 594,863 + MPMX19_00582 0.49 -0.5 594,863 + MPMX19_00582 0.49 -0.3 594,863 + MPMX19_00582 0.49 -0.5 594,863 + MPMX19_00582 0.49 -0.2 594,863 + MPMX19_00582 0.49 +1.1 594,863 + MPMX19_00582 0.49 -0.5 594,863 + MPMX19_00582 0.49 +0.1 594,863 + MPMX19_00582 0.49 +0.7 594,863 + MPMX19_00582 0.49 +0.1 594,863 + MPMX19_00582 0.49 -0.4 594,864 - MPMX19_00582 0.49 +0.3 594,864 - MPMX19_00582 0.49 +1.7 594,864 - MPMX19_00582 0.49 +0.1 594,864 - MPMX19_00582 0.49 +1.4 594,864 - MPMX19_00582 0.49 +1.1 594,864 - MPMX19_00582 0.49 -0.3 594,864 - MPMX19_00582 0.49 -1.6 594,864 - MPMX19_00582 0.49 +0.1 594,864 - MPMX19_00582 0.49 +1.7 594,864 - MPMX19_00582 0.49 +0.2 594,864 - MPMX19_00582 0.49 +1.1 594,864 - MPMX19_00582 0.49 +0.5 594,989 + MPMX19_00582 0.81 +0.3 595,301 + MPMX19_00583 0.14 -0.7 595,301 + MPMX19_00583 0.14 -1.3 595,301 + MPMX19_00583 0.14 -0.9 595,302 - MPMX19_00583 0.14 -0.3 595,302 - MPMX19_00583 0.14 -0.2 595,513 + MPMX19_00583 0.30 -0.9 595,513 + MPMX19_00583 0.30 +0.2 595,513 + MPMX19_00583 0.30 +0.1 595,513 + MPMX19_00583 0.30 +0.4 595,513 + MPMX19_00583 0.30 +0.1 595,513 + MPMX19_00583 0.30 -0.7 595,513 + MPMX19_00583 0.30 -0.1 595,513 + MPMX19_00583 0.30 -1.9 595,513 + MPMX19_00583 0.30 -0.9 595,513 + MPMX19_00583 0.30 -0.3 595,513 + MPMX19_00583 0.30 +0.1 595,513 + MPMX19_00583 0.30 +0.2 595,513 + MPMX19_00583 0.30 -0.6 595,513 + MPMX19_00583 0.30 -0.9 595,513 + MPMX19_00583 0.30 -0.0 595,513 + MPMX19_00583 0.30 -0.9 595,513 + MPMX19_00583 0.30 -0.9 595,514 - MPMX19_00583 0.30 -0.2 595,514 - MPMX19_00583 0.30 +1.1 595,514 - MPMX19_00583 0.30 -1.4 595,514 - MPMX19_00583 0.30 +1.7 595,514 - MPMX19_00583 0.30 +3.1 595,514 - MPMX19_00583 0.30 +0.3 595,514 - MPMX19_00583 0.30 +1.9 595,514 - MPMX19_00583 0.30 +0.5 595,514 - MPMX19_00583 0.30 +0.1 595,514 - MPMX19_00583 0.30 +0.1 595,514 - MPMX19_00583 0.30 +0.1 595,514 - MPMX19_00583 0.30 -0.5 595,514 - MPMX19_00583 0.30 -1.3 595,558 + MPMX19_00583 0.33 -1.0 595,558 + MPMX19_00583 0.33 -1.1 595,558 + MPMX19_00583 0.33 -0.3 595,558 + MPMX19_00583 0.33 +1.1 595,558 + MPMX19_00583 0.33 -0.9 595,559 - MPMX19_00583 0.33 +0.1 595,559 - MPMX19_00583 0.33 +0.6
Or see this region's nucleotide sequence