Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06527

Experiment: NF_with_fullN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06525 and MPMX19_06526 are separated by 10 nucleotidesMPMX19_06526 and MPMX19_06527 overlap by 4 nucleotidesMPMX19_06527 and MPMX19_06528 overlap by 4 nucleotides MPMX19_06525: MPMX19_06525 - Adenine deaminase, at 311,848 to 313,527 _06525 MPMX19_06526: MPMX19_06526 - Putative aliphatic sulfonates transport permease protein SsuC, at 313,538 to 314,431 _06526 MPMX19_06527: MPMX19_06527 - Bicarbonate transport ATP-binding protein CmpD, at 314,428 to 315,225 _06527 MPMX19_06528: MPMX19_06528 - hypothetical protein, at 315,222 to 316,268 _06528 Position (kb) 314 315 316Strain fitness (log2 ratio) -2 -1 0 1 2at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.683 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.769 kb on + strand, within MPMX19_06526at 313.770 kb on - strand, within MPMX19_06526at 313.770 kb on - strand, within MPMX19_06526at 313.770 kb on - strand, within MPMX19_06526at 313.770 kb on - strand, within MPMX19_06526at 313.852 kb on - strand, within MPMX19_06526at 314.338 kb on + strand, within MPMX19_06526at 314.504 kb on + strandat 314.504 kb on + strandat 314.505 kb on - strandat 314.505 kb on - strandat 314.964 kb on - strand, within MPMX19_06527at 314.964 kb on - strand, within MPMX19_06527at 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.183 kb on - strandat 315.776 kb on - strand, within MPMX19_06528at 315.776 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.789 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.791 kb on - strand, within MPMX19_06528at 315.901 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 315.910 kb on + strand, within MPMX19_06528at 316.193 kb on + strandat 316.194 kb on - strandat 316.194 kb on - strandat 316.194 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF_with_fullN
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313,683 + MPMX19_06526 0.16 -2.4
313,683 + MPMX19_06526 0.16 +1.9
313,683 + MPMX19_06526 0.16 -0.4
313,683 + MPMX19_06526 0.16 +1.2
313,683 + MPMX19_06526 0.16 -0.3
313,683 + MPMX19_06526 0.16 +1.5
313,683 + MPMX19_06526 0.16 -0.0
313,683 + MPMX19_06526 0.16 -0.8
313,683 + MPMX19_06526 0.16 -0.2
313,769 + MPMX19_06526 0.26 -1.2
313,769 + MPMX19_06526 0.26 -0.8
313,769 + MPMX19_06526 0.26 -1.4
313,769 + MPMX19_06526 0.26 -0.4
313,769 + MPMX19_06526 0.26 +0.4
313,769 + MPMX19_06526 0.26 -0.1
313,770 - MPMX19_06526 0.26 -0.2
313,770 - MPMX19_06526 0.26 -1.2
313,770 - MPMX19_06526 0.26 +0.4
313,770 - MPMX19_06526 0.26 +1.6
313,852 - MPMX19_06526 0.35 +0.4
314,338 + MPMX19_06526 0.89 -2.0
314,504 + +0.2
314,504 + -0.4
314,505 - -0.8
314,505 - +0.7
314,964 - MPMX19_06527 0.67 -1.4
314,964 - MPMX19_06527 0.67 +0.1
315,183 - -0.2
315,183 - +0.4
315,183 - -0.3
315,183 - -0.0
315,183 - +0.4
315,183 - +0.2
315,183 - -0.2
315,183 - +1.6
315,776 - MPMX19_06528 0.53 -0.9
315,776 - MPMX19_06528 0.53 +0.6
315,789 - MPMX19_06528 0.54 -0.4
315,789 - MPMX19_06528 0.54 +0.4
315,789 - MPMX19_06528 0.54 +0.2
315,789 - MPMX19_06528 0.54 +0.6
315,789 - MPMX19_06528 0.54 -0.8
315,789 - MPMX19_06528 0.54 -1.4
315,789 - MPMX19_06528 0.54 -0.2
315,789 - MPMX19_06528 0.54 +0.1
315,789 - MPMX19_06528 0.54 +0.4
315,789 - MPMX19_06528 0.54 +0.2
315,789 - MPMX19_06528 0.54 -0.4
315,789 - MPMX19_06528 0.54 +0.7
315,789 - MPMX19_06528 0.54 +0.6
315,789 - MPMX19_06528 0.54 +1.6
315,789 - MPMX19_06528 0.54 +0.2
315,789 - MPMX19_06528 0.54 -0.2
315,789 - MPMX19_06528 0.54 -1.0
315,789 - MPMX19_06528 0.54 -0.4
315,789 - MPMX19_06528 0.54 -0.8
315,789 - MPMX19_06528 0.54 -2.5
315,789 - MPMX19_06528 0.54 -0.6
315,789 - MPMX19_06528 0.54 -0.6
315,789 - MPMX19_06528 0.54 +0.0
315,789 - MPMX19_06528 0.54 +0.3
315,789 - MPMX19_06528 0.54 +1.3
315,789 - MPMX19_06528 0.54 -1.2
315,789 - MPMX19_06528 0.54 +0.2
315,789 - MPMX19_06528 0.54 -0.2
315,789 - MPMX19_06528 0.54 -0.2
315,789 - MPMX19_06528 0.54 +0.2
315,789 - MPMX19_06528 0.54 +0.8
315,789 - MPMX19_06528 0.54 -0.4
315,789 - MPMX19_06528 0.54 +0.4
315,791 - MPMX19_06528 0.54 +1.2
315,791 - MPMX19_06528 0.54 +0.6
315,791 - MPMX19_06528 0.54 -0.4
315,791 - MPMX19_06528 0.54 +1.7
315,791 - MPMX19_06528 0.54 -1.6
315,791 - MPMX19_06528 0.54 -0.8
315,791 - MPMX19_06528 0.54 +1.2
315,791 - MPMX19_06528 0.54 +0.3
315,791 - MPMX19_06528 0.54 -0.4
315,791 - MPMX19_06528 0.54 +0.6
315,791 - MPMX19_06528 0.54 +0.2
315,791 - MPMX19_06528 0.54 -0.0
315,901 + MPMX19_06528 0.65 -2.3
315,910 + MPMX19_06528 0.66 -0.6
315,910 + MPMX19_06528 0.66 +0.2
315,910 + MPMX19_06528 0.66 -1.0
315,910 + MPMX19_06528 0.66 +0.6
315,910 + MPMX19_06528 0.66 +0.6
315,910 + MPMX19_06528 0.66 +0.9
315,910 + MPMX19_06528 0.66 -0.8
315,910 + MPMX19_06528 0.66 -0.8
316,193 + -0.3
316,194 - +0.6
316,194 - +0.4
316,194 - +0.1

Or see this region's nucleotide sequence